Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31866
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...   242   1e-66
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...   151   3e-39
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...   150   8e-39
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.70 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   4.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score =  242 bits (592), Expect = 1e-66
 Identities = 98/112 (87%), Positives = 107/112 (95%)
 Frame = +3

Query: 3   YFHAAWLKNNPEFLEAFLYWIDEILQSHNDVYFVTMTQVIQWVQNPRTVTEAKNFEPWRE 182
           YFHAAWLKNNPEFL+AFLYW+DEIL +HNDVYFVTMTQVIQW+QNPRT+TE+KNFEPWRE
Sbjct: 423 YFHAAWLKNNPEFLDAFLYWVDEILANHNDVYFVTMTQVIQWIQNPRTITESKNFEPWRE 482

Query: 183 KCSVEGNPACWVPHSCKLTSKEVPGETINLQTCLRCPVNYPWLNDPTGDGHY 338
           KC VEGNP CWVPHSCKLTSKEVPGETINLQTC+RCP NYPW+NDPTGDG +
Sbjct: 483 KCVVEGNPHCWVPHSCKLTSKEVPGETINLQTCVRCPNNYPWVNDPTGDGFF 534


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score =  151 bits (367), Expect = 3e-39
 Identities = 61/110 (55%), Positives = 84/110 (76%)
 Frame = +3

Query: 3   YFHAAWLKNNPEFLEAFLYWIDEILQSHNDVYFVTMTQVIQWVQNPRTVTEAKNFEPWRE 182
           +FHA+WLK+  EF E  + +I+E+LQ  NDVYFVT  QVIQW+QNP  +   ++F+ W+E
Sbjct: 415 HFHASWLKSKKEFKEELIKFIEEMLQ-RNDVYFVTNLQVIQWMQNPTELNGLRDFQEWKE 473

Query: 183 KCSVEGNPACWVPHSCKLTSKEVPGETINLQTCLRCPVNYPWLNDPTGDG 332
           KC ++G P C +P+SC LT++E+PGET+ L TC+ CP NYPW+ DPTGDG
Sbjct: 474 KCDIKGQPYCSLPNSCALTTRELPGETLRLFTCMECPNNYPWILDPTGDG 523


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score =  150 bits (363), Expect = 8e-39
 Identities = 60/110 (54%), Positives = 84/110 (76%)
 Frame = +3

Query: 3   YFHAAWLKNNPEFLEAFLYWIDEILQSHNDVYFVTMTQVIQWVQNPRTVTEAKNFEPWRE 182
           +FHA+WLK+  EF E  + +I+E+LQ  NDVYFVT  QVIQW+QNP  +   ++F+ W+E
Sbjct: 422 HFHASWLKSKKEFKEELIKFIEEMLQ-RNDVYFVTNLQVIQWMQNPTELNGLRDFQEWKE 480

Query: 183 KCSVEGNPACWVPHSCKLTSKEVPGETINLQTCLRCPVNYPWLNDPTGDG 332
           KC ++G P C +P+SC LT++E+PGET+ L TC+ CP NYPW+ +PTGDG
Sbjct: 481 KCDIKGQPYCSLPNSCALTTRELPGETLRLFTCMECPNNYPWILEPTGDG 530


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 154  KPRTSSRGEKSAPSKETLHAGYLIPASS 237
            KP+        +PSK  + AGY +PA S
Sbjct: 2475 KPKNLLLSAAVSPSKAVMDAGYDVPALS 2502



 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 154  KPRTSSRGEKSAPSKETLHAGYLIP 228
            KP+        +PSK  + AGY +P
Sbjct: 1552 KPKGYLLSAAVSPSKTVIDAGYDVP 1576


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +2

Query: 263 HQFTNLFEMPSQLPLVKRPH 322
           H++T+  ++  + P +KRP+
Sbjct: 292 HKYTHEIKLHDKTPFLKRPY 311


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -1

Query: 354 RSWLLNSGHRPWGRL 310
           R W     HRPW +L
Sbjct: 526 RPWQTVYNHRPWQQL 540


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,863
Number of Sequences: 336
Number of extensions: 2918
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)