Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31868
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   3.7  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   6.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +1

Query: 16  F*HFTIHNFYNCTG*AHDVGKAVLVFNRLPDV 111
           F HF I  F   T   H VG A+L+F  LPD+
Sbjct: 164 FSHFLIVFF---TETLHTVGIALLIFYILPDL 192


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +1

Query: 16  F*HFTIHNFYNCTG*AHDVGKAVLVFNRLPDV 111
           F HF I  F   T   H VG A+L+F  LPD+
Sbjct: 164 FSHFLIVFF---TETLHTVGIALLIFYILPDL 192


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +1

Query: 16  F*HFTIHNFYNCTG*AHDVGKAVLVFNRLPDV 111
           F HF I  F   T   H VG A+L+F  LPD+
Sbjct: 164 FSHFLIVFF---TETLHTVGIALLIFYILPDL 192


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +1

Query: 16  F*HFTIHNFYNCTG*AHDVGKAVLVFNRLPDV 111
           F HF I  F   T   H VG A+L+F  LPD+
Sbjct: 164 FSHFLIVFF---TETLHTVGIALLIFYILPDL 192


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 431 WYRNFCASRGRQTESLN 481
           +YR FCA     T+ LN
Sbjct: 544 FYRKFCARYSAATQDLN 560


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -3

Query: 175 IQIEHINATSHSVRNVNSHYVVHPVAG*KLVPLF 74
           IQ+  +++    +R   SH++   V G  L  +F
Sbjct: 75  IQVGDVSSVLKFIRKYGSHFIESYVTGNALYQVF 108


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 419 FCWYWYRNFCASRGRQTESLN 481
           FC+YW     A   R  +S N
Sbjct: 326 FCFYWLLVMVAMFSRTQQSAN 346


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 250 INTDHGPDIHSHP 212
           +  DHG + H HP
Sbjct: 1   MRNDHGSNTHLHP 13


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 419 FCWYWYRNFCASRGRQTESLN 481
           FC+YW     A   R  +S N
Sbjct: 282 FCFYWLLVMVAMFSRTQQSAN 302


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 250 INTDHGPDIHSHP 212
           +  DHG + H HP
Sbjct: 1   MRNDHGSNTHLHP 13


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,845
Number of Sequences: 336
Number of extensions: 2254
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)