Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31869
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YQN1 Cluster: Putative uncharacterized protein; n=1; ...    34   2.2  
UniRef50_Q74AW3 Cluster: GTP pyrophosphokinase; n=3; Deltaproteo...    32   6.8  

>UniRef50_Q4YQN1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 120

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = -1

Query: 501 VYEFFLSFELITFRRSSNFRLTKKFRCQKRIAMIKFENPYFVS-QHAISYIMYLLRKYNT 325
           +Y FFL  +L T    +N+ L  +F+C K+I  I   N  F+S + ++S+I+  L   + 
Sbjct: 31  IYNFFLHGDLCTC--FANY-LFPRFQCLKKIKQIFIHNVNFLSIKSSLSFIL-KLHSLHI 86

Query: 324 KYEFRNI 304
           +Y F NI
Sbjct: 87  RYTFHNI 93


>UniRef50_Q74AW3 Cluster: GTP pyrophosphokinase; n=3;
           Deltaproteobacteria|Rep: GTP pyrophosphokinase -
           Geobacter sulfurreducens
          Length = 716

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 12/34 (35%), Positives = 24/34 (70%)
 Frame = +3

Query: 414 VFGSEIFSLTENLTSVGKL*ARTKEKIRKQKFYK 515
           +FG+E+ +L + +T +GK+  +TKE+ + + F K
Sbjct: 88  MFGAEVANLVDGVTKIGKIHFKTKEESQAENFRK 121


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,435,131
Number of Sequences: 1657284
Number of extensions: 7682696
Number of successful extensions: 15354
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15351
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)