Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31873
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             138   3e-35
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   3.3  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   5.7  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   7.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.5  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   7.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.5  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    21   10.0 

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  138 bits (334), Expect = 3e-35
 Identities = 64/64 (100%), Positives = 64/64 (100%)
 Frame = +2

Query: 323 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 502
           EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 60

Query: 503 DVDI 514
           DVDI
Sbjct: 61  DVDI 64


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +3

Query: 330 PPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPR 443
           PP    +     +  P   S LS T  ++A+ L   PR
Sbjct: 678 PPARSPSSQAQASQCPQTASLLSSTHSTLARSLMEGPR 715


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +1

Query: 70  AVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRP 201
           ++  +++HR        C P   +L +I + P HP +  S S P
Sbjct: 62  SLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHPPAS-STSLP 104


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/34 (35%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
 Frame = +1

Query: 157 TP-PRHPASGLSRSRPHRLPHEDPHRARLLVHYH 255
           TP P H   G   S  H  PH     A    H H
Sbjct: 411 TPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQH 444


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 130 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 38
           VGD +A ++ D  G    +  E+G  G   G
Sbjct: 42  VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +1

Query: 337 CIQQLPREVLRTSRRSGHHYRKRKIPLPRGSLPTLVLGYG 456
           C++  P   +   RR  H      IP+P+ +   ++  YG
Sbjct: 32  CVRVSPVITIEPRRRKFHKPITLTIPVPQAANKGMINQYG 71


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 468 MPQASIPKNEGWKRASGQRNLSFPIVMT 385
           + Q  IP +      +G+RN+  PIV +
Sbjct: 165 LKQVKIPHDIAINSTTGKRNVVTPIVQS 192


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 318 SRKWPPLHP 344
           +RK PPLHP
Sbjct: 98  TRKLPPLHP 106


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 125 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 223
           +H +  Y GY  P   +  D A  + T+  MK+
Sbjct: 187 NHQLISYAGYKNPDGTIIGDPANIEFTELCMKL 219


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 79  RVQREHGLDGDVHGG 35
           RV  ++G+ GD +GG
Sbjct: 63  RVYDKNGMTGDAYGG 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,072
Number of Sequences: 438
Number of extensions: 3574
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)