Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31869
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   0.70 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.1  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   3.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.6  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = +1

Query: 13  LYASQYSVRRTGLKCYLLYLCNNEIYC*NYYFL 111
           +Y+  +      +K  L++     +YC NYY +
Sbjct: 51  IYSKSFHRNEIHIKIVLMFFKEASLYCFNYYVI 83


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 123 YLLFKEIIISTINLIVT 73
           Y +FK +++ TINL +T
Sbjct: 206 YDIFKALVLQTINLQIT 222


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 123 YLLFKEIIISTINLIVT 73
           Y +FK +++ TINL +T
Sbjct: 206 YDIFKALVLQTINLQIT 222


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 422 QRNFFVNRKFDERRKVMSSNER 487
           ++ FF   KFD+R K++S  E+
Sbjct: 385 EQKFFQVSKFDKRSKLVSILEK 406


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 362 LVTLCIYYENTIPNMSSEIFIQVL 291
           +  +C Y+ N IP M   I  Q +
Sbjct: 314 IAKICFYWLNEIPTMPVSIKDQTI 337


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,088
Number of Sequences: 336
Number of extensions: 2312
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)