Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31873
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 340 5e-94
SB_56| Best HMM Match : Actin (HMM E-Value=0) 339 7e-94
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 338 1e-93
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 338 1e-93
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 336 5e-93
SB_54| Best HMM Match : Actin (HMM E-Value=0) 241 2e-64
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 233 6e-62
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 205 2e-53
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 197 5e-51
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 137 6e-33
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 111 3e-25
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 107 5e-24
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 4e-13
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 66 2e-11
SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 36 0.026
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.035
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.060
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.080
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 33 0.18
SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12) 33 0.18
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.24
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 32 0.24
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.24
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 32 0.24
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18) 31 0.74
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 31 0.74
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 0.98
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 0.98
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 30 1.3
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 1.3
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 1.3
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 30 1.3
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 29 1.7
SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064) 29 1.7
SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1) 29 2.3
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 29 3.0
SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0) 29 3.0
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 3.0
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 3.0
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 29 3.0
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 3.0
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 3.0
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 3.0
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 29 3.0
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 3.0
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 4.0
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 4.0
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 4.0
SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 28 4.0
SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0) 28 4.0
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 28 4.0
SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_41475| Best HMM Match : HSA (HMM E-Value=7.5) 28 5.3
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 5.3
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 5.3
SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24) 28 5.3
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 5.3
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 28 5.3
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 5.3
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 28 5.3
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 28 5.3
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 28 5.3
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_46046| Best HMM Match : DUF164 (HMM E-Value=0.38) 27 6.9
SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 27 6.9
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 27 6.9
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 27 6.9
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 27 6.9
SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 27 6.9
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3) 27 6.9
SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5) 27 6.9
SB_59608| Best HMM Match : DiS_P_DiS (HMM E-Value=8.5) 27 9.2
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_53945| Best HMM Match : POPLD (HMM E-Value=1) 27 9.2
SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24) 27 9.2
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 27 9.2
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 27 9.2
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 27 9.2
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 27 9.2
SB_25401| Best HMM Match : DUF669 (HMM E-Value=3.2) 27 9.2
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 27 9.2
SB_16681| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23) 27 9.2
SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 27 9.2
SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 27 9.2
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 27 9.2
SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30) 27 9.2
SB_20840| Best HMM Match : Rota_NS26 (HMM E-Value=4.2) 27 9.2
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 27 9.2
SB_18521| Best HMM Match : ig (HMM E-Value=7.5e-11) 27 9.2
SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84) 27 9.2
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 340 bits (835), Expect = 5e-94
Identities = 161/168 (95%), Positives = 166/168 (98%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 190
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 191 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 370
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYE 242
Query: 371 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDI 514
LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDI
Sbjct: 243 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 290
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 339 bits (834), Expect = 7e-94
Identities = 161/168 (95%), Positives = 166/168 (98%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 190
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 191 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 370
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYE
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYE 241
Query: 371 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDI 514
LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDI
Sbjct: 242 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 289
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 338 bits (832), Expect = 1e-93
Identities = 160/168 (95%), Positives = 166/168 (98%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 190
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 85 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLA 144
Query: 191 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 370
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYE
Sbjct: 145 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYE 204
Query: 371 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDI 514
LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDI
Sbjct: 205 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 252
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 338 bits (832), Expect = 1e-93
Identities = 160/168 (95%), Positives = 166/168 (98%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 190
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLA 182
Query: 191 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 370
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYE 242
Query: 371 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDI 514
LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDI
Sbjct: 243 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 290
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 336 bits (827), Expect = 5e-93
Identities = 160/168 (95%), Positives = 166/168 (98%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 190
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 191 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 370
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMATAA+SSSLEKSYE
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYE 241
Query: 371 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDI 514
LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDI
Sbjct: 242 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 289
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 241 bits (590), Expect = 2e-64
Identities = 107/168 (63%), Positives = 134/168 (79%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 190
+MFE+FN P MYVA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLA
Sbjct: 2167 LMFESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLA 2226
Query: 191 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 370
GRDLT YL +++TERGYSF +TAE++I+RD+KE LCY A+D+E+E+ A +S E Y
Sbjct: 2227 GRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYM 2286
Query: 371 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDI 514
LPDGQ I IG+ERFR E LFQPS LG + GIHE+ + SI KCD+D+
Sbjct: 2287 LPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDL 2334
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 233 bits (570), Expect = 6e-62
Identities = 125/168 (74%), Positives = 131/168 (77%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 190
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DS G + H +
Sbjct: 123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS------------GDGVSHTV------ 164
Query: 191 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 370
I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSS+EKSYE
Sbjct: 165 ---------PIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYE 215
Query: 371 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDI 514
LPDGQVITIGNERFRCPEAL QPSFLGME+ GIHETTYNSIMKCDVDI
Sbjct: 216 LPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDI 263
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 205 bits (500), Expect = 2e-53
Identities = 96/106 (90%), Positives = 102/106 (96%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 190
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 191 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 328
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 197 bits (480), Expect = 5e-51
Identities = 87/167 (52%), Positives = 118/167 (70%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 190
+MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+A
Sbjct: 126 VMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIA 185
Query: 191 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 370
GRD+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQE A ++ L + Y
Sbjct: 186 GRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYT 245
Query: 371 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVD 511
LPDG+V+ + ERF PEALFQP + +E G+ E +N+I D+D
Sbjct: 246 LPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADID 292
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 137 bits (331), Expect = 6e-33
Identities = 66/129 (51%), Positives = 93/129 (72%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 190
+ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+A
Sbjct: 148 VFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIA 207
Query: 191 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 370
GRD++ YL +L + G+ F +++E EIVR IKE+ S S + Y
Sbjct: 208 GRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE----------------SMESERQQYA 251
Query: 371 LPDGQVITI 397
LPDG +I +
Sbjct: 252 LPDGSIIEV 260
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 111 bits (267), Expect = 3e-25
Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Frame = +2
Query: 56 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE- 232
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 233 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERF 412
RG++FT+++ +IV DIKEK+CY++ D +E+ ++ L K Y LPDGQ+I+IG E
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECI 886
Query: 413 RCPEALFQPSFL 448
E LF+P L
Sbjct: 887 SSMEPLFRPDLL 898
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 107 bits (257), Expect = 5e-24
Identities = 48/59 (81%), Positives = 53/59 (89%)
Frame = +2
Query: 338 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDI 514
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDI
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDI 63
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 71.3 bits (167), Expect = 4e-13
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +2
Query: 23 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 199
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 200 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 331
+T ++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 389 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDI 514
+ + ERF PE F P F + + E N I C +D+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDV 238
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 65.7 bits (153), Expect = 2e-11
Identities = 29/74 (39%), Positives = 48/74 (64%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 190
+MFE +N PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LA
Sbjct: 55 LMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLA 114
Query: 191 GRDLTDYLMKILTE 232
G +T ++ E
Sbjct: 115 GDFITAQCRQMFEE 128
>SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 36.3 bits (80), Expect = 0.015
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +3
Query: 297 ATSLLTSSRKWPPL--HPAAPSRSLTNFP---TVRSSLSETKDSVAQRLSSNPRSWVWKL 461
+TS +T S K+PP+ +PA PS L P TV SLS T S+P S V L
Sbjct: 452 STSSITGSSKYPPVSPNPAKPSNILFEGPSSSTVFKSLSPTDQMSNSPSQSSPGSSVSDL 511
Query: 462 AASTRPHI 485
+ S+ P++
Sbjct: 512 SCSSDPNV 519
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 35.5 bits (78), Expect = 0.026
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
Frame = +2
Query: 11 IMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 172
I+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 324 ILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAV 383
Query: 173 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---AS 343
R + +L E +F ++ +KE CYV+ F ++M A
Sbjct: 384 RR-----------QLHVLDE---TF-------VINQVKEDTCYVSSQFYKDMEIARQRGK 422
Query: 344 SSSLEKSYELPD 379
+++ + Y LPD
Sbjct: 423 ENTIVREYVLPD 434
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.035
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 36 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 30.7 bits (66), Expect = 0.74
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTKDTHSPTPSC 176
P CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1518 PVGCSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 36 PPCTSPSKPCSRCTRPVVPPVSC 104
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 27 STRPPCTSPSKPCSRC--TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 170
+TRP T P+ P ++ TRP PP P + P P P+T+ P P
Sbjct: 931 TTRP--TVPTTPTTQASTTRPTPPP-----PTSALPPPIPATQVPPPPLP 973
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 34.7 bits (76), Expect = 0.046
Identities = 29/77 (37%), Positives = 34/77 (44%)
Frame = +1
Query: 46 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 225
RR S A R RS R R+ RRR RR R+P H S SRSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 226 HRARLLVHYHRRAGNRS 276
R+R H R+ + S
Sbjct: 270 SRSRSPTHRRHRSRSHS 286
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 34.3 bits (75), Expect = 0.060
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 173
P + HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 57 PSTPCTHSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 31.9 bits (69), Expect = 0.32
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCT-----RPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 170
P + S ST ++PS PC+ T P P C TP+T S PST T S TP
Sbjct: 42 PSTPSTPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPC-TPSTPSTPSTPSTPSTPS-TP 99
Query: 171 S 173
S
Sbjct: 100 S 100
Score = 31.5 bits (68), Expect = 0.43
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTKDTHSPTPS 173
P + S ST +PS P + CT P + TP+T S TPC PST T S TPS
Sbjct: 39 PCTPSTPSTPSTPITPSTPSTPCTHST--PSAPSTPSTPS-TPCTPSTPSTPS-TPS 91
Score = 31.1 bits (67), Expect = 0.56
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCT--RPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 173
P + S ST +PS PC+ T P P P + TP+T S T PST T S TPS
Sbjct: 407 PSTPSTPSTPITPRTPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPS-TPS 465
Score = 30.3 bits (65), Expect = 0.98
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +3
Query: 21 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 173
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 173
P + S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 18 PSTPSTPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
P + S STR ++PS P + T P P TP+T S T PST T S TPS
Sbjct: 640 PSTPSTPSTRSTPSTPSTPSTPST-PSTPS----TPSTPSLTHTPSTPSTPS-TPS 689
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
P + S ST ++PS P + CT P P TP+T S PST T S TPS
Sbjct: 252 PSTPSMPSTPSTPSTPSTPSTPCT-PNTPS----TPSTPSMPSTPSTPSTPS-TPS 301
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
P + S ST ++PS P + CT P P TP+T S PST T S TPS
Sbjct: 802 PSTPSMPSTPSTPSTPSTPSTPCT-PNTPS----TPSTPSMPSTPSTPSTPS-TPS 851
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 45 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 170
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCT--RPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 173
P + S ST ++PS P + T P P P + TP+T+S PST T S TPS
Sbjct: 144 PSTPSTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRS-TPS 202
Score = 27.1 bits (57), Expect = 9.2
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTPS 173
P + S ST ++PS P + T P +P P + TP+T S TPC P+T T S TPS
Sbjct: 231 PSTPSTLSTPITPSTPSTPSTPST-PSMPSTPSTPSTPSTPS-TPCTPNTPSTPS-TPS 286
Score = 27.1 bits (57), Expect = 9.2
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 24 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 173
H+ P T PS P + T P P P + TP+T S PST T S TPS
Sbjct: 453 HTPSTPST-PSTPSTPST-PSTPSTPSTPSTPSTPSTPSTPSTSSTPS-TPS 501
Score = 27.1 bits (57), Expect = 9.2
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTPS 173
P + S ST ++PS P + T P +P P + TP+T S TPC P+T T S TPS
Sbjct: 781 PSTPSTLSTPITPSTPSTPSTPST-PSMPSTPSTPSTPSTPS-TPCTPNTPSTPS-TPS 836
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.060
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 36 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 173
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.060
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 24 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 137
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 39 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 137
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 33.9 bits (74), Expect = 0.080
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 6 PXSCSKHSTRP-PCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
P S + T P P T SP+ P P P + TP T +PT TK T + TP+
Sbjct: 44 PTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 30 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +3
Query: 6 PXSCSKHSTRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TKDTHSPT 167
P + T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 84 PTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP-TPS 173
P + T+P T+P+ T P S P +PTP T T +P TP+
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDTHSPTPS 173
P + ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 39 PSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +3
Query: 27 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 167
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 167
P + ++ + P +P+ P + P ++ TPAT TP T H+PT
Sbjct: 61 PTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTP-TPTKPTPTAHTPT 113
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 131
P + + + P +P+KP + P P + TP T +PT
Sbjct: 107 PTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +3
Query: 39 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 164
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +3
Query: 15 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 137
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 39 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 137
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 39 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 164
PCT PC T P +TP T TPC T P
Sbjct: 667 PCTERYSPC---TERYTPCTERYTPCTERYTPCNDLSVTPYP 705
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 170
P + H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 131 PCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 170
P + H+ +P T P R T+P P + T PT P T H+ P
Sbjct: 101 PKTTKPHTNKPYTTKPRTTKPRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTKP 156
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTPSCV 179
P + H+T+P T P T+P P T P T P T H+ P +
Sbjct: 36 PRTTKPHTTKPHTTKPHTIKPHTTKPHTTKPHTTKPHTTKPRTTKPQTTKPHTTKPHTI 94
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS-PTPCPSTKDTHSPTP 170
P + H+T+P T P R T+P P T+ T P T H+ P
Sbjct: 56 PHTTKPHTTKPHTTKPHTTKPRTTKPQTTKPHTTKPHTIKLYTTKPKTTKPHTNKP 111
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS-PTPCPSTKDTHSPTP 170
P + H+T+P T P T+P P T PT P T H+ P
Sbjct: 121 PRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTTKPHTTKPHTTKP 176
>SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)
Length = 349
Score = 32.7 bits (71), Expect = 0.18
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +2
Query: 200 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 379
+T+ L+++ +R + F + RD L V L + T ASS S +S LPD
Sbjct: 216 VTEELVQLAAKRTFVFKVEMDETEYRDALLDLLVVKLQANGLLKTIASSRSRRRSKSLPD 275
Query: 380 GQVITIGNERFRCP 421
+ + + R CP
Sbjct: 276 LASLVLNSSR-ECP 288
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 3 DPXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 161
+P +PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 373 EPCKRPPTKAKPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 32.3 bits (70), Expect = 0.24
Identities = 46/161 (28%), Positives = 60/161 (37%), Gaps = 2/161 (1%)
Frame = +1
Query: 34 ARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLP 213
ARH RH V + HR R GL R + H RIR GL+R HR+
Sbjct: 1263 ARHRIRH-GLXXXXHVLARHRIRHGLARHRIRHGLARHRIR-------HGLAR---HRIR 1311
Query: 214 HE-DPHRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAG-NGHRCIQQLPREVLRTSRRSG 387
H HR R + H + H+ L R +R G HR L R +R
Sbjct: 1312 HGLALHRIRCGLARHTIRRGLARHRTRHGLARHTIRHGLTRHRTRHGLARHTIR--HGLA 1369
Query: 388 HHYRKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 510
H + + R L + +G RH H H +R G
Sbjct: 1370 RHTIRHGLAEHRHGLAWHRIRHGLPRHRTRHGLARHRIRSG 1410
Score = 27.9 bits (59), Expect = 5.3
Identities = 44/145 (30%), Positives = 57/145 (39%), Gaps = 5/145 (3%)
Frame = +1
Query: 91 HRYRAGLRRRCLPHRAHLRRIRTP-PRHPAS-GLSRSRPHRLPHE-DPHRARLLVHYHRR 261
HR R GL R + H RIR RH GL+R HR+ H HR R + HR
Sbjct: 1184 HRIRHGLARHTIRHGLARHRIRHGLARHRIRLGLAR---HRIRHGLARHRIRHGLARHRT 1240
Query: 262 AGNRS*HQGEAVLRRS*LRAGNG-HRCIQQLPREVLRTSR-RSGHHYRKRKIPLPRGSLP 435
+ H+ L R +R G HR L +R R H + +I R L
Sbjct: 1241 RHGLARHRIRHGLARHRIRHGLARHRIRHGLXXXXHVLARHRIRHGLARHRI---RHGLA 1297
Query: 436 TLVLGYGSLRHPRDHI*LHHEVRRG 510
+ +G RH H H +R G
Sbjct: 1298 RHRIRHGLARHRIRHGLALHRIRCG 1322
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.24
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 92 TGIVLDSGDGVSHTVPI 142
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.3 bits (70), Expect = 0.24
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 45 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
T+P+ P + T P P + TP T + TP +P P+
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 39 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 134
P T+P+ + T P P + TP T + TP
Sbjct: 121 PTTAPTTAATTPTTPTTAPTTPTTPTTAATTP 152
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 419 PEALFQPSFLGMEACGIHET 478
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 30.7 bits (66), Expect = 0.74
Identities = 40/127 (31%), Positives = 54/127 (42%)
Frame = +1
Query: 46 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 225
RR+ SR+ + R RS +R R+ R R R+ R+ S SRSR + P P
Sbjct: 147 RRYRSRSDS-RPRSRYRGRSRSRSRDRYRERRPRKSRSKSLD-RSRRSRSRSYSRPSPSP 204
Query: 226 HRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAGNGHRCIQQLPREVLRTSRRSGHHYRKR 405
+R+R RR+ +RS RS R R + R R SRRS R R
Sbjct: 205 YRSRRSRSRTRRSRSRSRRS------RSRSRDRRPRRRSRDRERSRERRSRRSRDKSRSR 258
Query: 406 KIPLPRG 426
+ RG
Sbjct: 259 EKSRERG 265
>SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18)
Length = 1023
Score = 30.7 bits (66), Expect = 0.74
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
P C+ + PP KPC + + +V PV+ P TPCP+ + PTPS
Sbjct: 807 PQDCAAGTYSPPGFGTCKPC-QSGKKLVNPVN---PGATYCTPCPA--GSSCPTPS 856
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 30.7 bits (66), Expect = 0.74
Identities = 31/125 (24%), Positives = 46/125 (36%)
Frame = +3
Query: 30 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXXXXX 209
T P +P+ S P P + +T T S TP PS T S TP+ +T P
Sbjct: 15 TSTPSYTPTT--SYTPTPSYTPTTSYT-CTTSYTPTPSYTPTPSYTPTTSYT-PTTSYTP 70
Query: 210 XXXXXXXXXXXXXXXXXXGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRS 389
S+ ++ T+ TS+ + P P+ S T P+ S
Sbjct: 71 TTSYTPTPSYTPTTSYTPTPSYTSTTSYTPTTSYTSTTSYTPTPSYTPTPSYTPTPSYTS 130
Query: 390 SLSET 404
+ S T
Sbjct: 131 TTSYT 135
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 12 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTKDTHSPTPS 173
+C+ T P +P+ + T P + +TP T +PTP + +++PTPS
Sbjct: 39 TCTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPS 91
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 0.74
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 45 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 149
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 30.7 bits (66), Expect = 0.74
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -1
Query: 192 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 55
P+ + +W P T W +PSP+ T P ++T+W
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 192 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 55
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 192 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 55
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -1
Query: 168 AWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 55
+W S P T W +PSP+ T P ++T+W
Sbjct: 77 SWTSPSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSW 114
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -1
Query: 198 SRPAKSRRRMAWGSAYPS*MGTVWETPSPESST 100
S P + +W S P T W +PSP+ T
Sbjct: 103 SLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKT 135
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 0.98
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 24 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 27 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 24 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
++T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPT 118
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +3
Query: 27 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPT-PCPSTKD-THSPTPSCVWT*P 191
+T P T+P+KP + T P + PAT +PT P +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 27 STRPPC-TSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
+T PP T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 52 TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 27 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 27 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
+T P T+P+KP + T P + P T +PT +T + TP+
Sbjct: 95 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPT 146
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 0.98
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 51 PSKPCSRCTRPVVPP 95
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 29.9 bits (64), Expect = 1.3
Identities = 30/103 (29%), Positives = 37/103 (35%)
Frame = +1
Query: 28 QHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHR 207
Q RRHP R R+ + G+R R P +RR RT R + R R H
Sbjct: 356 QRGERERRHPPGVAICRYRTRQVSQRGVRERRNPPGVAIRRYRT--RQVSQRGERERRHH 413
Query: 208 LPHEDPHRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAGNGHR 336
P R R R R H G A+ R + G R
Sbjct: 414 -PGVAICRYRTRQVSQRGKRERRHHPGVAICRYRTRQTGESTR 455
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 36 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 170
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 39 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 137
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 39 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 143
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTKDTHSPTP 170
P KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 200 PRPTYKHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 36 PPCTSP--SKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTKDTHSPTP 170
PP +P S P + +PP TP T + PTP P T +PTP
Sbjct: 244 PPTPTPHTSIPPTPTPHTSIPPTP--TPHTSIPPTPTPHTSIPPTPTP 289
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 24 HSTRPPCTSPSKPCSRCT-RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 179
+S P SPS P RP PP+ P + TP P + T P P+ V
Sbjct: 582 YSPSSPSYSPSSPSFHHNLRPTPPPLPLSIPLLLQATP-PHLQSTAQPRPTTV 633
>SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064)
Length = 265
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Frame = +1
Query: 145 RRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNRS--*HQGEAVLRRS*LR 318
+R R +H + +S S P R + + R H HR + + S H+ + R R
Sbjct: 159 QRERRLHKHSSPSISPSPPRRQKYSNGQSDRKGKHRHRDSSSPSPPRHRSRSPFRNGNKR 218
Query: 319 AGNGHRCIQQLPREVLRTSRRSGHHYRKRKIPLPR 423
G +Q R V KR++P PR
Sbjct: 219 KGFPTHRNKQRSRSVSPVQSGQASQVMKRRVPSPR 253
>SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 329
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 349 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 435
LPR ++R HY++ +PLPRG P
Sbjct: 132 LPRGGSPLTKRRESHYQEEGVPLPRGGSP 160
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 349 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 435
LPR ++R HY++ +PLPRG P
Sbjct: 154 LPRGGSPLTKRRESHYQEEGVPLPRGGGP 182
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 72 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +3
Query: 15 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT--PCPSTKDTHSPTPSC 176
CS+ +T PP T+ S T+ + TP T T PC T +P +C
Sbjct: 620 CSRPTT-PPVTTTKSTTSSTTKGTTASTTTSTPTTTPTTRPPCNLHCQTLNPDGTC 674
>SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 170
P S S S P SP P S P P S ++P+ SP+ S+ SP P
Sbjct: 4 PDSPSPSSPSPDSPSPDSPSSYSPSPDSP--SSYSPSLDSPSSYSSSSYLPSPDP 56
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 291 SCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSV 416
SCA S+ + L PA+P+ S++ F T++ T+ S+
Sbjct: 970 SCAEPRSIDSKHYTALSPASPASSISCFSTLQLKQMPTRSSI 1011
>SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0)
Length = 603
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 355 REVLRTSRRSGHHYRKRKIPLPR--GSLPTLVLGYGSLRHPR 474
R++LR R HHYR+ + R G++P + Y + R PR
Sbjct: 521 RDLLRALRNKKHHYRELPDEVKRSLGTIPDEYVRYFTSRFPR 562
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 33 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 170
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 387 SSLSETKDSVAQRLSSNPRSWVWK 458
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +3
Query: 45 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 182
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 167
P + + +T P T+P R T P T A +P P +H+P+
Sbjct: 191 PVTTTPRTTTPETTTPETTTPRTTTPETTTPKKTTAAKKAPLPVTHATTSHAPS 244
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 75 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 179
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 284 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 424
+EK+ L+ E E A ++ LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 51 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PV 194
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 21 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 25 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRC---LPHRAHLRRIRT-PPRHPASGLSR 192
I H++ RH S+ L R R HR + RR + H ++L R R P ++ +
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRPRNWVPPFNSTAMIF 1647
Query: 193 SRPH 204
+PH
Sbjct: 1648 GKPH 1651
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 48 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 170
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 72 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 191
CT P ++ P T + T P TK P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 127 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 228
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 15 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 167
C +H T K C C + PP+ T T +PT P TK T +PT
Sbjct: 167 CRRHKTYMNIYC-RKSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)
Length = 237
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPA-TVSPTPCPSTKDTHSPTP 170
P + H+T +P P S P + +TPA TV P +++ T SP P
Sbjct: 63 PAQQAPHTTAASQPAPYTPASGQPASYTPAYTPYTPASTVGRMPPTTSQSTPSPAP 118
>SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0)
Length = 893
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 385 LTVGKFVRLLEGAAGCSGGHF 323
+TVGK + L+ G AG GHF
Sbjct: 366 MTVGKLIELIAGKAGVLEGHF 386
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 28.3 bits (60), Expect = 4.0
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Frame = -3
Query: 322 LLEVKSDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVATG*VQTQDGVGECVS-- 149
++ V V ++L V + G G + + + +D V + A G V GVG+
Sbjct: 16 VVSVMMVVLVMMLMVRDSDDGGVGDDAIGRVSDD--GGVGDDADGRVSDDGGVGDDADGR 73
Query: 148 FVDGHGVGDTVAGVQHDTGG----TTGRVQREHGLDGDVHG 38
D GVGD G D GG GRV + G+ D G
Sbjct: 74 VSDDGGVGDDADGRVSDDGGVGDNAEGRVSDDGGVGDDAIG 114
Score = 27.5 bits (58), Expect = 6.9
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = -3
Query: 280 VTNDFPLGGGSE-RVAALGEDLHEVVCEVATG*VQTQDGVGECVSFVDGHGVGDTVAGVQ 104
V++D +G +E RV+ G + + V+ DGVG VS D GVGD G
Sbjct: 88 VSDDGGVGDNAEGRVSDDGGVGDDAIGRVSDDGGVGDDGVGR-VS--DNGGVGDDANGRV 144
Query: 103 HDTGG----TTGRVQREHGLDGDVHGGRV 29
D GG GRV + G+ GD GRV
Sbjct: 145 SDDGGVGDDAEGRVSDDGGV-GDDGVGRV 172
>SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S +PH+
Sbjct: 113 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNQPHV 160
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S PH+
Sbjct: 3 HPHVYSRVRSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHV 50
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S PH+
Sbjct: 25 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHV 72
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S PH+
Sbjct: 47 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHV 94
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S PH+
Sbjct: 69 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHV 116
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S PH+
Sbjct: 91 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHV 138
>SB_41475| Best HMM Match : HSA (HMM E-Value=7.5)
Length = 195
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/76 (25%), Positives = 25/76 (32%)
Frame = +1
Query: 13 HVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSR 192
H + R H R RVR H YR HR H R+ + +
Sbjct: 119 HEYRVHRVHEYRVH--RVHEYRVRRVHEYRVHRVHEYRVHRVHEYRVHRVHEYRVHRVHE 176
Query: 193 SRPHRLPHEDPHRARL 240
R HR+ HR +
Sbjct: 177 YRVHRVHEYRVHRVHV 192
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 18 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 149
S+ ST+ P T KP + RP+ P + P + P P T+
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTE 295
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 21 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 176
KH T PP S + P P+S TP+ SP S+ +HS +C
Sbjct: 2062 KHHT-PPSAHSYGTSSYDSSPQKLPISYLTPSPESPKDWSSSPSSHSDWSNC 2112
>SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24)
Length = 676
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S +PH+
Sbjct: 615 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNQPHV 662
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S PH+
Sbjct: 351 HPHVYSRVKSNHPHVYSRVRRNHSHVYSRVKSN-HPHVYSRVKSNHPHV 398
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S PH+
Sbjct: 505 HPHVYSRVRSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHV 552
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S PH+
Sbjct: 527 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHV 574
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S PH+
Sbjct: 549 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHV 596
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S PH+
Sbjct: 571 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHV 618
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S PH+
Sbjct: 593 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHV 640
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ N S V+ S PH+
Sbjct: 340 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVRRN-HSHVYSRVKSNHPHV 387
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 339 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 485
HP SR +N P V S + V R+ SN V+ S PH+
Sbjct: 494 HPHVYSRVKSNHPHVYSRVRSNHPHVYSRVKSN-HPHVYSRVKSNHPHV 541
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 36 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 134
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 36 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPCPSTKDTHSPT 167
PP T+P P P + T AT PT P+T T PT
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPT 45
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 57 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 176
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +3
Query: 6 PXSCSKHSTRPPCT--SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
P S+ + PP + +P P SR + P PP T P P PS P PS
Sbjct: 288 PPPPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARM---GTAPPPPPPSRSSQRPPPPS 342
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 27.9 bits (59), Expect = 5.3
Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +1
Query: 7 QXHVRNIQ-HARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASG 183
Q H RN+Q R RR R L R+R R R R HR LRR+R R
Sbjct: 1203 QRHKRNLQKRLRRARRR--RRLRKRIRRRRRQRRSRRY----HRRQLRRLRRAIRRK--- 1253
Query: 184 LSRSRPHRLPHEDPHRARLLVHYHRRAGNR 273
+ R R P R R + RR G +
Sbjct: 1254 IQRKRKGGRPTAIKFRYRGRICGVRRKGRK 1283
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
P S + P P KP + P PP P+T P P P D P+
Sbjct: 1044 PRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPA 1099
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 39 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 185
P +P+ P S+ T PP+ TP + TP P+ + + P T
Sbjct: 19 PAPTPTTPTSQATTASGPPII--TPIPLKETPTPALESAPAAMPDATDT 65
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 51 PSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 170
P+K RP V P+S + A ++PT T + P P
Sbjct: 317 PAKSSIDVARPPVVPISSHSAAPIAPTTTTKTTKSGLPEP 356
>SB_46046| Best HMM Match : DUF164 (HMM E-Value=0.38)
Length = 221
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 21 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPT 167
K TRP TS + S+ RP P++ +P S + P+ D HSPT
Sbjct: 169 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPT 219
>SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 24 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 173
+ T PP +SPS S + P P S +P++ SP+ PS+ + P+ S
Sbjct: 137 YPTYPPSSSPSS--SFPSVPPSSPPSSSSPSSSSPSVPPSSPPSSPPSSS 184
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 387 SSLSETKDSVAQRLSSNPRSWVWK 458
S+ SETK SV +R + + W+W+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWR 480
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 167
P + + +T P T+P R T P T A +P P +H+P+
Sbjct: 1792 PETTTPETTTPRTTTPETTKPRTTTPKTTTPKKTTAAKKAPLPVTHATTSHAPS 1845
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 387 SSLSETKDSVAQRLSSNPRSWVWK 458
S+ SETK SV +R + + W+W+
Sbjct: 93 STKSETKASVVERFNRTFKGWMWR 116
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 27.5 bits (58), Expect = 6.9
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 16 VRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRC-LPHRAHLRRIRTPPRHPASGLSR 192
+RN+ ++ R H +RV+S + R+ R R P R R R+P R P SR
Sbjct: 431 IRNLDDSKF-RSHEGETSYIRVKSDLQSRSHSRSRSPSPRRRSRSRSRSPRRRP-KSYSR 488
Query: 193 SRPHRLPHEDPHRAR 237
S P P R+R
Sbjct: 489 S-----PSGSPRRSR 498
>SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 387 SSLSETKDSVAQRLSSNPRSWVWK 458
S+ SE K SV +R + ++W+W+
Sbjct: 193 STRSELKSSVVERFNRTLKTWIWR 216
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 387 SSLSETKDSVAQRLSSNPRSWVWK 458
S+ SETK SV +R + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462
>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
Length = 1197
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +3
Query: 39 PCTSPSKPCSRCTRPVVPPVSCWTPATVSP----TPCPSTKDTHSPTP 170
P T +P S P +PP P ++ P P P DT P P
Sbjct: 843 PTTKTDRPLSPSAPPPLPPRPVGAPPSLPPRPRTRPLPPKSDTPPPPP 890
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = +1
Query: 46 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPH 216
R P L V R+ + GL +R PH T P HP R+ P PH
Sbjct: 342 RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGLSKSTAPDHPHGVSKRTAPDH-PH 397
>SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3)
Length = 713
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 57 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 170
+PC T P PP + W+P + P P D PTP
Sbjct: 235 EPCFTKTEPPAPPSNYWSP-PMQPMQQP---DQEQPTP 268
>SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5)
Length = 276
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 57 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 170
+PC T P PP + W+P + P P D PTP
Sbjct: 169 EPCFTKTEPPAPPSNYWSP-PMQPMQQP---DQEQPTP 202
>SB_59608| Best HMM Match : DiS_P_DiS (HMM E-Value=8.5)
Length = 370
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/80 (21%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 200 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS-SSSLEKSYELP 376
++D L+K + Y+ T ER++ ++C+ ++E ++ +S S+S ++
Sbjct: 128 ISDSLLKEEIDLSYALTLFDERDLKAHGNSEVCFQEAGSDRENSSPSSHSNSASENNNSA 187
Query: 377 DGQVITIGNERFRCPEALFQ 436
Q+ + + +C ++LFQ
Sbjct: 188 SSQINALDHNIRKC-DSLFQ 206
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +3
Query: 36 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 134
PP +P+ P P PP PA P P
Sbjct: 57 PPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPP 89
>SB_53945| Best HMM Match : POPLD (HMM E-Value=1)
Length = 465
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 33 RPPCTSPSK--PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 185
RPP T+P+ P S T PP+ TP + TP P+ + + P T
Sbjct: 30 RPPETTPAPTTPTSPATPASGPPIR--TPIPLKETPTPALESAPAAMPDATDT 80
>SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1575
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 160 ECVSFVDGHGVGDTVAGVQHDTGGTTGRVQRE 65
+CVSF D +T GVQ GG G V+R+
Sbjct: 69 DCVSFEDPFTGVETPLGVQQGGGGGGGGVKRK 100
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 126 ETPSPESSTIPVVRPDAYSESTAW 55
ETP+PE + P PDA TAW
Sbjct: 154 ETPTPELESAPAAMPDA--TDTAW 175
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +3
Query: 39 PCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSP 164
P +P P S P +PP + TP+ P P PS P
Sbjct: 906 PYNTPMPPISSTPYQAPPTLPPTTLTTPSWSQPVPVPSMYQPQPP 950
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -3
Query: 481 CGLVDAASFHTQERGL-EESLWATESFVSDSDDLTVGKFVRLLEGAAGCSGGHFLLEVKS 305
C LV A + R L +SLW + SFV + + + LLE C G+ +K
Sbjct: 1998 CNLVAAYVCLLRARDLARKSLWGSSSFVKEKTESLLVLVKHLLEVCVLCRCGN----LKE 2053
Query: 304 DVAQLLLDVTND 269
D+++L+ D
Sbjct: 2054 DLSKLMKSEEGD 2065
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Frame = +3
Query: 45 TSPSKPCSRCTRPVVPPVSCWTPATVS---------PTPCPSTKDTHSPTPSC-VWT 185
T S+PC +CT V P + T A S PTP S ++ H +P WT
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWT 94
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 27.1 bits (57), Expect = 9.2
Identities = 29/99 (29%), Positives = 36/99 (36%), Gaps = 1/99 (1%)
Frame = +1
Query: 115 RRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNRS*HQGEA 294
R L R+ R +R A+ RSR H L HED H R +R E
Sbjct: 200 RTPLKRRSRSRSLRHEDHDDATP-RRSRSHSLRHEDEEERSPSGGRHEREDSREPSSAEE 258
Query: 295 VLRRS*LRA-GNGHRCIQQLPREVLRTSRRSGHHYRKRK 408
R S + R + R +SRR H RK K
Sbjct: 259 SSRTSSPHSRKKKSRKHRHRSRSSSLSSRRRSKHKRKSK 297
>SB_25401| Best HMM Match : DUF669 (HMM E-Value=3.2)
Length = 226
Score = 27.1 bits (57), Expect = 9.2
Identities = 26/76 (34%), Positives = 36/76 (47%)
Frame = +3
Query: 264 GKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPR 443
GK+ ++R+S ++ TSS PP P +L+ P S+SE DS L S P
Sbjct: 29 GKA-TSTRKSDHSTYKTSSSFKPPASPVLTLTTLSRQP----SVSEDVDS---NLPSPPP 80
Query: 444 SWVWKLAASTRPHITP 491
S VWK+ P P
Sbjct: 81 S-VWKVPEYVEPKWNP 95
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 39 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 185
P +P+ P S T PP+ TP + TP P+ + + P T
Sbjct: 36 PAPAPTTPTSPATPASGPPIR--TPIPLKETPTPALESAPAAMPDATET 82
>SB_16681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 291 SCATSLLTSSRKWPPL---HPAAPSRSLTN 371
SC ++L SR W +PAAP+RS+T+
Sbjct: 262 SCTSTLSNHSRAWSEKDTGNPAAPARSMTS 291
>SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23)
Length = 1189
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +3
Query: 36 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 185
PP P P + P SC+ T P C +T T SC WT
Sbjct: 920 PPAQPPPMPDMGYSCPSDCHFSCYPQCT--PECCSTTPPTAQCPSSCAWT 967
>SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 27.1 bits (57), Expect = 9.2
Identities = 22/55 (40%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 46 RRHPSRA-LAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHR 207
RRH R L R HR R L R R H RR R R P R R HR
Sbjct: 156 RRHTRRPRLHTRRPRLHRRRTRLHTR--RPRLHTRRPRLHRRRPRLHTRRPRRHR 208
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 303 SLLTSSRKWPPLHPAAPSRSLTNF 374
S L S R P PA PSR L+NF
Sbjct: 1054 SPLKSRRAMDPKDPATPSRKLSNF 1077
>SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 142 DGHGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHGG 35
D G G G + D GGT +R+HG G HGG
Sbjct: 12 DHGGTGRDHGGTRRDHGGT----RRDHGGTGRDHGG 43
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 12 SCSKHSTRPPCTSPSKPC 65
+C H+ R P T+PS PC
Sbjct: 359 ACYSHARREPSTAPSLPC 376
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 27 STRPPCTSPSKPCSRCTRPVVPP-VSCWTPATV-SPTPCPSTKDTHSPTPS 173
+TRP TS +KP + T+P PP + T T P P++ SP P+
Sbjct: 31 ATRPTSTS-TKPTTASTKPTSPPSQAARTRNTAEKPEEKPASSGAASPIPA 80
>SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30)
Length = 3015
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 6 PXSCSKHSTRPPCTSPSKPCSRCTR-PVVPPVSCWTPATVSPTPCPSTKDTHSPT 167
P + +ST P +P+ + T P + P S +T +PT P+ T PT
Sbjct: 29 PTANVTNSTEAPTLAPTSNITNSTEAPTLAPTSNIANSTEAPTLAPTEGPTLGPT 83
>SB_20840| Best HMM Match : Rota_NS26 (HMM E-Value=4.2)
Length = 466
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 291 SCATSLLTSSRKWPPL---HPAAPSRSLTN 371
SC ++L SR W +PAAP+RS+T+
Sbjct: 376 SCTSTLSNHSRAWSEKDTGNPAAPARSMTS 405
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Frame = +3
Query: 24 HSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 143
H TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 70 HKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 115
>SB_18521| Best HMM Match : ig (HMM E-Value=7.5e-11)
Length = 1033
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 29 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 166
NT AI V S S R T I + SG+ ++ TV I + A PH
Sbjct: 345 NTVGSKSAITRVYSPTGSVRPTKIFVKSGESLTLTVGIADLLASPH 390
>SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84)
Length = 244
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = +3
Query: 30 TRPPCTSPSKPCSRCTRPVVPPVSCWT--PATVS---PTPCPSTKDTHSPT 167
T PP T+P P P + T P T+ PT P+T+ T +PT
Sbjct: 153 TEPPVTTPVPTTESTAVPTTAPTTEPTTVPTTIPTTIPTTVPTTEPTTAPT 203
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,696,722
Number of Sequences: 59808
Number of extensions: 447787
Number of successful extensions: 2433
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 1864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2347
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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