Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31869
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    27   0.087
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    26   0.20 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    25   0.46 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   2.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   2.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   2.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   3.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   5.7  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   5.7  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 27.5 bits (58), Expect = 0.087
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 395 SRILTLLANTPLVTLCIYYENTIPNMSSEIFIQVLIYSGEKNVL 264
           S +   L  +PL +  +YY NT P M S+     + Y G +++L
Sbjct: 257 SPVTNNLYYSPLASHGLYYVNTAPFMKSQFGENNVQYQGSEDIL 300


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -2

Query: 368 TPLVTLCIYYENTIPNMSSEIFIQVLIYSGEKNVLPRD*NSEGRLTVGSKDDCISNDVFN 189
           +PL +  +YY NT P M SE     + Y G +++     N+E    + SK+  +   + N
Sbjct: 269 SPLSSRSLYYVNTKPFMKSEYGANNVQYQGVQDIF----NTESIAKIMSKNGVLFFGLMN 324


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 239 DLQNFNHVAIHFFH 280
           DL NF HVAI + H
Sbjct: 363 DLHNFGHVAISYIH 376


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -2

Query: 368 TPLVTLCIYYENTIPNMSSEIFIQVLIYSGEKNVL 264
           +P+ +  +YY NT    +S+     + Y G +N+L
Sbjct: 268 SPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNIL 302


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -2

Query: 368 TPLVTLCIYYENTIPNMSSEIFIQVLIYSGEKNVL 264
           +P+ +  +YY NT    +S+     + Y G +N+L
Sbjct: 268 SPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNIL 302


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -2

Query: 368 TPLVTLCIYYENTIPNMSSEIFIQVLIYSGEKNVL 264
           +P+ +  +YY NT    +S+     + Y G +N+L
Sbjct: 268 SPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNIL 302


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -2

Query: 395 SRILTLLANTPLVTLCIYYENTIPNMSSEIFIQVLIYSGEKNV 267
           S +   L  +PL +  +YY N  P M S+     + Y G +++
Sbjct: 260 SPVTNNLYYSPLTSHSLYYVNMEPFMKSQYEENNIEYEGIQDI 302


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 145 ALQNYNKFNN 174
           AL +YNKFNN
Sbjct: 300 ALGSYNKFNN 309


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 145 ALQNYNKFNN 174
           AL +YNKFNN
Sbjct: 353 ALGSYNKFNN 362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,110
Number of Sequences: 438
Number of extensions: 2632
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)