Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31875
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0309 - 23987669-23988042,23989485-23989560 83 1e-16
07_03_1738 - 29141829-29141989,29142112-29142343,29142751-291427... 82 2e-16
03_02_0817 + 11492699-11492774,11493605-11493978 82 2e-16
01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097 82 2e-16
01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651 81 7e-16
01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858 79 2e-15
12_01_0207 - 1559491-1559544,1559806-1560161,1560244-1560363,156... 70 1e-12
11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348 62 2e-10
12_02_1027 + 25496311-25496811 57 7e-09
08_01_0121 - 963297-963743 57 1e-08
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 52 4e-07
11_06_0212 - 21319441-21319498,21319737-21319867,21319944-213200... 50 1e-06
01_05_0049 + 17577358-17577993 44 6e-05
10_07_0048 - 12354566-12354639,12355563-12355665,12355781-123559... 43 2e-04
05_07_0229 - 28537784-28538296 40 9e-04
07_03_1286 + 25482632-25482685,25483948-25484145,25484242-254844... 39 0.003
05_03_0020 - 7433619-7434089 36 0.019
01_07_0179 - 41814886-41815074,41815172-41815222,41815365-418154... 34 0.078
01_05_0628 - 23806901-23807650 33 0.14
05_05_0308 - 23985165-23985556,23985624-23985699 32 0.24
04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251 32 0.31
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 32 0.31
05_04_0127 - 18262499-18263104 31 0.55
03_06_0014 - 31012116-31012229,31012773-31012985,31013058-310131... 30 1.3
12_01_0217 + 1647319-1648327,1648462-1648577,1648650-1648817,164... 29 1.7
11_01_0216 + 1693889-1694897,1695034-1695149,1695222-1695389,169... 29 1.7
05_06_0200 + 26329211-26329251,26329471-26329564,26329691-263297... 29 1.7
05_02_0134 + 6954760-6955434 29 2.2
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 29 2.2
03_06_0408 - 33722741-33722893,33723174-33723350,33723798-337239... 29 2.2
03_03_0278 - 16126803-16129049 29 2.2
02_02_0358 + 9373440-9373500,9375106-9375632 29 2.2
02_02_0356 + 9336558-9337091 29 2.2
02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915 29 2.2
01_07_0217 + 42072475-42072915 29 2.2
11_06_0653 + 25911162-25911272,25911648-25911694,25912877-259133... 29 2.9
07_01_0848 + 6888773-6888853,6888965-6889336 29 2.9
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 29 2.9
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 28 3.9
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 28 3.9
02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,188... 28 3.9
09_04_0098 - 14580949-14581176,14581213-14581470 28 5.1
05_06_0212 + 26410330-26410419,26410562-26410846,26411005-264112... 28 5.1
04_04_0460 - 25378860-25379409,25379515-25379644,25380733-25380898 28 5.1
01_03_0294 - 14745886-14745944,14745981-14746036,14746401-147464... 28 5.1
01_01_0226 - 1930276-1930821 28 5.1
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783... 27 6.8
07_01_0302 - 2169271-2169531,2169778-2169828,2169929-2170381 27 8.9
05_01_0538 + 4646772-4647059,4647462-4647542,4647819-4647890,464... 27 8.9
03_01_0179 - 1443508-1443624,1443712-1443773,1444904-1444971,144... 27 8.9
>05_05_0309 - 23987669-23988042,23989485-23989560
Length = 149
Score = 83.0 bits (196), Expect = 1e-16
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Frame = +2
Query: 32 MSD-LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 208
M+D L+ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 209 XXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 385
FL + AKK KD + E+ E +++DK++NG + AEL H + LGEKL
Sbjct: 61 NGTIDFPEFLNL--MAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT 118
Query: 386 DSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 481
D EV E+ ++ D DG I Y F+K +MA
Sbjct: 119 DEEVDEMIREA--DVDGDGQINYEEFVKVMMA 148
>07_03_1738 -
29141829-29141989,29142112-29142343,29142751-29142792,
29143312-29143410,29143575-29143667,29143742-29143876,
29144251-29144290,29144475-29144844,29146575-29146650
Length = 415
Score = 82.2 bits (194), Expect = 2e-16
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Frame = +2
Query: 32 MSD-LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 208
M+D L+ + + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 209 XXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 385
FL + A+K KD + E+ E +++DK++NG + AEL H + LGEKL
Sbjct: 61 NGTIDFPEFLNL--MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT 118
Query: 386 DSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 481
D EV E+ ++ D DG I Y F+K +MA
Sbjct: 119 DEEVDEMIREA--DVDGDGQINYEEFVKVMMA 148
>03_02_0817 + 11492699-11492774,11493605-11493978
Length = 149
Score = 82.2 bits (194), Expect = 2e-16
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Frame = +2
Query: 32 MSD-LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 208
M+D L+ + + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 209 XXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 385
FL + A+K KD + E+ E +++DK++NG + AEL H + LGEKL
Sbjct: 61 NGTIDFPEFLNL--MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT 118
Query: 386 DSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 481
D EV E+ ++ D DG I Y F+K +MA
Sbjct: 119 DEEVDEMIREA--DVDGDGQINYEEFVKVMMA 148
>01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097
Length = 171
Score = 82.2 bits (194), Expect = 2e-16
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Frame = +2
Query: 32 MSD-LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 208
M+D L+ + + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 209 XXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 385
FL + A+K KD + E+ E +++DK++NG + AEL H + LGEKL
Sbjct: 61 NGTIDFPEFLNL--MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT 118
Query: 386 DSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 481
D EV E+ ++ D DG I Y F+K +MA
Sbjct: 119 DEEVEEMIREA--DVDGDGQINYDEFVKVMMA 148
>01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651
Length = 187
Score = 80.6 bits (190), Expect = 7e-16
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +2
Query: 32 MSD-LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 208
M+D LS+ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLSEEQIGEFREAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMISEVDTDS 60
Query: 209 XXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 385
FL + ++ +DKD + E+ E +++DK++NG + EL H + +GE+L
Sbjct: 61 NGNIEFKEFLGLMARKLRDKD--SEEELKEAFRVFDKDQNGFISATELRHVMANIGERLT 118
Query: 386 DSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA*K 487
D EV E+ + D DG I Y F+K +MA K
Sbjct: 119 DEEVGEMISEA--DVDGDGQINYEEFVKCMMAKK 150
>01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858
Length = 146
Score = 79.0 bits (186), Expect = 2e-15
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Frame = +2
Query: 32 MSD-LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 208
M+D L+ + + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 209 XXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 385
FL + A+K KD + E+ E +++DK++NG + AEL H + LGEKL
Sbjct: 61 NGTIDFPEFLNL--MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT 118
Query: 386 DSEVAEVTKDCMDPEDDDGMIPYAAFLK 469
D EV E+ ++ D DG I Y F+K
Sbjct: 119 DEEVDEMIREA--DVDGDGQINYEEFVK 144
>12_01_0207 -
1559491-1559544,1559806-1560161,1560244-1560363,
1561523-1561568,1561741-1561858,1561981-1562093,
1562586-1562658,1562743-1562882,1563005-1563075,
1563228-1563396,1563594-1563659,1564052-1564150,
1564271-1564444,1564720-1564798,1564901-1565007,
1565391-1565435
Length = 609
Score = 70.1 bits (164), Expect = 1e-12
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Frame = +2
Query: 32 MSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXX 211
M L+K + AF+++D +G G I + LG ++ +L +PT A +
Sbjct: 450 MDHLTKEQIAEFREAFNLFDKDGDGTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGS 509
Query: 212 XXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDD 388
FL + A+K +D GA +D + +++DK++NG + EL H + L + L D
Sbjct: 510 GSIEFEEFLGLL--ARKLRDTGAEDDIRDAFRVFDKDQNGFITPDELRHVMANLSDPLSD 567
Query: 389 SEVAEVTKDCMDPEDDDGMIPYAAFLK 469
E+A++ + D DG I Y FLK
Sbjct: 568 DELADMLHEA--DSDGDGQINYNEFLK 592
>11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348
Length = 205
Score = 62.5 bits (145), Expect = 2e-10
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = +2
Query: 104 GKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAY 280
G I + LG ++ +L +PT A + FL + A+K +D GA
Sbjct: 31 GTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGSGSIEFEEFLGLL--ARKLRDTGAE 88
Query: 281 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 460
+D E +++DK++NG + EL H + LG+ L D E+A++ + D DG I Y
Sbjct: 89 DDIREAFRVFDKDQNGFITPDELRHVMANLGDPLSDDELADMLHEA--DSDGDGQINYNE 146
Query: 461 FLKKVMA 481
FLK +MA
Sbjct: 147 FLKVMMA 153
>12_02_1027 + 25496311-25496811
Length = 166
Score = 57.2 bits (132), Expect = 7e-09
Identities = 26/73 (35%), Positives = 45/73 (61%)
Frame = +2
Query: 260 DKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDD 439
D A E+ E K++DK+++GL+ AEL H +++LGEKL D EV ++ ++ D D
Sbjct: 92 DSGDAADEELREAFKVFDKDQDGLISAAELRHVMISLGEKLTDEEVEQMIREA--DLDGD 149
Query: 440 GMIPYAAFLKKVM 478
G + + F++ +M
Sbjct: 150 GQVNFDEFVRMMM 162
Score = 33.9 bits (74), Expect = 0.078
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +2
Query: 284 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 463
+F E +DK+ +G + EL + +LG+ E+AE+ +D D +G I +A F
Sbjct: 15 EFRETFAFFDKDGDGCITLEELDTVVRSLGQTPTREELAEMIRDV--DVDGNGTIEFAEF 72
Query: 464 LKKVMA*KTSQ 496
L +MA K S+
Sbjct: 73 L-ALMARKASR 82
>08_01_0121 - 963297-963743
Length = 148
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/148 (27%), Positives = 70/148 (47%)
Frame = +2
Query: 38 DLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXX 217
+LS+ V AFS++D +G G+I LG L+R+L NPT A +
Sbjct: 5 ELSEEQVASMREAFSLFDTDGDGRIAPSELGVLMRSLGGNPTQAQLRDIAAQEKLTAPFD 64
Query: 218 XXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEV 397
+ + + + D ++ DK+ +G + A+L H L ++GEKL+ E
Sbjct: 65 FPRFLDLMRAHLRPEPFDRPLRD---AFRVLDKDASGTVSVADLRHVLTSIGEKLEPHEF 121
Query: 398 AEVTKDCMDPEDDDGMIPYAAFLKKVMA 481
E ++ +D DG I Y F+++++A
Sbjct: 122 DEWIRE-VDVA-PDGTIRYDDFIRRIVA 147
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 51.6 bits (118), Expect = 4e-07
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
Frame = +2
Query: 32 MSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXX 211
M L+ + AF ++D G G I L + R+L PT +
Sbjct: 240 MEGLTSEQMVAFQEAFLLFDKNGDGCITLEELAAVTRSLGLEPTDQELNDMMREVDTDGN 299
Query: 212 XXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDD 388
FL + A+K KD E+ E ++ DK++NG + EL + LGEK+ D
Sbjct: 300 GIIDFQEFLSLI--ARKMKDGDGDEELKEAFEVLDKDQNGFISPTELRTVMTNLGEKMTD 357
Query: 389 SEVAEVTKDCMDPEDDDGMIPYAAFL 466
EV ++ ++ D DG + Y F+
Sbjct: 358 EEVEQMIREA--DTDGDGQVNYDEFV 381
>11_06_0212 -
21319441-21319498,21319737-21319867,21319944-21320033,
21320141-21320298,21320646-21320721
Length = 170
Score = 50.0 bits (114), Expect = 1e-06
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Frame = +2
Query: 35 SDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXX 214
S L++ + AFS++D G I L +L L P+ +
Sbjct: 3 SHLNEQQISDFRDAFSLFDKNNDGCISREELATVLTRLGMAPSQEDLQDMIVAVDEDGNG 62
Query: 215 XXXXX-FLPIYSQAKKDKDQGAYEDFL-ECLKLYDKNENGLMLGAELTHTLLALGEKLDD 388
FL I + + D+G E+ L + +++DK++NG + EL+ + +LGE++ +
Sbjct: 63 TIEFDEFLAIMKKKLYENDKGDDEEELRKAFRIFDKDDNGFISRNELSMVMASLGEEMTE 122
Query: 389 SEVAEVTKDCMDPEDDDGMIPYAAFLKKVM 478
E+ ++ K ++DG + Y F K+VM
Sbjct: 123 DEIDDMMKAA--DSNNDGQVDYEEF-KRVM 149
>01_05_0049 + 17577358-17577993
Length = 211
Score = 44.4 bits (100), Expect = 6e-05
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Frame = +2
Query: 77 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAK 256
F +D G G + LG LLR+L P+ + +
Sbjct: 69 FRSFDRNGDGSLTQLELGSLLRSLGLKPSTDELDSLIQRADTNSNGLIEFSEFVALVAPE 128
Query: 257 KDKDQGAY-EDFLECL-KLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 430
D+ Y ED + L ++D++ NG + AEL H++ LG L E+ + K+
Sbjct: 129 LLYDRAPYSEDQIRRLFNIFDRDGNGFITAAELAHSMAKLGHALTVKELTGMIKEA--DT 186
Query: 431 DDDGMIPYAAFLKKVMA 481
D DG I + F + + A
Sbjct: 187 DGDGRISFQEFSRAITA 203
>10_07_0048 -
12354566-12354639,12355563-12355665,12355781-12355933,
12356105-12356132,12356414-12356450,12356563-12356746
Length = 192
Score = 42.7 bits (96), Expect = 2e-04
Identities = 35/155 (22%), Positives = 60/155 (38%)
Frame = +2
Query: 5 GGNRQTPHKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXX 184
G R+ + L+ + AF ++D +G G ID L +RAL T I
Sbjct: 29 GYRREKQVRKKRLTAQKRKEIKEAFDLFDTDGSGTIDPKELNVAMRALGFEMTPEQIHQM 88
Query: 185 XXXXXXXXXXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLL 364
++ K ++ A E+ + K+ DK+ NG + ++ +
Sbjct: 89 IAEVDKDGSGTIDFDEF-VHMMTDKMGERDAREELNKAFKIIDKDNNGKISDVDIQRLAI 147
Query: 365 ALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 469
GE EV E+ + E+ DG + + FLK
Sbjct: 148 ETGEPFTLDEVREMIEAA--DENGDGEVDHEEFLK 180
>05_07_0229 - 28537784-28538296
Length = 170
Score = 40.3 bits (90), Expect = 9e-04
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 5/134 (3%)
Frame = +2
Query: 77 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFL-----PI 241
F +D G G + L LLR+L PT + L P+
Sbjct: 27 FRRFDMNGDGSLTQLELAALLRSLGLRPTGDEVHALLAGMDANGNGSVEFDELAAAIAPV 86
Query: 242 YSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCM 421
+ DQ LE + +D++ NG + AEL ++ LG+ L E+ + +D
Sbjct: 87 LTTQTHLVDQA---QLLEVFRAFDRDGNGFISAAELARSMARLGQPLTFEELTRMMRDA- 142
Query: 422 DPEDDDGMIPYAAF 463
D DG+I + F
Sbjct: 143 -DTDGDGVISFKEF 155
>07_03_1286 +
25482632-25482685,25483948-25484145,25484242-25484464,
25484762-25484958,25485150-25485237,25487103-25487197,
25487585-25487705,25487795-25487831,25487924-25487951,
25488175-25488327,25488666-25488768,25488868-25488932
Length = 453
Score = 38.7 bits (86), Expect = 0.003
Identities = 32/156 (20%), Positives = 63/156 (40%)
Frame = +2
Query: 2 PGGNRQTPHKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXX 181
P G R PH ++ + +++ A F ++D + G IDA L +RAL T I
Sbjct: 297 PRGAR--PHGLTKQKRQEIKEA---FDLFDTDNSGTIDAKELNVAMRALGFEMTEEQINQ 351
Query: 182 XXXXXXXXXXXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTL 361
+ K ++ + E+ + + D+++NG + ++
Sbjct: 352 MIADVDKDGSGSIDYEEFE-HMMTAKIGERDSKEELTKAFSIIDQDKNGKISDVDIQRIA 410
Query: 362 LALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 469
LGE E+ E+ ++ + DG I + F++
Sbjct: 411 KELGENFTYQEIQEMVQEA--DRNGDGEIDFDEFIR 444
>05_03_0020 - 7433619-7434089
Length = 156
Score = 35.9 bits (79), Expect = 0.019
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +2
Query: 257 KDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDD 436
KD++ + + E ++YD + NG + EL L LG+K ++ + + + D
Sbjct: 79 KDQEAASEAELREAFRMYDADSNGKISARELHRVLRQLGDKCSVADCSRMIRSV--DADG 136
Query: 437 DGMIPYAAFLKKVM 478
DG + + F KK+M
Sbjct: 137 DGCVNFDEF-KKMM 149
Score = 30.7 bits (66), Expect = 0.73
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 293 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 463
+ + YD N +G + EL L ALG L EV + D MD D DG + + F
Sbjct: 6 QVFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRM-MDEMD-SDRDGFVDLSEF 60
>01_07_0179 -
41814886-41815074,41815172-41815222,41815365-41815469,
41815852-41815945,41816056-41816150,41816581-41816700,
41816737-41816832,41817272-41817569,41817777-41817853,
41818932-41819447
Length = 546
Score = 33.9 bits (74), Expect = 0.078
Identities = 28/135 (20%), Positives = 45/135 (33%)
Frame = +2
Query: 59 ERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLP 238
E F +D G G+I LG L +L T +
Sbjct: 39 EEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFA 98
Query: 239 IYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDC 418
+ ED +++D + NG + AEL L LGEK + + +
Sbjct: 99 ALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLGEKATVQQCRRMIEGV 158
Query: 419 MDPEDDDGMIPYAAF 463
++ DG+I + F
Sbjct: 159 --DQNGDGLISFEEF 171
>01_05_0628 - 23806901-23807650
Length = 249
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +2
Query: 284 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 463
+ E + +D++ NG + AEL ++ +G + +E+ ++ ++ D DG+I + F
Sbjct: 175 ELAEAFRAFDRDGNGFISAAELARSMARMGHPICYAELTDMMREA--DTDGDGLISFEEF 232
>05_05_0308 - 23985165-23985556,23985624-23985699
Length = 155
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 269 QGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCM---DPEDDD 439
Q ++ E L+D +E+G + EL L +LG+ +D++E D
Sbjct: 7 QEQVDECREIFDLFDSDEDGRIAAGELVTALRSLGQNVDEAEARRFLADATASGGGGGGG 66
Query: 440 GMIPYAAFL 466
G I +AAFL
Sbjct: 67 GDIDFAAFL 75
>04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251
Length = 1821
Score = 31.9 bits (69), Expect = 0.31
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 326 RFRSCHTASDIPGNLHTLPGL-CLSLLGCR 240
RF+SC+ D+P LH+LP L L + CR
Sbjct: 1745 RFKSCYDLVDLPAGLHSLPSLKRLEIWWCR 1774
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 31.9 bits (69), Expect = 0.31
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 311 DKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPY 454
D NG +L EL H L+ G ++DD E+A + +D++G+I +
Sbjct: 141 DVEHNGCILPEELWHALVKAGIEIDDEELARFVEHV--DKDNNGIITF 186
>05_04_0127 - 18262499-18263104
Length = 201
Score = 31.1 bits (67), Expect = 0.55
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +2
Query: 251 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 430
A K + A ++ + +D N +G + AEL ++G + D EVA + ++
Sbjct: 44 AAKPRPPAAEDETERVFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEA--DS 101
Query: 431 DDDGMIPYAAF 463
D DG I F
Sbjct: 102 DGDGYISLGEF 112
Score = 31.1 bits (67), Expect = 0.55
Identities = 31/135 (22%), Positives = 50/135 (37%)
Frame = +2
Query: 77 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAK 256
F +D G G+I L L R++ T + S
Sbjct: 60 FRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGYISLGEFAAISAPP 119
Query: 257 KDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDD 436
A ED ++D + NG++ AEL L +GE ++ + D +D +
Sbjct: 120 PGDAAAAEEDLRHAFGVFDADGNGVITPAELARVLRGIGEAATVAQCRRMI-DGVD-RNG 177
Query: 437 DGMIPYAAFLKKVMA 481
DG+I + F K +MA
Sbjct: 178 DGLINFEEF-KLMMA 191
>03_06_0014 -
31012116-31012229,31012773-31012985,31013058-31013171,
31013909-31014040,31014624-31014692,31014763-31015017,
31015347-31015520,31016104-31016280,31016999-31017107,
31017343-31017506,31018221-31018517
Length = 605
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 338 GAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 460
G + T+ + ++ E EV D D D+DG+ PY +
Sbjct: 142 GGHVKRTITSETRSTENEEDHEVLHDAFDDNDEDGLAPYGS 182
>12_01_0217 +
1647319-1648327,1648462-1648577,1648650-1648817,
1648911-1649038,1649121-1649220,1649329-1649433
Length = 541
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 293 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 466
E K DK+ +G + EL + L G K D+E+ ++ + D +G+I Y F+
Sbjct: 391 EMFKNIDKDNSGTITLEELKNGLAKQGTKFSDNEIEQLMEAA--DADGNGIIDYEEFV 446
>11_01_0216 +
1693889-1694897,1695034-1695149,1695222-1695389,
1695482-1695609,1695692-1695791,1696124-1696168
Length = 521
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 293 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 466
E K DK+ +G + EL + L G K D+E+ ++ + D +G+I Y F+
Sbjct: 391 EMFKNIDKDNSGTITLEELKNGLAKQGTKFSDNEIEQLMEAA--DADGNGIIDYEEFV 446
>05_06_0200 +
26329211-26329251,26329471-26329564,26329691-26329750,
26329871-26329979,26330065-26330117,26330244-26330324,
26330429-26330541,26330637-26330691
Length = 201
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 59 ERASFAFSIYDFEGKGKIDAFNLGDLLRAL 148
E+ +FAF +YD G G I+ L +++ AL
Sbjct: 98 EKTAFAFKLYDLRGTGYIEKEELREMVLAL 127
>05_02_0134 + 6954760-6955434
Length = 224
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 111 SMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKSS----FPSTAKQ 254
S+ S L + + + W P+ S RRR+ SC H+ +S FPS Q
Sbjct: 132 SLSSALKRARRQGDRNQRWMPAATSGRLRRRSPSCRHATTSSSLVFPSARPQ 183
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +3
Query: 45 ARTTLKGRLSPSQSTTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHS 224
+R T KG S S + RS + S S + +PS NS +RR+ SC S
Sbjct: 755 SRQTTKGSSSHSSRRSRSPSARSRTKKESSSHRESVSSD--EPSDNS--KRRKLHSCKSS 810
Query: 225 KSSFPSTAKQRK 260
S P ++ R+
Sbjct: 811 MSPSPPKSRNRQ 822
>03_06_0408 -
33722741-33722893,33723174-33723350,33723798-33723947,
33724085-33724145,33724338-33724558
Length = 253
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 236 PIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLL-ALGEKLDDSEVAE--- 403
P++ +A + F + LYD++++G + AE+ L+ L +E+A+
Sbjct: 162 PLFDKATRSIKPRCMMAFQQIFSLYDRDKDGAVSDAEMNAFLVRCFKVSLQPAEIADMKR 221
Query: 404 -VTKDCMDPEDDDGMIPYAAFL 466
V + + +D+G+I + FL
Sbjct: 222 VVQQHMIGCVNDNGLITFIGFL 243
>03_03_0278 - 16126803-16129049
Length = 748
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 428 EDDDGMIPYAAFLKKVMA*KTSQLVISLV 514
+D+DGM Y AF++KV++ + QL IS +
Sbjct: 535 DDEDGMPRYYAFIQKVLSLEPFQLKISFL 563
>02_02_0358 + 9373440-9373500,9375106-9375632
Length = 195
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 323 FRSCHTASDIPGNLHTLPGLC-LSLLGC 243
F CH +P LH L +C L ++GC
Sbjct: 122 FYECHRLQSLPEGLHLLSSICTLGIVGC 149
>02_02_0356 + 9336558-9337091
Length = 177
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 323 FRSCHTASDIPGNLHTLPGLC-LSLLGC 243
F CH +P LH L +C L ++GC
Sbjct: 104 FYECHRLQSLPEGLHLLSSICTLGIVGC 131
>02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915
Length = 1270
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 323 FRSCHTASDIPGNLHTLPGLC-LSLLGC 243
F CH +P LH L +C L ++GC
Sbjct: 1197 FYECHRLQSLPEGLHLLSSICTLGIVGC 1224
>01_07_0217 + 42072475-42072915
Length = 146
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 275 AYEDFLECLKLYDKNENGLMLGAELTHTL-LALGEKLDDSEVAEVTKDCMDPEDDDGMIP 451
A +F +D++ +G + AEL + ALGE + +E AE D DDDG++
Sbjct: 4 ATAEFRRVFSAFDRDADGKISAAELRLCMKAALGEDM-SAEEAEALVSSAD-TDDDGLLD 61
Query: 452 YAAFLK 469
F K
Sbjct: 62 EEEFTK 67
>11_06_0653 +
25911162-25911272,25911648-25911694,25912877-25913355,
25914089-25914249,25914324-25914519,25914745-25914807,
25914898-25915047,25915148-25915494
Length = 517
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +3
Query: 3 RXGTDKHHTK*ATSARTTLKGRLSPSQSTTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRN 182
R G+D+H T ++ LKG S S+ L+ R++PS + S Q+ + +
Sbjct: 300 RNGSDEHQTFSKSNGSCYLKGSCSEQPSSMLR---RNLPSKSKLQQSTSNQSVTPRELES 356
Query: 183 SVVQRRRARSCSHSKSSFPS 242
V S + SS PS
Sbjct: 357 FQVANEEVLSIRNEASSVPS 376
>07_01_0848 + 6888773-6888853,6888965-6889336
Length = 150
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +2
Query: 260 DKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMD----- 424
D+ + + + ++D+NE+G + +EL + LG K + +DCM
Sbjct: 75 DRKMASEGELKDAFYVFDRNEDGFICASELWSVMRRLGFK-----EGQRYEDCMRMIHTF 129
Query: 425 PEDDDGMIPYAAF 463
ED DG I Y F
Sbjct: 130 DEDRDGRISYLEF 142
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 284 DFLECLKLYDKNENGLMLGAELTHTLLALGEKL-DDSEVAEVTKDCMDPED 433
D C KL DK ++LG + L+ G +L D+ + ++K C+ ED
Sbjct: 138 DVSHCRKLSDKGLKAVLLGCQNLRQLVIAGCRLITDNLLIALSKSCIHLED 188
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 311 DKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPY 454
D NG +L EL L+ G ++DD E+A + +D++G+I +
Sbjct: 140 DVEHNGCILPEELWDALVKAGIEIDDEELARFVEHV--DKDNNGIITF 185
>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 263 KDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDD-- 436
KD+ ++ L+ + +D+N G + +L L LG+ L + +V ++ + + +
Sbjct: 1320 KDEVVDKELLQAFRYFDQNRAGYLKVDDLRCILHNLGKFLSNRDVKDLVQIALVESNSAR 1379
Query: 437 DGMIPYAAFLKKV 475
D I Y KKV
Sbjct: 1380 DNRIIYTKLAKKV 1392
>02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,
1884442-1884666,1884844-1885224,1885282-1885989,
1886546-1886839,1887211-1887709,1887949-1888721
Length = 1257
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 386 DSEVAEVTKDCMDPEDDDGMIPYAAF 463
D + AEVTKD D +D DGM A F
Sbjct: 931 DGDGAEVTKDGDDSDDSDGMDDDAMF 956
>09_04_0098 - 14580949-14581176,14581213-14581470
Length = 161
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 65 ASFAFSIYDFEGKGKIDAFNLGDLLRAL 148
A+ AF ++D G G IDA LG +L +L
Sbjct: 94 AAAAFRVFDRNGDGFIDAGELGSVLASL 121
>05_06_0212 +
26410330-26410419,26410562-26410846,26411005-26411208,
26411636-26411692,26411859-26412926
Length = 567
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 18 KHHTK*ATSARTTLKGRLSPSQSTTLKAKVRSMPSTLAIS*ERSTQTP 161
K HT+ A+ A T G+L + + A V S + +A+ E+S + P
Sbjct: 263 KPHTRKASYAMETESGKLKRNSRRSSAAPVESSQTNIAMETEKSRRNP 310
>04_04_0460 - 25378860-25379409,25379515-25379644,25380733-25380898
Length = 281
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 124 PWRSPESAQLKPHTGNHRETRW 189
PW S E A L H H E RW
Sbjct: 27 PWTSQEDALLVEHVRQHGEGRW 48
>01_03_0294 -
14745886-14745944,14745981-14746036,14746401-14746452,
14746922-14747303
Length = 182
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 284 LHTLPGLCLSLLGCRW 237
LHTLP + LGCRW
Sbjct: 5 LHTLPAVAAGGLGCRW 20
>01_01_0226 - 1930276-1930821
Length = 181
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 74 AFSIYDFEGKGKIDAFNLGDLL 139
AF +YD +G G+I A LG +L
Sbjct: 108 AFDVYDVDGDGRITAAELGKVL 129
>04_04_1197 + 31672019-31672325,31672431-31672740,31673334-31678335,
31678677-31678715
Length = 1885
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 326 RFRSCHTASDIPGNLHTLPGL 264
RF C+ D+P LH LP L
Sbjct: 1806 RFNCCYNLVDLPTGLHNLPSL 1826
>07_01_0302 - 2169271-2169531,2169778-2169828,2169929-2170381
Length = 254
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 229 VPSHLQPSKERQRPGSV*RF 288
+PS PSKER+ PG V R+
Sbjct: 98 IPSKWNPSKEREFPGQVLRY 117
>05_01_0538 +
4646772-4647059,4647462-4647542,4647819-4647890,
4648458-4649321
Length = 434
Score = 27.1 bits (57), Expect = 8.9
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = +3
Query: 51 TTLKGRLSPSQSTTLKAKVRSMPSTLA-IS*ERSTQTPHWQPSRNSVVQRRRARSCSHSK 227
T L G S + R PS A +S + PH +R S RR H K
Sbjct: 176 TKLSGITGESNRHGSEDTARRPPSVKASLSVSFGQRAPHRASTRESSPVRRTVTHDGHRK 235
Query: 228 SSFPS-TAKQRKTKTRER 278
SS PS + R+ R+R
Sbjct: 236 SSSPSRRSGSREVPDRDR 253
>03_01_0179 -
1443508-1443624,1443712-1443773,1444904-1444971,
1445811-1445868,1446439-1446629,1447164-1447359,
1448396-1448609
Length = 301
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +3
Query: 144 RSTQTPHWQPSRNSVVQRRRARSCSHSKSSFPSTAKQRKTKTRERMKI 287
R++ PH Q + S+ + R H K + P + +TK + + +
Sbjct: 31 RASPHPHQQAASTSLAETTEERVAHHKKEADPRRRRPHRTKVIDNLYV 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,984,872
Number of Sequences: 37544
Number of extensions: 248983
Number of successful extensions: 882
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -