Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31873
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 317 7e-88
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 189 2e-49
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 181 5e-47
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 97 1e-21
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 80 2e-16
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 56 4e-09
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 52 4e-08
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 47 2e-06
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 46 3e-06
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.033
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.044
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 32 0.059
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.077
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 29 0.31
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 28 0.72
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 1.7
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 1.7
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 26 2.9
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 5.1
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 25 5.1
SPBC530.14c |dsk1||SR protein-specific kinase Dsk1|Schizosacchar... 25 5.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 5.1
SPAC29A4.20 |||RNA polymerase II elongator complex, histone acet... 25 6.7
SPBC2G2.16 |||mannose-6-phosphate isomerase |Schizosaccharomyces... 25 6.7
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 25 6.7
SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit S... 25 6.7
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 25 6.7
SPAC15E1.02c |||DUF1761 family protein|Schizosaccharomyces pombe... 25 6.7
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 25 6.7
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 6.7
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 25 8.9
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 25 8.9
SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr 3|... 25 8.9
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 25 8.9
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 25 8.9
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 25 8.9
SPAC23H4.13c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 8.9
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 317 bits (778), Expect = 7e-88
Identities = 151/168 (89%), Positives = 158/168 (94%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 190
I+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 181
Query: 191 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 370
GRDLTDYLMKIL ERGY+F+TTAEREIVRDIKEKLCYVALDFEQE+ TAA SSSLEKSYE
Sbjct: 182 GRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQELQTAAQSSSLEKSYE 241
Query: 371 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDI 514
LPDGQVITIGNERFR PEALFQPS LG+E GIHE TYNSIMKCDVDI
Sbjct: 242 LPDGQVITIGNERFRAPEALFQPSALGLENAGIHEATYNSIMKCDVDI 289
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 189 bits (461), Expect = 2e-49
Identities = 86/167 (51%), Positives = 119/167 (71%)
Frame = +2
Query: 14 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 193
MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L H + RLD+AG
Sbjct: 123 MFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAG 182
Query: 194 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 373
RD T YL+ +L +GY+F TA+ E VR++KEKLCYV+ D E + + ++ L ++Y L
Sbjct: 183 RDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVSYDLELDHKLSEETTVLMRNYTL 242
Query: 374 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDI 514
PDG+VI +G+ER+ CPE LFQP +G E G+ E +++I DVDI
Sbjct: 243 PDGRVIKVGSERYECPECLFQPHLVGSEQPGLSEFIFDTIQAADVDI 289
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 181 bits (441), Expect = 5e-47
Identities = 81/166 (48%), Positives = 115/166 (69%)
Frame = +2
Query: 17 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 196
+ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI + ++ GR
Sbjct: 129 YETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGR 188
Query: 197 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 376
D+TDYL L + G+ ++AE+EIVR+IKEK CYVA DF E+ + +Y+LP
Sbjct: 189 DVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEIESWTEHKPQIHTYQLP 248
Query: 377 DGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDI 514
D Q IT+G E F PE LF P +G EA G+H + SI+ D+D+
Sbjct: 249 DNQTITLGTECFSAPEVLFNPEMMGSEASGLHIQLFKSILLSDIDL 294
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 97.5 bits (232), Expect = 1e-21
Identities = 66/183 (36%), Positives = 95/183 (51%), Gaps = 15/183 (8%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPH 166
IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY +
Sbjct: 145 IMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGS 204
Query: 167 AILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIVRDIKEKLCYVALDFEQEMA--T 334
+I + LAGRD+T ++ +L +R S TAER IKE+ CYV D +E +
Sbjct: 205 SIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCYVCPDIVKEFSRFD 259
Query: 335 AASSSSLEKSYELPDGQ--VITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCD 505
L+ + E G I +G ERF PE F P + + E N +
Sbjct: 260 REPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSP 319
Query: 506 VDI 514
+D+
Sbjct: 320 IDV 322
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 80.2 bits (189), Expect = 2e-16
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 20/152 (13%)
Frame = +2
Query: 98 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 277
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+ E IV
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVN 216
Query: 278 DIKEKLCYVALDFEQEMATAASS--SSLEKSYELPD------------------GQVITI 397
+IKE +CYV+ +F+++M S LE Y LPD QV+ +
Sbjct: 217 EIKESVCYVSQNFKEDMEICHEKPRSKLEICYALPDYSTGKHGYIVRDINQKIEQQVLNL 276
Query: 398 GNERFRCPEALFQPSFLGMEACGIHETTYNSI 493
NERF PE LF PS + + GI E S+
Sbjct: 277 SNERFMIPELLFSPSDIEIREAGIPEAVMQSV 308
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 55.6 bits (128), Expect = 4e-09
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 184
++FE +N P++ I + S Y + + ++GIVL+ G+ SH +P+ G + R+
Sbjct: 137 LLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRIS 196
Query: 185 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 361
G + YL+K+ + SF + C+V+ D+ ++A A LE+
Sbjct: 197 WGGSQSSSYLLKLFQIKYPSFPIKMLPSQAELLMHDHCHVSSDYTHDIAHALDRDILER 255
Score = 29.1 bits (62), Expect = 0.41
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 404 ERFRCPEALFQPSFLGMEACGIHE 475
E+ R PE +F PS +G++ GI E
Sbjct: 594 EQIRVPEVIFSPSIVGIDQAGILE 617
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 52.4 bits (120), Expect = 4e-08
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Frame = +2
Query: 242 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 421
S+ +R ++ + KE + V LD + A A+S + K +E PDG G ERFR
Sbjct: 243 SYEIFQKRRVIEEWKESVLDV-LDTPFDEAKASSRNP--KPFEFPDGVTHKFGQERFRIS 299
Query: 422 EALFQPSFLGMEAC---------GIHETTYNSIMKCDVDI 514
E LF PSF + G+HE Y SI+ CD ++
Sbjct: 300 EILFNPSFSASRSAETTPPQGSVGLHELVYQSILACDSEL 339
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 46.8 bits (106), Expect = 2e-06
Identities = 27/91 (29%), Positives = 44/91 (48%)
Frame = +2
Query: 17 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 196
FE P +A + ++ LYA G G+V+D G + PI +G + A +L L GR
Sbjct: 170 FEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGR 229
Query: 197 DLTDYLMKILTERGYSFTTTAEREIVRDIKE 289
+T +L +L E + ++ + DI E
Sbjct: 230 YMTQHLQNLLRESLPTLKSSGQYVSKEDITE 260
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 46.0 bits (104), Expect = 3e-06
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +2
Query: 14 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 193
MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L +G
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSG 180
Query: 194 RDLTDYLMKILTERGY 241
+ D L + L ++ +
Sbjct: 181 NAINDILAQTLRDKNF 196
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.033
Identities = 31/133 (23%), Positives = 47/133 (35%), Gaps = 4/133 (3%)
Frame = +3
Query: 36 PPCTSPSKPCSRCTRPVVPPVSCWTP----ATVSPTPCPSTKDTHSPTPSCVWT*PVXXX 203
PP PS P P +PP + P + P P P P+ PV
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVASI 491
Query: 204 XXXXXXXXXXXXXXXXXXXXGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTV 383
G + SR+ A+ + S++ P A PS +L + +
Sbjct: 492 AELPQQDGRANLMASIRASGGMDLLKSRKVSASPSVASTKTSNPPVEAPPSNNLMD--AL 549
Query: 384 RSSLSETKDSVAQ 422
S+L++ K VAQ
Sbjct: 550 ASALNQRKTKVAQ 562
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.044
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 39 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
P T+P P T PV P S P+ P P PS++ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 28.3 bits (60), Expect = 0.72
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +3
Query: 36 PPCTSPSKPCSRCTRPVVPPVSCWTP-----ATVSPTPCPSTKDTHSPTPS 173
PP +P P P VPP S P A + P P P+ K P PS
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +3
Query: 36 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Score = 25.8 bits (54), Expect = 3.8
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +3
Query: 36 PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
PP +PS +P VPPV P+ P P PS P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 31.9 bits (69), Expect = 0.059
Identities = 15/79 (18%), Positives = 39/79 (49%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 190
I+F + + +++ + + +G + V+D G + + EG +P++ ++++
Sbjct: 265 ILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRIKINYG 324
Query: 191 GRDLTDYLMKILTERGYSF 247
G D+T MK+L + +
Sbjct: 325 GDDITLLFMKLLMRSHFPY 343
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.5 bits (68), Expect = 0.077
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 12 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 173
SC+ ++ PP T S S P VPP S T + PT ST SP P+
Sbjct: 171 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 30.3 bits (65), Expect = 0.18
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 12 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 173
SC+ ++ PP T S S P VPP S T + PT ST +P P+
Sbjct: 114 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
Score = 27.9 bits (59), Expect = 0.95
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 12 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 173
SC+ ++ P T S S P VPP S T + PT ST SP P+
Sbjct: 228 SCTTSTSIP--TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 27.9 bits (59), Expect = 0.95
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
P S S ST PP S S + + + SC T ++ PT +T T + P+
Sbjct: 361 PTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 416
Score = 27.9 bits (59), Expect = 0.95
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 12 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTKDTHSPTP 170
SC+ ++ PP + + P + P VPP S TP T T C ST ++ TP
Sbjct: 392 SCTTSTSIPPTGNSTTPVT----PTVPPTSSSTPLTT--TNCTTSTSVPYTSTP 439
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
P S S ST PP S S + + SC T ++ PT +T T + P+
Sbjct: 307 PTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 362
Score = 25.8 bits (54), Expect = 3.8
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +3
Query: 6 PXSCSKHSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 170
P S S T P S S C+ T +PP T P ST T +P P
Sbjct: 319 PASTSSTGTSSSPLPSTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPP 372
Score = 25.0 bits (52), Expect = 6.7
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +3
Query: 6 PXSCSKHSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 170
P S S T P + S C+ T +PP T P ST T +P P
Sbjct: 265 PTSTSSTDTNSSPLPTTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPP 318
Score = 24.6 bits (51), Expect = 8.9
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 6 PXSCSKHSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 176
P S S T P S S C+ T +PP T V+PT P++ T T +C
Sbjct: 373 PASTSSTGTSSSPLLSTSTSCTTSTS--IPPTGNST-TPVTPTVPPTSSSTPLTTTNC 427
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 29.5 bits (63), Expect = 0.31
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 60 PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 164
PC+ + PPV+C TP P C K H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 28.3 bits (60), Expect = 0.72
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 270 SFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNP 440
+F +R S A SS + P +P+AP+R PTV++S S A+ ++ P
Sbjct: 335 AFTANRFSPAAPTTVSSERNAPPYPSAPTRPTP--PTVQTSSSAAPVDSAEPVAYQP 389
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 60 PCSRCTRPVVPPVSCWTPATVSPTPCPST 146
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 36 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 143
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +1
Query: 76 RVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPH 228
R RS HR+ G RR P+R HL R RH + R R H
Sbjct: 142 RTRSNHRH--GSHRRHEPYRTHLSRHH---RHSTTNYHSKRDDRYERRREH 187
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 25.4 bits (53), Expect = 5.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +3
Query: 330 PPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS 494
PP+ +PS SL P S + + S R ++ +S + K + P T S
Sbjct: 217 PPIEEYSPSVSLPTSPVAEESYNNVQRSSTVRNNTTQKSVLKKPSRKMSPAYTSS 271
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 25.4 bits (53), Expect = 5.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 394 SDDLTVGKFVRLLEGAAGCSGGHFLLEVKSDVAQLLL 284
+D VG+ L+ GAAG S GHF EV + + +LL
Sbjct: 350 ADSTFVGRAASLV-GAAGQSQGHF-TEVLNGIGTILL 384
>SPBC530.14c |dsk1||SR protein-specific kinase
Dsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 25.4 bits (53), Expect = 5.1
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 285 RRSCATSLLTSSRKWPPLHPAAPSRS-LTNFPTVRSSLSETKDSVAQRLSSNPRS 446
R++ A + +S+ + P++P S L+ FP++ ++SE +Q+ +S+P S
Sbjct: 276 RKTFAKNPTKNSKPAGQVIPSSPFTSTLSRFPSLEGAVSEISLRDSQKHNSHPNS 330
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.4 bits (53), Expect = 5.1
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +3
Query: 54 SKPCSRCTRPVVPPVSCWT---PATVSPTPCPSTKDTHSPTPSCVWT*PV 194
S+ S T P PP + T PA SP P + H PT S PV
Sbjct: 899 SRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPV 948
Score = 25.0 bits (52), Expect = 6.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 75 TRPVVPPVSCWTPATVSPTPCPSTKDT 155
T P S TPA V P P PST T
Sbjct: 833 TSPYATTSSHITPADVHPLPPPSTSTT 859
>SPAC29A4.20 |||RNA polymerase II elongator complex, histone
acetyltransferase subunit |Schizosaccharomyces pombe|chr
1|||Manual
Length = 544
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Frame = +1
Query: 142 LRRIRTPPRHPASGLS----RSRPHRLPH 216
+R++R P ASG++ +PHR PH
Sbjct: 70 MRKLRAKPVRTASGIAVVAVMCKPHRCPH 98
>SPBC2G2.16 |||mannose-6-phosphate isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 40 HVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPR 168
+VR HP A+ +R H Y +G C+ ++ R+ P+
Sbjct: 248 YVRLHPGEAVFLRALDPHAYVSGNIIECMAASDNVIRLGFTPK 290
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 6.7
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 42 CTSPSKPCSRCTRPVVPPV-SCWTPATVSPTPCPSTKDTHSPTPSCVWT 185
C +PS+ C + PV S T ++++PTP ++ T +PT + T
Sbjct: 825 CYNPSQ--YGCDNGALGPVQSSSTTSSITPTPTTTSSITPTPTTTSTTT 871
>SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit
Sfc6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 582
Score = 25.0 bits (52), Expect = 6.7
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 351 PSRSLTNFPTVRSSL--SETKDSVAQRLSSNPRSWVWKLAAST 473
P+ T F V L SET +SV R S + +WKL T
Sbjct: 216 PTNKETQFLAVGGMLKFSETTESVFMRTSGRNQIQLWKLENKT 258
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 25.0 bits (52), Expect = 6.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 270 SFVTSRRSCATSLLTSSR--KWPPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSN 437
S V+S A S L S+ + PPL P P S + + ++ S++ + A LSS+
Sbjct: 156 SIVSSSYGDAPSYLAPSKPNRSPPLKPEDPFASFNSSASAIAAASKSAAASASALSSD 213
>SPAC15E1.02c |||DUF1761 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 148
Score = 25.0 bits (52), Expect = 6.7
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = +3
Query: 360 SLTNFPTVRSS---LSETKDSVAQRLSSNPRSW-VWKLAASTRPHI 485
S T+ P VR S L D A L P +WK A ST PH+
Sbjct: 3 SYTHMPYVRPSAILLGIAFDHAASFLVYGPLMGDIWKRAMSTAPHV 48
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 57 KPCSRCTRPVVPPVSCWTPATVSPTPCP 140
KP S+ TRP +P + T +V P P P
Sbjct: 65 KPSSKATRPYIPSYTRLT-YSVPPLPIP 91
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.0 bits (52), Expect = 6.7
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 18 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 164
S+H + +PS + P+ P ++ W P T PT P + + + P
Sbjct: 244 SQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMT-QPTFQPPSANVYQP 291
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 24.6 bits (51), Expect = 8.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 312 TSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRS 446
TS + PP + + SL N P RSS E D V + P++
Sbjct: 47 TSIARRPPSTVGSQTGSLVNAPPKRSSGIERFDHVTGTAENRPQT 91
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 24.6 bits (51), Expect = 8.9
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 94 RYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNR 273
RYR L R P LR + +PP PA+ SR P RL++ H++ R
Sbjct: 84 RYRGSLLNRNSPS---LRSL-SPPATPATPRSRIEGESQTSAIPQTDRLILENHQQEFER 139
Query: 274 S 276
+
Sbjct: 140 A 140
>SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr
3|||Manual
Length = 834
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 418 PRGSLPTLVLGYGSLRHP 471
P G++PTL+LG G + HP
Sbjct: 568 PLGNVPTLILG-GDVYHP 584
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 24.6 bits (51), Expect = 8.9
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 110 SGDGVSHTVPIYEGYALP 163
+G G+ H + + +GYA+P
Sbjct: 157 AGRGIGHQIMVEQGYAMP 174
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 24.6 bits (51), Expect = 8.9
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Frame = -3
Query: 454 HTQERGLEESLWATESFVSDSDDLTV-------GKFVRLLEG 350
H +RG+ + + + VS S DLT+ GK +R+L+G
Sbjct: 386 HAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQG 427
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 24.6 bits (51), Expect = 8.9
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 312 TSSRKWPPLHPAAPSRSLTNFPTVRSSL-SETKDSVAQRLSSNPRSWVWKLAASTRPHIT 488
TSS ++ +PA S S +++P + + S S + SS P S ++A ST ++
Sbjct: 141 TSSSEFFTSYPATSSESSSSYPASSTEVASSYSASSTEVTSSYPAS--SEVATSTSSYVA 198
Query: 489 PS*SATWTS 515
P S+ +S
Sbjct: 199 PVSSSVASS 207
>SPAC23H4.13c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 24.6 bits (51), Expect = 8.9
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 281 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQV 388
IKEKL VA EQE + SSL+ S + G V
Sbjct: 111 IKEKLRRVANITEQEQQCIPAESSLDLSIQAMKGVV 146
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,322,391
Number of Sequences: 5004
Number of extensions: 49347
Number of successful extensions: 267
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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