Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31861
(386 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zi... 45 2e-05
At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zi... 45 2e-05
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 42 1e-04
At5g03660.1 68418.m00325 expressed protein low similarity to out... 42 1e-04
At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zi... 41 3e-04
At1g67230.1 68414.m07652 expressed protein 40 4e-04
At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911... 40 6e-04
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 34 0.038
At1g77580.1 68414.m09033 myosin heavy chain-related low similari... 34 0.038
At5g26770.2 68418.m03191 expressed protein 33 0.050
At5g26770.1 68418.m03190 expressed protein 33 0.050
At3g05270.1 68416.m00575 expressed protein similar to endosome-a... 33 0.088
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 32 0.12
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 32 0.12
At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identi... 32 0.15
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 32 0.15
At3g05130.1 68416.m00557 expressed protein ; expression supporte... 32 0.15
At4g36270.1 68417.m05158 ATP-binding region, ATPase-like domain-... 31 0.20
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 31 0.20
At2g42480.1 68415.m05255 meprin and TRAF homology domain-contain... 31 0.27
At1g47900.1 68414.m05334 expressed protein 31 0.27
At4g31570.1 68417.m04483 expressed protein 31 0.36
At4g09060.1 68417.m01493 expressed protein 31 0.36
At3g61500.1 68416.m06888 hypothetical protein 31 0.36
At1g09470.1 68414.m01059 expressed protein ; expression supporte... 31 0.36
At1g18190.1 68414.m02262 expressed protein similar to golgin-84 ... 30 0.47
At5g61070.1 68418.m07663 histone deacetylase family protein (HDA... 30 0.62
At5g55860.1 68418.m06963 expressed protein contains Pfam profile... 30 0.62
At3g15950.1 68416.m02017 DNA topoisomerase-related similar to DN... 30 0.62
At5g64180.1 68418.m08058 expressed protein 29 0.82
At3g32190.1 68416.m04102 hypothetical protein 29 0.82
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 29 0.82
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 29 0.82
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 29 0.82
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 29 0.82
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea... 29 1.1
At4g28715.1 68417.m04107 myosin heavy chain, putative similar to... 29 1.1
At3g54170.1 68416.m05988 FKBP12 interacting protein (FIP37) iden... 29 1.1
At3g19370.1 68416.m02457 expressed protein 29 1.1
At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase fami... 29 1.1
At1g58025.1 68414.m06576 DNA-binding bromodomain-containing prot... 29 1.1
At1g22770.1 68414.m02845 gigantea protein (GI) identical to giga... 29 1.1
At1g13790.1 68414.m01619 XH/XS domain-containing protein / XS zi... 29 1.1
At5g60850.1 68418.m07633 Dof-type zinc finger domain-containing ... 29 1.4
At5g41310.1 68418.m05020 kinesin motor protein-related 29 1.4
At4g27180.1 68417.m03904 kinesin-like protein B (KATB) 29 1.4
At5g27330.1 68418.m03263 expressed protein 28 1.9
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 28 1.9
At1g68790.1 68414.m07863 expressed protein 28 2.5
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 28 2.5
At5g59210.2 68418.m07421 myosin heavy chain-related contains wea... 27 3.3
At3g61570.1 68416.m06896 intracellular protein transport protein... 27 3.3
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 27 3.3
At2g37630.1 68415.m04616 myb family transcription factor (MYB91)... 27 3.3
At2g06005.2 68415.m00656 expressed protein 27 3.3
At2g06005.1 68415.m00655 expressed protein 27 3.3
At1g22260.1 68414.m02782 expressed protein 27 3.3
At1g22060.1 68414.m02759 expressed protein 27 3.3
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 27 3.3
At5g66810.1 68418.m08423 expressed protein similar to unknown pr... 27 4.4
At5g32590.1 68418.m03867 myosin heavy chain-related similar to M... 27 4.4
At5g07660.1 68418.m00877 structural maintenance of chromosomes (... 27 4.4
At3g47660.1 68416.m05188 regulator of chromosome condensation (R... 27 4.4
At2g46180.1 68415.m05742 intracellular protein transport protein... 27 4.4
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 27 4.4
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative... 27 5.8
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 27 5.8
At5g39790.1 68418.m04820 5'-AMP-activated protein kinase beta-1 ... 27 5.8
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 27 5.8
At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family pr... 27 5.8
At3g23980.1 68416.m03012 dentin sialophosphoprotein-related cont... 27 5.8
At2g47230.1 68415.m05898 agenet domain-containing protein contai... 27 5.8
At1g80810.1 68414.m09481 expressed protein similar to androgen-i... 27 5.8
At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger) fa... 27 5.8
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 27 5.8
At4g11420.1 68417.m01840 eukaryotic translation initiation facto... 26 7.6
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 26 7.6
At3g48860.2 68416.m05337 expressed protein 26 7.6
At3g48860.1 68416.m05336 expressed protein 26 7.6
At1g28410.1 68414.m03493 expressed protein 26 7.6
At1g26300.2 68414.m03207 BSD domain-containing protein contains ... 26 7.6
At1g26300.1 68414.m03206 BSD domain-containing protein contains ... 26 7.6
At1g12840.1 68414.m01491 vacuolar ATP synthase subunit C (VATC) ... 26 7.6
>At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 44.8 bits (101), Expect = 2e-05
Identities = 26/123 (21%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Frame = +2
Query: 20 RVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEI---TKELRIADE 190
++KR +E + ++ + + NEL V+ + + K+ ++L A+ + E + ADE
Sbjct: 334 KLKRLLESERKKLEIKCNELAKREVHNGTERMKLSEDLEQNASKNSSLELAAMEQQKADE 393
Query: 191 RYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRIIS 370
+++ + + E LHE+ R+ + K+++E+EV+ + +L ++ A G ++
Sbjct: 394 EVKKLAEDQRRQKEELHEKIIRLERQRDQKQAIELEVEQLKGQLNVMKHMASDGDAEVVK 453
Query: 371 KLE 379
+++
Sbjct: 454 EVD 456
>At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 44.8 bits (101), Expect = 2e-05
Identities = 26/123 (21%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Frame = +2
Query: 20 RVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEI---TKELRIADE 190
++KR +E + ++ + + NEL V+ + + K+ ++L A+ + E + ADE
Sbjct: 334 KLKRLLESERKKLEIKCNELAKREVHNGTERMKLSEDLEQNASKNSSLELAAMEQQKADE 393
Query: 191 RYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRIIS 370
+++ + + E LHE+ R+ + K+++E+EV+ + +L ++ A G ++
Sbjct: 394 EVKKLAEDQRRQKEELHEKIIRLERQRDQKQAIELEVEQLKGQLNVMKHMASDGDAEVVK 453
Query: 371 KLE 379
+++
Sbjct: 454 EVD 456
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 42.3 bits (95), Expect = 1e-04
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Frame = +2
Query: 8 EQALRVKRSVEQQYE-ESQTRVNEL-TVIN------VNLSSSKAKIEQELAIVAADYDEI 163
E+ L R + + ++ ES TR++EL T + V+LS+S E+E +++ EI
Sbjct: 466 ERELTGLRDIHETHQRESSTRLSELETQLKLLEQRVVDLSASLNAAEEEKKSLSSMILEI 525
Query: 164 TKELRIADERYQRVQTEL---KHTVEHLHEEQERIVKI-EAVKKSLEIEVKNISVRLEEV 331
T EL+ A + Q + TEL K T+ E V++ EA K+ +VK + R+E
Sbjct: 526 TDELKQAQSKVQELVTELAESKDTLTQKENELSSFVEVHEAHKRDSSSQVKELEARVESA 585
Query: 332 E 334
E
Sbjct: 586 E 586
Score = 33.5 bits (73), Expect = 0.050
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Frame = +2
Query: 8 EQALRVKRSVEQQYEESQTRVNELTVI-------NVNLSSSKAKIEQELAIVAADYDEIT 166
E + RV +E Q E S+ R+++LTV N +SS +I +L E+
Sbjct: 327 ESSTRVSE-LEAQLESSEQRISDLTVDLKDAEEENKAISSKNLEIMDKLEQAQNTIKELM 385
Query: 167 KELRIADERYQRVQTELKHTVEHLHEE----QERIVKIEAVKKSLEIEVKNISVRLEEVE 334
EL +R++ ++EL V+ ++ ++ + E KK L + +IS ++E +
Sbjct: 386 DELGELKDRHKEKESELSSLVKSADQQVADMKQSLDNAEEEKKMLSQRILDISNEIQEAQ 445
>At5g03660.1 68418.m00325 expressed protein low similarity to outer
surface protein F [Borrelia burgdorferi] GI:466482;
contains Pfam profile PF04949: Family of unknown
function (DUF662)
Length = 173
Score = 42.3 bits (95), Expect = 1e-04
Identities = 24/109 (22%), Positives = 52/109 (47%)
Frame = +2
Query: 8 EQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIAD 187
++ + ++ V+ Q + L +I L + +E+ +V D + KEL+
Sbjct: 56 KKKMEIRERVQAQLGRVEDESKRLAMIREELEGFADPMRKEVTMVRKKIDSLDKELKPLG 115
Query: 188 ERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVE 334
Q+ +TE K +E +E+ + K+E + K E+E ++ R +++E
Sbjct: 116 NTVQKKETEYKDALEAFNEKNKE--KVELITKLQELEGESEKFRFKKLE 162
>At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 635
Score = 40.7 bits (91), Expect = 3e-04
Identities = 28/127 (22%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
Frame = +2
Query: 20 RVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDE---ITKELRIADE 190
R+ E+Q + ++++ EL + + L+ +A+ E + IVA + ++ I ++++
Sbjct: 320 RIFADHEKQKVQLESQIKELEIRKLELAKREAENETQRKIVAKELEQNAAINSYVQLSAL 379
Query: 191 RYQRVQTELKH-TVEHLHEEQERIVKIEAV---KKSLEIEVKNISVRLEEVEANAIVGGK 358
Q+ + + + V+H + +RI +E K+ LE+EV+ + +L + + G
Sbjct: 380 EQQKTREKAQRLAVDHKEKLHKRIAALERQLDQKQELELEVQQLKSQLSVMRLVELDSGS 439
Query: 359 RIISKLE 379
I++K+E
Sbjct: 440 EIVNKVE 446
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 40.3 bits (90), Expect = 4e-04
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Frame = +2
Query: 29 RSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADER---YQ 199
+S E+ E + ++ E I +NL + K+ E ++ ++ ELR+ +E Y
Sbjct: 428 KSEEKALETEKKKLLEDKEIILNLKALVEKVSGENQAQLSEINKEKDELRVTEEERSEYL 487
Query: 200 RVQTELKHTVEHLHEEQERIVK----IEAVKKSLEIEVKNISVRLEEV 331
R+QTELK +E +QE + K ++A ++S E E + + R ++
Sbjct: 488 RLQTELKEQIEKCRSQQELLQKEAEDLKAQRESFEKEWEELDERKAKI 535
Score = 35.9 bits (79), Expect = 0.009
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Frame = +2
Query: 17 LRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERY 196
LRV +Y QT + E S + +++E + A + KE DER
Sbjct: 476 LRVTEEERSEYLRLQTELKEQIE---KCRSQQELLQKEAEDLKAQRESFEKEWEELDERK 532
Query: 197 QRVQTELKHTVE-------HLHEEQERIVK-IEAVKKSLEIEVKNISV 316
++ ELK+ + H+H E+ER+ K +A +++E E++ + V
Sbjct: 533 AKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENMERELETLEV 580
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 32 SVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAAD 151
S + Q ES+T E+ V NVN ++ I + VAAD
Sbjct: 843 SFDVQKAESETGTKEVEVTNVNSDGDQSDINSKAQEVAAD 882
>At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911:
Plant protein of unknown function (DUF869)
Length = 982
Score = 39.9 bits (89), Expect = 6e-04
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 19/143 (13%)
Frame = +2
Query: 8 EQALRVKRSVEQQYEES-----QTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKE 172
++ +R RS++++ E+ T+ N++ + S + E+EL A+ D +++
Sbjct: 136 KECMRQIRSLKEENEQKLHDVIATKTNQMDNLRAEFESRIGEYEEELLRCGAENDALSRS 195
Query: 173 L--------RIADERYQRVQTELKHTVEHLH--EEQERIVKIEA--VKKSLEI--EVKNI 310
L RI++E+ Q ++E++H ++ E + +K E + K LEI E KN+
Sbjct: 196 LQERSNMLMRISEEKSQ-AESEIEHLKNNIESCEREINTLKYETHVITKELEIRNEEKNM 254
Query: 311 SVRLEEVEANAIVGGKRIISKLE 379
S+R E + G + I+KLE
Sbjct: 255 SMRSAEAANKQHLEGVKKIAKLE 277
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 33.9 bits (74), Expect = 0.038
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Frame = +2
Query: 26 KRSVEQQYEESQTRVN-ELTVINVN----LSSSKAKIEQELAIVAADYDEITKELRIADE 190
K E+ E++ + N E V+++ L+S ++E++L + A+ +E+ E++ E
Sbjct: 361 KLEAEKHELENEVKCNREEAVVHIENSEVLTSRTKELEEKLEKLEAEKEELKSEVKCNRE 420
Query: 191 R-YQRVQTELKHTVEHL----HEEQERIVKIEAVKKSLEIEVK 304
+ V+ L +E L E +E++ K+EA K LE EVK
Sbjct: 421 KAVVHVENSLAAEIEVLTSRTKELEEQLEKLEAEKVELESEVK 463
Score = 32.3 bits (70), Expect = 0.12
Identities = 22/107 (20%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = +2
Query: 11 QALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAK-IEQELAIVAADYDEITKELRIAD 187
+ + ++ V+ EE+ +V + + + + K +E++L + + DE+ E++
Sbjct: 454 EKVELESEVKCNREEAVAQVENSLATEIEVLTCRIKQLEEKLEKLEVEKDELKSEVKCNR 513
Query: 188 ERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEE 328
E ++ EL+ E + ++ K+E K L+I I + EE
Sbjct: 514 EVESTLRFELEAIACEKMELENKLEKLEVEKAELQISFDIIKDKYEE 560
Score = 29.5 bits (63), Expect = 0.82
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +2
Query: 155 DEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVK-NISVRLEEV 331
+ +T+E+ + E + +E++ + E +E++ K+EA K LE EVK N + +
Sbjct: 327 ESVTEEVVVPSEN--SLASEIEVLTSRIKELEEKLEKLEAEKHELENEVKCNREEAVVHI 384
Query: 332 EANAIVGG--KRIISKLE 379
E + ++ K + KLE
Sbjct: 385 ENSEVLTSRTKELEEKLE 402
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/71 (22%), Positives = 36/71 (50%)
Frame = +2
Query: 98 LSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAV 277
L KA+++ I+ Y+E L+ + + +QTE+K E E + + + +EA
Sbjct: 540 LEVEKAELQISFDIIKDKYEESQVCLQEIETKLGEIQTEMKLVNELKAEVESQTIAMEAD 599
Query: 278 KKSLEIEVKNI 310
K+ +++++
Sbjct: 600 AKTKSAKIESL 610
>At1g77580.1 68414.m09033 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 629
Score = 33.9 bits (74), Expect = 0.038
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Frame = +2
Query: 26 KRSVEQQYEESQTRVN-ELTVINVN----LSSSKAKIEQELAIVAADYDEITKELRIADE 190
K E+ E++ + N E V+++ L+S ++E++L + A+ +E+ E++ E
Sbjct: 327 KLEAEKHELENEVKCNREEAVVHIENSEVLTSRTKELEEKLEKLEAEKEELKSEVKCNRE 386
Query: 191 R-YQRVQTELKHTVEHL----HEEQERIVKIEAVKKSLEIEVK 304
+ V+ L +E L E +E++ K+EA K LE EVK
Sbjct: 387 KAVVHVENSLAAEIEVLTSRTKELEEQLEKLEAEKVELESEVK 429
Score = 32.3 bits (70), Expect = 0.12
Identities = 22/107 (20%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = +2
Query: 11 QALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAK-IEQELAIVAADYDEITKELRIAD 187
+ + ++ V+ EE+ +V + + + + K +E++L + + DE+ E++
Sbjct: 420 EKVELESEVKCNREEAVAQVENSLATEIEVLTCRIKQLEEKLEKLEVEKDELKSEVKCNR 479
Query: 188 ERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEE 328
E ++ EL+ E + ++ K+E K L+I I + EE
Sbjct: 480 EVESTLRFELEAIACEKMELENKLEKLEVEKAELQISFDIIKDKYEE 526
Score = 29.5 bits (63), Expect = 0.82
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +2
Query: 155 DEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVK-NISVRLEEV 331
+ +T+E+ + E + +E++ + E +E++ K+EA K LE EVK N + +
Sbjct: 293 ESVTEEVVVPSEN--SLASEIEVLTSRIKELEEKLEKLEAEKHELENEVKCNREEAVVHI 350
Query: 332 EANAIVGG--KRIISKLE 379
E + ++ K + KLE
Sbjct: 351 ENSEVLTSRTKELEEKLE 368
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/71 (22%), Positives = 36/71 (50%)
Frame = +2
Query: 98 LSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAV 277
L KA+++ I+ Y+E L+ + + +QTE+K E E + + + +EA
Sbjct: 506 LEVEKAELQISFDIIKDKYEESQVCLQEIETKLGEIQTEMKLVNELKAEVESQTIAMEAD 565
Query: 278 KKSLEIEVKNI 310
K+ +++++
Sbjct: 566 AKTKSAKIESL 576
>At5g26770.2 68418.m03191 expressed protein
Length = 335
Score = 33.5 bits (73), Expect = 0.050
Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Frame = +2
Query: 23 VKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQR 202
+++ +E+ ++ R+N L + AK++ ++ +++A + TKEL ER +R
Sbjct: 196 LRKLLEEVSPKNFERMNMLLAVK---DEEIAKLKDDVKLMSAHWKLKTKELESQLERQRR 252
Query: 203 VQTELKHTVEH----LHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKR 361
ELK V L E + + K++ + + +K +S ++ + N V G++
Sbjct: 253 ADQELKKKVLKLEFCLQEARSQTRKLQRAGERRDKAIKELSDQITGKQLNESVSGEK 309
>At5g26770.1 68418.m03190 expressed protein
Length = 335
Score = 33.5 bits (73), Expect = 0.050
Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Frame = +2
Query: 23 VKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQR 202
+++ +E+ ++ R+N L + AK++ ++ +++A + TKEL ER +R
Sbjct: 196 LRKLLEEVSPKNFERMNMLLAVK---DEEIAKLKDDVKLMSAHWKLKTKELESQLERQRR 252
Query: 203 VQTELKHTVEH----LHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKR 361
ELK V L E + + K++ + + +K +S ++ + N V G++
Sbjct: 253 ADQELKKKVLKLEFCLQEARSQTRKLQRAGERRDKAIKELSDQITGKQLNESVSGEK 309
>At3g05270.1 68416.m00575 expressed protein similar to
endosome-associated protein (EEA1) (GI:1016368) [Homo
sapiens]; similar to smooth muscle myosin heavy chain
(GI:4417214) [Homo sapiens; contains Pfam profile
PF05911: Plant protein of unknown function (DUF869)
Length = 615
Score = 32.7 bits (71), Expect = 0.088
Identities = 23/106 (21%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Frame = +2
Query: 80 TVINVNLSSSKAKIEQELAIVAAD----YDEITKELRIADERYQRVQTELKHTVEHLHEE 247
T +++ L ++E+ A+ ++ + E KEL ++ +++ ELK ++ + E
Sbjct: 299 TSVDIGLMDDFLEMEKLAALPHSEPGRKHSESNKELEKSNAHVNQLKHELKTSLRRISEL 358
Query: 248 QERIVKIEAVKKSLEIEVKNISVRLEEVEA--NAIVGGKRIISKLE 379
+E++ +E K LE+ + ++E +++ I G + KLE
Sbjct: 359 EEKVEMVEVEKLQLEMALNGSKEQIEALQSRLKEIEGKLSEMKKLE 404
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 32.3 bits (70), Expect = 0.12
Identities = 20/96 (20%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 5 YEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIA 184
+++A + + ++++ ++ R E+ SS + ++QEL +E K +
Sbjct: 162 HKRAKQRIQEIQKEKDDLDARFREVNETAERASSQHSSMQQELERTRQQANEALKAMDAE 221
Query: 185 DERYQRVQTELKHTVEHLHEE-QERIVKIEAVKKSL 289
++ + +L+ T+E L Q + KIE +++SL
Sbjct: 222 RQQLRSANNKLRDTIEELRGSLQPKENKIETLQQSL 257
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 32.3 bits (70), Expect = 0.12
Identities = 20/96 (20%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 5 YEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIA 184
+++A + + ++++ ++ R E+ SS + ++QEL +E K +
Sbjct: 162 HKRAKQRIQEIQKEKDDLDARFREVNETAERASSQHSSMQQELERTRQQANEALKAMDAE 221
Query: 185 DERYQRVQTELKHTVEHLHEE-QERIVKIEAVKKSL 289
++ + +L+ T+E L Q + KIE +++SL
Sbjct: 222 RQQLRSANNKLRDTIEELRGSLQPKENKIETLQQSL 257
>At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identical
to PRLI-interacting factor K [Arabidopsis thaliana]
GI:11139266; contains Pfam profiles PF03152: Ubiquitin
fusion degradation protein UFD1, PF00096: Zinc finger,
C2H2 type
Length = 561
Score = 31.9 bits (69), Expect = 0.15
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +2
Query: 170 ELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEA 337
ELR A E+ +R Q E K + L E+E+ K A+K+ IE + RL+ +EA
Sbjct: 4 ELRSAKEKLEREQRERKQRAK-LKLEREKKSKEAAIKQREAIEAAQRARRLDAIEA 58
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 31.9 bits (69), Expect = 0.15
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +2
Query: 50 EESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTV 229
+ S+ RV++L + + +K+E ELAIV ++ E KE + ++ + E+ +
Sbjct: 451 QASRDRVSDLETMLDESRALCSKLESELAIVHEEWKE-AKERYERNLDAEKQKNEISASE 509
Query: 230 EHLHEEQERIVK--IEAVKKSL-EIEVKNISVRLEEVE 334
L ++ R VK +E V L E VKN S++ E VE
Sbjct: 510 LALEKDLRRRVKDELEGVTHELKESSVKNQSLQKELVE 547
>At3g05130.1 68416.m00557 expressed protein ; expression supported
by MPSS
Length = 634
Score = 31.9 bits (69), Expect = 0.15
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = +2
Query: 71 NELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQ 250
N+L + +L S K+E+EL + + + EL A +R LK L + +
Sbjct: 491 NDLESQSESLKSENVKLEKELVELRKAMEALKTELESAGMDAKRSMVMLKSAASMLSQLE 550
Query: 251 ERIVKIEAVKKSLEIEVKNISVRLEEVE 334
R ++ + ++ EI + ++ LE +E
Sbjct: 551 NREDRLISEEQKREIGTEPYAMELESIE 578
>At4g36270.1 68417.m05158 ATP-binding region, ATPase-like
domain-containing protein low similarity to microrchidia
[Mus musculus] GI:5410255; contains Pfam profile
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein
Length = 625
Score = 31.5 bits (68), Expect = 0.20
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 92 VNLSSSKAKIEQELAIVAADYDEITKE---LRIADERYQRVQTELKHTVEHLHEEQERIV 262
V L+ A + E +V EI++E L + E Y + +TEL+ TV +L +E E
Sbjct: 532 VQLNPQPAATDTENNLVGKSAHEISEENIQLFMRCEEYVKKETELEQTVSNLAKELEE-T 590
Query: 263 KIEAVKKSLEIEVKNISVRLEE 328
K + + +L ++ K ++ E+
Sbjct: 591 KSKCARLALLVDAKRREMQQED 612
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 31.5 bits (68), Expect = 0.20
Identities = 22/95 (23%), Positives = 51/95 (53%)
Frame = +2
Query: 44 QYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKH 223
+ E S+ ++ EL + +S+ +A+ +EL +A E+ ++L+I+DERY + L
Sbjct: 91 ELENSRKKMIELED-RIRISALEAEKLEELQKQSAS--ELEEKLKISDERYSKTDALLSQ 147
Query: 224 TVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEE 328
+ ++++ +E + + + E+K+ + EE
Sbjct: 148 ALSQNSVLEQKLKSLEELSEKVS-ELKSALIVAEE 181
>At2g42480.1 68415.m05255 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 743
Score = 31.1 bits (67), Expect = 0.27
Identities = 24/116 (20%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = +2
Query: 38 EQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTEL 217
EQ EE + + + L S K+K+++ YD ++ +ER + ++ L
Sbjct: 260 EQDIEERLKNLEGME-FDSKLDSLKSKLDEISLERKKSYDADGSRVQQLEERVKDIELIL 318
Query: 218 KHTVEHLHEEQERIV----KIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRIISK 373
K +E + E+++ +E K+LE+ V ++ V ++ +A + G ++ +
Sbjct: 319 KSKLEEVSSEKKKKADADGSLEDRVKNLELMVSDLKVEVDNEKAKSSADGFLLVEE 374
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 31.1 bits (67), Expect = 0.27
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
Frame = +2
Query: 47 YEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTE---- 214
++ + ++ ++ + + EQEL AAD D +++ L+ +V E
Sbjct: 204 HDVALSKTKQIEKMTMEFEKRMCDYEQELLRSAADSDALSRTLQERSNMLVKVSEEKSRA 263
Query: 215 ------LKHTVEHLHEEQERI-VKIEAVKKSLEI--EVKNISVRLEEVEANAIVGGKRII 367
LK +E E + + ++ V K LEI E KN+ +R E + G + I
Sbjct: 264 DAEIETLKSNLEMCEREIKSLKYEVHVVSKELEIRNEEKNMCIRSAESANKQHLEGVKKI 323
Query: 368 SKLE 379
+KLE
Sbjct: 324 AKLE 327
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 30.7 bits (66), Expect = 0.36
Identities = 20/109 (18%), Positives = 47/109 (43%)
Frame = +2
Query: 2 NYEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRI 181
++E ++ + + + + L + N N+S ++ ++L + DE+ +L
Sbjct: 982 SFEALKHYSYELQHKNHDLELLCDSLKLRNDNISVENTELNKKLNYCSLRIDELEIQLEN 1041
Query: 182 ADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEE 328
+ + ++ + L +E ER + +E SL E VRL++
Sbjct: 1042 LQQNLTSFLSTMEEQLVALQDESERAMMVEHELTSLMSEFGEAVVRLDD 1090
>At4g09060.1 68417.m01493 expressed protein
Length = 341
Score = 30.7 bits (66), Expect = 0.36
Identities = 23/95 (24%), Positives = 48/95 (50%)
Frame = +2
Query: 95 NLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEA 274
NL S K+E+E + D D + + +DER + + ++ + + E + + +
Sbjct: 106 NLLSQCKKLEKECLLYHQDRDALMEFGNESDERAREAEARVRELEDEIGRMSEEMQRFK- 164
Query: 275 VKKSLEIEVKNISVRLEEVEANAIVGGKRIISKLE 379
++ + EV+N + LEE ++++G +ISK E
Sbjct: 165 -RQIGDGEVENCTTPLEEDLLDSVLGS--LISKDE 196
>At3g61500.1 68416.m06888 hypothetical protein
Length = 279
Score = 30.7 bits (66), Expect = 0.36
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +2
Query: 38 EQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTEL 217
++ + + QT VN T VN+S+ + QEL VAA ++ ++ D+ VQ
Sbjct: 166 KKDFLDLQTIVNVKT--RVNISTDGTMVLQELESVAAKMKKMYLTIQEGDD---LVQESF 220
Query: 218 KHTVEHLHEEQERI 259
K ++E EE E++
Sbjct: 221 KESIEECKEEVEKL 234
>At1g09470.1 68414.m01059 expressed protein ; expression supported
by MPSS
Length = 336
Score = 30.7 bits (66), Expect = 0.36
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 23 VKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQR 202
V+ + + ++ R+N+L A++ EL I++A + TKEL E +R
Sbjct: 197 VRNMLNEDTPKNSERINKLLTAK---DDEIARLRDELKIISAHWRFKTKELEDQVENQRR 253
Query: 203 VQTELKHTV 229
+ ELK V
Sbjct: 254 IDQELKKKV 262
>At1g18190.1 68414.m02262 expressed protein similar to golgin-84
{Homo sapiens} (GI:4191344)
Length = 668
Score = 30.3 bits (65), Expect = 0.47
Identities = 15/77 (19%), Positives = 38/77 (49%)
Frame = +2
Query: 98 LSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAV 277
L+ +++ + + AD + + KEL E ++ L +HL ++Q ++ + +
Sbjct: 479 LTDKIGRLQDKATKLEADIEMMRKELEEPTEVEIELKRRLNQLTDHLIQKQSQVEALSSE 538
Query: 278 KKSLEIEVKNISVRLEE 328
K ++ ++ +S +EE
Sbjct: 539 KATILFRIEAVSRLIEE 555
>At5g61070.1 68418.m07663 histone deacetylase family protein (HDA18)
identical to HDA18 [Arabidopsis thaliana] GI:21105769;
similar to SP|Q9UBN7 Histone deacetylase 6 (HD6) {Homo
sapiens}; contains Pfam profile PF00850: Histone
deacetylase family
Length = 682
Score = 29.9 bits (64), Expect = 0.62
Identities = 25/100 (25%), Positives = 42/100 (42%)
Frame = +2
Query: 38 EQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTEL 217
E++ E + + L + ++QE A + I KEL+ R Q + +
Sbjct: 475 EKELEAGLMLIRAREDVICGLHAKIESLQQERDEAVAKAERIDKELQEDRARSQEFKEDT 534
Query: 218 KHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEA 337
+ + L E+E + I A K LE + K + RL V A
Sbjct: 535 EFCLSTLRREKE--LAIMAKNKDLEAKEKELEARLMLVHA 572
>At5g55860.1 68418.m06963 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 649
Score = 29.9 bits (64), Expect = 0.62
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +2
Query: 116 KIEQELAIVAADYDEITKELRIAD----ERYQRVQTELKHTVEHLHEEQERIVKIEAVKK 283
K+E +L + DE+ K++ A + V EL + E ++ + +
Sbjct: 271 KLEVQLTETYNEIDELQKQMETAKASDIDSVNGVSLELNEAKGLFEKLVEEEKSLQELVE 330
Query: 284 SLEIEVKNISVRLEEVEA 337
SL+ E+KN+ + +EVEA
Sbjct: 331 SLKAELKNVKMEHDEVEA 348
>At3g15950.1 68416.m02017 DNA topoisomerase-related similar to DNA
topoisomerase IV subunit A (GI:26454107) [Mycoplasma
penetrans]
Length = 772
Score = 29.9 bits (64), Expect = 0.62
Identities = 25/109 (22%), Positives = 50/109 (45%)
Frame = +2
Query: 32 SVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQT 211
++E+++E +L +++ +KA+ + E A + DEI +E A +++
Sbjct: 308 AIEREFEAVTESFKQLE----DIADNKAEGDDESAKRQSMLDEIEREFEAATNSLKQLNL 363
Query: 212 ELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGK 358
+ + E R +EA+++ E K LEE++AN G K
Sbjct: 364 DDFSEGDDSAESARRNSMLEAIEREFEAATKG----LEELKANDSTGDK 408
>At5g64180.1 68418.m08058 expressed protein
Length = 158
Score = 29.5 bits (63), Expect = 0.82
Identities = 20/94 (21%), Positives = 42/94 (44%)
Frame = +2
Query: 8 EQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIAD 187
EQA +K +EQ+ + + ++ + S K + E + ++TKEL
Sbjct: 53 EQARTIK-VLEQRVQTLERELDAAITAAAHARSEKRQAESSQKAAESRAQDVTKELENTT 111
Query: 188 ERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSL 289
+ ++ EL+ E + + I +EA+ ++L
Sbjct: 112 KVFKLHMEELRGMQEQISKRDNEIKLLEAIIQTL 145
>At3g32190.1 68416.m04102 hypothetical protein
Length = 358
Score = 29.5 bits (63), Expect = 0.82
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = +2
Query: 110 KAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSL 289
K K+E +L +++ + EL+ +RY ++Q EL + L E + + +
Sbjct: 94 KQKLEDQLENLSSKLMQSNGELQDQYQRYDKIQEELSNARGRLSESESNAYDLS--NQLS 151
Query: 290 EIEVKNISVRLEEVEANAI 346
+++ K+ S +EV+ + I
Sbjct: 152 KLQAKSASKARKEVKGHGI 170
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 29.5 bits (63), Expect = 0.82
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Frame = +2
Query: 20 RVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAA---DYDEITKELRIADE 190
++K+ +Q E+S +E ++ + K KI++ ++ + + + K L A E
Sbjct: 315 KLKQEFDQAQEKSLQSSSESELLAETNNQLKIKIQELEGLIGSGSVEKETALKRLEEAIE 374
Query: 191 RYQRVQTELKHTVEHL--HEEQ-ERIVKI----EAVKKSLEIEVKNISVRLEEVEA 337
R+ + +TE VE L HE Q E K+ V + ++E+++ +L+ +E+
Sbjct: 375 RFNQKETESSDLVEKLKTHENQIEEYKKLAHEASGVADTRKVELEDALSKLKNLES 430
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 29.5 bits (63), Expect = 0.82
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +2
Query: 29 RSVEQQYEES-QTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRV 205
R V Q+ E T+ L N + + K + + ++ A E IA ++ +++
Sbjct: 154 RKVVQEIERRISTQAEHLRTQNNIFKTREEKYQSRINVLEALASGTGVEHEIATQQLRQI 213
Query: 206 QTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLE 325
+TE E E+E +VK+ +E+ + LE
Sbjct: 214 ETEKSMWEEKKKHEEEDMVKLMKQNDQHNLEISALKQELE 253
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 29.5 bits (63), Expect = 0.82
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Frame = +2
Query: 35 VEQQYEESQTRVNELTVINVNLSSSKAKIE---QELAIVAADYDEITKELRIADERYQRV 205
+++Q E++ + +L + K +E QE+ + DEI LR+ E+
Sbjct: 123 LKKQMEDANLEIADLKMKLATTDEHKEAVESEHQEILKKLKESDEICGNLRVETEKLTSE 182
Query: 206 QTELKHTVEHLHE-EQERIVKIEAVKK---SLEIEVKNISVRLEEV--EANAIVGGK 358
EL +E E E + K+E VKK LE E+ + + E E N + G K
Sbjct: 183 NKELNEKLEVAGETESDLNQKLEDVKKERDGLEAELASKAKDHESTLEEVNRLQGQK 239
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 29.5 bits (63), Expect = 0.82
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +2
Query: 26 KRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRV 205
K+ + E + E+ I ++ + IE+E + EI KE R E Y R+
Sbjct: 471 KQQLLSDKESLEDLQQEIEKIRAEMTKKEEMIEEECKSL-----EIKKEER---EEYLRL 522
Query: 206 QTELKHTVEHLHEEQERIVK-IEAVKKSLEIEVKNISVRLEEVEA 337
Q+ELK +E +E + K +E +K+ E K + L+E +A
Sbjct: 523 QSELKSQIEKSRVHEEFLSKEVENLKQEKERFEKEWEI-LDEKQA 566
>At5g59210.1 68418.m07420 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 434
Score = 29.1 bits (62), Expect = 1.1
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +2
Query: 20 RVKRSVEQQY---EESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADE 190
RV ++ E+QY E++ + EL I + + + + KE+
Sbjct: 144 RVNQAEEEQYRAEEDAASLRAELNSIQQQAMGNSFAGMSPMGVSPDQLPILEKEMANLKL 203
Query: 191 RYQRVQTELKHTVEH-LHEEQERIVKIEAVKKSLEIEVKNISVRLEEV 331
Q+ ++ L+ +H L EEQ R+ + + K+ LE ++ +S R EV
Sbjct: 204 ELQK-ESVLRQQEQHRLAEEQTRVASLMSEKQELEQKISVLSSRASEV 250
>At4g28715.1 68417.m04107 myosin heavy chain, putative similar to
myosin [Arabidopsis thaliana] gi|499047|emb|CAA84066
Length = 639
Score = 29.1 bits (62), Expect = 1.1
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +2
Query: 68 VNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRV---QTELKHTVEHL 238
V +LT N L S + ++Q++ ++E +K I +ER ++ +T + + +
Sbjct: 101 VEKLTSENEKLKSLVSSLDQKIDETEKKFEERSK---INEERLKQAIEAETTIVNLKTAV 157
Query: 239 HEEQERIVKIEAVKKSL 289
HE QE+I+ +E+ K L
Sbjct: 158 HELQEKILDVESENKIL 174
>At3g54170.1 68416.m05988 FKBP12 interacting protein (FIP37)
identical to FKBP12 interacting protein (FIP37)
GI:3859944 from [Arabidopsis thaliana]
Length = 330
Score = 29.1 bits (62), Expect = 1.1
Identities = 22/96 (22%), Positives = 50/96 (52%)
Frame = +2
Query: 47 YEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHT 226
++ ++ +++EL + S A++ + + +E+T ++ ++E +Q +L
Sbjct: 231 HQAAEGKIHELAIKLAMQKSQNAELRSQFEGLYKHMEELTNDVERSNETVIILQEKL--- 287
Query: 227 VEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVE 334
EE+E+ +IE VKK LEI + + + +EV+
Sbjct: 288 -----EEKEK--EIERVKKGLEIVSELVGDKKDEVD 316
>At3g19370.1 68416.m02457 expressed protein
Length = 704
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/98 (16%), Positives = 42/98 (42%)
Frame = +2
Query: 26 KRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRV 205
K+ + ++ EES ++ L L +K K+E E+ + +++ +L I
Sbjct: 483 KQELRKKLEESVEKIRNLEAEMKTLRENKEKVEAEMETEKSMKEDLDTKLNITRANLNET 542
Query: 206 QTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVR 319
Q +L + ++E L+++++++ +
Sbjct: 543 QKKLSSLEVEFDYRKSCCEELEGTCIELQLQLESVETK 580
>At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase family
protein contains Pfam profile PF00383: Cytidine and
deoxycytidylate deaminase zinc-binding region
Length = 1307
Score = 29.1 bits (62), Expect = 1.1
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +2
Query: 23 VKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAI-VAADYDEITKELR-IADERY 196
++ S Q E +TR + ++ +K QE I V ++ E+T + + +ER
Sbjct: 423 IESSQHQLKERLETRYSSEDRVSEMRRRTKYSSSQEEGINVLQNFPEVTNNQQPLVEERI 482
Query: 197 QRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVG 352
+ Q + T EH+ E E I I+ ++ + + +R +EV A + G
Sbjct: 483 SK-QAGTRRTTEHISESSE-IHDIDI--RNTYVSQREDQIRNQEVHAGLVSG 530
>At1g58025.1 68414.m06576 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487; contains
prenyl group binding site (CAAX box) Prosite:PS00294
Length = 769
Score = 29.1 bits (62), Expect = 1.1
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +2
Query: 32 SVEQQYEESQTRVNELTVINVNLSS-SKAKIEQELAIVAADYDEITKE-LRIADERYQRV 205
S Q+ E++ V E + V + +KA +E + + +E E + A E+ V
Sbjct: 419 SKTQRVIENKQEVEEEENVEVESENKTKANVEDKTQSIDRSMEETGDEPVNSAAEKLV-V 477
Query: 206 QTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEE 328
L+ +EE+E+ +++ KK LE+E K ++++E
Sbjct: 478 LASLEGPKSTQNEEEEKEKRLQEQKKRLELERKEWRMKMQE 518
>At1g22770.1 68414.m02845 gigantea protein (GI) identical to gigantea
protein SP:Q9SQI2 from [Arabidopsis thaliana]
Length = 1173
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 378 SSLLMIRLPPTIALASTSSRRTEMFLTSISRDFLTASILTI 256
S+LL RLP TI S S TS+ RD + S + I
Sbjct: 1064 SNLLKCRLPATIRCLSHPSAHVRALSTSVLRDIMNQSSIPI 1104
>At1g13790.1 68414.m01619 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 736
Score = 29.1 bits (62), Expect = 1.1
Identities = 23/105 (21%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Frame = +2
Query: 5 YEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQEL---AIVAADYDEITKEL 175
YE+ + + +E Q +E + R N L + + K++ + + + ++ +++
Sbjct: 423 YEEHEKASQHLEAQRKEYEDRENYLDKCQAKNKTERRKLQWQKHKNLMATQEQNKADEDM 482
Query: 176 RIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNI 310
E+ QR + EL+ V L E KI+A +++LE+E++ +
Sbjct: 483 MRLAEQQQREKDELRKQVRELEE------KIDA-EQALELEIERM 520
>At5g60850.1 68418.m07633 Dof-type zinc finger domain-containing
protein similar to zinc finger protein OBP4 gi:5059396
from [Arabidopsis thaliana]; EMBL:AF155817
Length = 307
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 244 GTGEDRQDRGRQEVS*NRSQEHLCPSGRSRSQRYCWWQAYH 366
G G DR+ R Q N Q CP S + ++C++ Y+
Sbjct: 30 GGGGDRRMRAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYN 70
>At5g41310.1 68418.m05020 kinesin motor protein-related
Length = 961
Score = 28.7 bits (61), Expect = 1.4
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Frame = +2
Query: 23 VKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKEL----RIADE 190
V++ + Q E + + N L + S+ + + LA D +E+ ++ R E
Sbjct: 218 VEQRISNQAENLKNQ-NILFRVREEKYRSRINVLETLASGTTDENEVRRKRCAPNRKGKE 276
Query: 191 RYQRVQTELKHTVE---HLHEEQERIVKIEAVKKSLEIE--VKNISVRLEEVE 334
R ++LK +E HE+Q +K+ A K +E+E VKN +R+ E +
Sbjct: 277 RSNAELSKLKQELEIVKETHEKQFLELKLNAQKAKVELERQVKNSELRVVEAK 329
>At4g27180.1 68417.m03904 kinesin-like protein B (KATB)
Length = 745
Score = 28.7 bits (61), Expect = 1.4
Identities = 25/105 (23%), Positives = 51/105 (48%)
Frame = +2
Query: 11 QALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADE 190
Q L + + EQ+ ++ +NE ++ ++ K K E+EL +V DE+ K
Sbjct: 77 QELELDYAFEQEKLKNAMEMNEKHCADLEVNL-KVK-EEELNMVI---DELRKNFASVQV 131
Query: 191 RYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLE 325
+ + QTE E L +E+E + +E+++ ++ E+ L+
Sbjct: 132 QLAKEQTEKLAANESLGKEREARIAVESLQAAITEELAKTQGELQ 176
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 28.3 bits (60), Expect = 1.9
Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +2
Query: 8 EQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKEL-RIA 184
E+A + + +E + +EL + V +S K +IE + + +D +++ ++L R
Sbjct: 319 EEAKARAEQINELVKEKTVKESELEGLMVENNSIKKEIEMAM-VQFSDKEKLVEQLLREK 377
Query: 185 DERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKN 307
+E QRV + VE E+ + ++K ++KN
Sbjct: 378 NELVQRVVNQEAEIVELSKLAGEQKHAVAQLRKDYNDQIKN 418
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 28.3 bits (60), Expect = 1.9
Identities = 26/124 (20%), Positives = 57/124 (45%)
Frame = +2
Query: 8 EQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIAD 187
+ AL+ + ++ + N+L N L S + ++ ++ Y+EI+K I++
Sbjct: 976 QSALQDMQLEIEELSKGLEMTNDLAAENEQLKESVSSLQNKIDESERKYEEISK---ISE 1032
Query: 188 ERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRII 367
ER +K V + +Q I+K+E + L+ V ++ +++E++ I
Sbjct: 1033 ER-------IKDEVPVI--DQSAIIKLETENQKLKALVSSMEEKIDELDRKHDETSPNIT 1083
Query: 368 SKLE 379
KL+
Sbjct: 1084 EKLK 1087
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 27.9 bits (59), Expect = 2.5
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +2
Query: 161 ITKELRIADERYQRVQTELKHTVEHLHEEQERIVK 265
ITKE R+ + R+Q+ELK ++ + +E+E ++K
Sbjct: 489 ITKEERV---EFLRLQSELKQQIDKVKQEEELLLK 520
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 27.9 bits (59), Expect = 2.5
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 161 ITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLE 325
+ E+RI E QR +L+ E + E QE+I + K L V NI LE
Sbjct: 31 LANEIRILKEESQRTNLDLESVKEKIKENQEKI----KLNKQLPYLVGNIVEILE 81
>At5g59210.2 68418.m07421 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 433
Score = 27.5 bits (58), Expect = 3.3
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +2
Query: 20 RVKRSVEQQY---EESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADE 190
RV ++ E+QY E++ + EL I + + + + KE+
Sbjct: 144 RVNQAEEEQYRAEEDAASLRAELNSIQQQAMGNSFAGMSPMGVSPDQLPILEKEMANLKL 203
Query: 191 RYQRVQTELKHTVEH-LHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRII 367
Q+ ++ L+ +H L EEQ R+ + + K+ LE ++ +S R E+ V
Sbjct: 204 ELQK-ESVLRQQEQHRLAEEQTRVASLMSEKQELEQKISVLSSRASVSESGQKVFSVEDK 262
Query: 368 SKLE 379
KLE
Sbjct: 263 EKLE 266
>At3g61570.1 68416.m06896 intracellular protein transport protein
USO1-related contains weak similarity to intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]
Length = 712
Score = 27.5 bits (58), Expect = 3.3
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Frame = +2
Query: 107 SKAKIEQELAIVAADYDEITKELRIADERYQR-------VQTELKHTVEHLHEEQERIVK 265
+K E+ELA+ + +++ L+ +DER + V ++L H + E + R+ K
Sbjct: 477 AKEHFERELAMAKDELMKLSARLKDSDERLESSNKEKEDVTSKLLHAEKVAAEWKNRVTK 536
Query: 266 IEAVKKSLEIEVKNISVRLE--EVEANAIVGGKRIISKL 376
+E + ++ RL +E++ +V +RI+ KL
Sbjct: 537 VEEDNAKVRRVLEQSMTRLNRMSMESDYLV-DRRIVIKL 574
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 27.5 bits (58), Expect = 3.3
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 137 IVAADYDEITKELRIADERYQRVQTELKHTVEHLHEE-QERIVKIEAVKKSLEIEVKNIS 313
I+ Y E+T+ ++ E T+ L ++ Q+ + + L E KN S
Sbjct: 1247 IIVNRYSEVTESHTFELKQKDFQVAESTGTILSLKQQVQDLEATCKEFRSKLLEEEKNAS 1306
Query: 314 V---RLEEVEANAIVGGKRIISKLEGG 385
+LEE+E +I K +S+L+GG
Sbjct: 1307 AMEQKLEEIEETSISAMKEKLSELKGG 1333
>At2g37630.1 68415.m04616 myb family transcription factor (MYB91)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 367
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 191 RYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKR 361
R +R++ +L+ E ++E++ +IEA K+L E KN ++E +VG +R
Sbjct: 278 RLRRLELQLES--EKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRR 332
>At2g06005.2 68415.m00656 expressed protein
Length = 342
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +2
Query: 92 VNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIE 271
V+L+ A +QEL ++A+ +++ ELR+A E++ ++ E ++
Sbjct: 235 VDLAHLLAARDQELRTLSAEMNQLQSELRLARSLIAERDAEVQRVNSTNNQYIEENERLR 294
Query: 272 AVKKSLEIEVKNISVRLE 325
A+ + N+ LE
Sbjct: 295 AILSEWSMRAANLERALE 312
>At2g06005.1 68415.m00655 expressed protein
Length = 355
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +2
Query: 92 VNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIE 271
V+L+ A +QEL ++A+ +++ ELR+A E++ ++ E ++
Sbjct: 248 VDLAHLLAARDQELRTLSAEMNQLQSELRLARSLIAERDAEVQRVNSTNNQYIEENERLR 307
Query: 272 AVKKSLEIEVKNISVRLE 325
A+ + N+ LE
Sbjct: 308 AILSEWSMRAANLERALE 325
>At1g22260.1 68414.m02782 expressed protein
Length = 857
Score = 27.5 bits (58), Expect = 3.3
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 155 DEITKELRIADERYQRV-QTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEV 331
D+ +EL++ ++ + QTE T + ++ I K+EA ++ ++N++ +LE+V
Sbjct: 178 DKELEELKLEKQQKEMFYQTERCGTASLIEKKDAVITKLEASAAERKLNIENLNSQLEKV 237
>At1g22060.1 68414.m02759 expressed protein
Length = 1999
Score = 27.5 bits (58), Expect = 3.3
Identities = 11/54 (20%), Positives = 28/54 (51%)
Frame = +2
Query: 149 DYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNI 310
D + + +E+ RY ++TEL+ + + + ++E ++ L + +KN+
Sbjct: 1926 DINNLIEEMLDTKGRYSSMETELREMHDRYSQLSLKFAEVEGERQKLMMTLKNV 1979
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 194 YQRVQTELKHTVEHLHEEQERIVKIEAV--KKSLEIEVKNISVRLEEVEANAIV 349
+ + E+ H+V EEQE I ++EA+ +++ IE R EE+ AN ++
Sbjct: 307 FDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLL 360
>At5g66810.1 68418.m08423 expressed protein similar to unknown
protein (gb|AAB71479.1|)
Length = 750
Score = 27.1 bits (57), Expect = 4.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 135 LSSPPTTMRSPRNSASPMRDTSAY 206
++SPP+ + SP +S+SP +S+Y
Sbjct: 88 VNSPPSPLSSPSSSSSPSISSSSY 111
>At5g32590.1 68418.m03867 myosin heavy chain-related similar to
Myosin heavy chain, non-muscle (Zipper protein) (Myosin
II)(SP:Q99323) {Drosophila melanogaster}
Length = 761
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/71 (18%), Positives = 36/71 (50%)
Frame = +2
Query: 101 SSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVK 280
+ ++ K+E +L ++++ + EL+ +RY ++Q EL + L E + +
Sbjct: 500 NDARQKLEDQLDNLSSELMKSNGELQDQYQRYDKIQEELSTARDTLSESESSAYDLSNQL 559
Query: 281 KSLEIEVKNIS 313
L+++ + ++
Sbjct: 560 SELQLKYQAVA 570
>At5g07660.1 68418.m00877 structural maintenance of chromosomes (SMC)
family protein similar to SMC-like protein (MIM)
[Arabidopsis thaliana] GI:5880614; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain
Length = 1058
Score = 27.1 bits (57), Expect = 4.4
Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +2
Query: 59 QTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHL 238
Q + E + L S + E + + A Y+ + + + E ++ + ELK + L
Sbjct: 727 QKEIEEKESLLEKLQDSLKEAELKANELKASYENLYESAKGEIEALEKAEDELKEKEDEL 786
Query: 239 HE-EQERIVKIEAVKKSLEIEVKNISVRLEEVE 334
H E E+ + +K + E+K +E+E
Sbjct: 787 HSAETEKNHYEDIMKDKVLPEIKQAETIYKELE 819
>At3g47660.1 68416.m05188 regulator of chromosome condensation
(RCC1) family protein contains Pfam domain PF00415:
Regulator of chromosome condensation (RCC1)
Length = 951
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 138 SSPPTTMRS-PRNSASPMRDTSAYRLS 215
+SPP T+ + P N +SP DTS Y +S
Sbjct: 208 TSPPETIENRPTNHSSPGVDTSKYSIS 234
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 27.1 bits (57), Expect = 4.4
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Frame = +2
Query: 107 SKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKH-TVEHLHEE------QERIVK 265
+K E+ELA+ D +++ L+ DE+ + + E + T + LH E + R+ K
Sbjct: 482 AKEHFERELAVAKEDAMKLSARLKDVDEQLESSKKEKEEITSKVLHAENIAAEWKNRVSK 541
Query: 266 IEAVKKSLEIEVKNISVRLEEVEANA-IVGGKRIISKL 376
+E + ++ RL + ++ + +RI+ KL
Sbjct: 542 VEDDNAKVRRVLEQSMTRLNRMSMDSDFLVDRRIVIKL 579
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 27.1 bits (57), Expect = 4.4
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +2
Query: 149 DYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLE 325
+Y KEL A E+ ++V+ E + +R+ K + KSL+ +K ++ L+
Sbjct: 224 EYTIYDKELHDAREKLEQVEVARTKASEESTKMYDRVEKAQDDSKSLDESLKELTKELQ 282
>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
microtubule-associated motor KIF4 , Mus musculus,
PIR:A54803
Length = 1294
Score = 26.6 bits (56), Expect = 5.8
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +2
Query: 242 EEQERIVKIEAVKKSLEIEVKNISVRLEEVEA 337
E QE+ ++ ++++ L++E+K + RLEE EA
Sbjct: 539 EFQEKEIEHCSLQEKLDMELKELDKRLEEKEA 570
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 26.6 bits (56), Expect = 5.8
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 116 KIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKK---- 283
K+E +L ++ ++TKE + ++Q + + L +E++++ +I+A+ K
Sbjct: 355 KLEDKLEKDSSKIGDMTKESEDSSNLIPKLQENIPKLQKVLLDEEKKLEEIKAIAKVETE 414
Query: 284 SLEIEVKNISVRLEEVEANAIV 349
E+ I LE E + IV
Sbjct: 415 GYRSELTKIRAELEPWEKDLIV 436
>At5g39790.1 68418.m04820 5'-AMP-activated protein kinase beta-1
subunit-related contains similarity to Swiss-Prot:P80387
5'-AMP-activated protein kinase, beta-1 subunit (AMPK
beta-1 chain) (AMPKb) (40 kDa subunit) [Sus scrofa]
Length = 273
Score = 26.6 bits (56), Expect = 5.8
Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Frame = +2
Query: 32 SVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQ- 208
S + Y+ S L + SS + E DE+ K L I ER + V+
Sbjct: 46 STRKHYKNSLLLKRFLVGVGTEESSLSEDLLDESLSRPLTSDEL-KSLLIDTERSKLVKK 104
Query: 209 -TELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRIIS 370
+E L ++ I I+ +E+EV+ + EE+ I G R IS
Sbjct: 105 LSEANQQNRFLKRQEHEITNIKTELALMELEVQALVKLAEEIANLGIPQGSRKIS 159
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 26.6 bits (56), Expect = 5.8
Identities = 21/125 (16%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Frame = +2
Query: 8 EQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIE-QELAIVAADYDEITKELRIA 184
E++ ++ E+ Q V++ + L S K K+E + + T+ ++++
Sbjct: 160 EESAKLNAIQERTMRHIQKIVDDHERLTKLLESEKKKLEIKGNELAKPQVHNGTERMKLS 219
Query: 185 DERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRI 364
++ QR + EL + L + +++ +++E+EV+ + +L ++ A G ++
Sbjct: 220 EDLEQRQKEELHEKIIRLERQIDQV-------QAIELEVEQLKGQLNVMKHMASDGDAQV 272
Query: 365 ISKLE 379
+ +++
Sbjct: 273 VKEVD 277
>At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family protein
/ kinesin motor family protein kinesin, Syncephalastrum
racemosum, AJ225894
Length = 941
Score = 26.6 bits (56), Expect = 5.8
Identities = 25/128 (19%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Frame = +2
Query: 8 EQALRVKRSVEQQYEESQTR--VNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRI 181
+Q ++KR + + SQ NEL + LS EL V DYD++ ++
Sbjct: 656 DQLRQMKRLISDRQVISQENEEANELKIKLEELSQMYESTVDELQTVKLDYDDLLQQKEK 715
Query: 182 ADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKR 361
E + ++ L + + + + K++ + E V+ E++ + G +
Sbjct: 716 LGEEVRDMKERLLLEEKQRKQMESELSKLKKNLRESENVVEEKRYMKEDLSKGSAESGAQ 775
Query: 362 IISKLEGG 385
S+ G
Sbjct: 776 TGSQRSQG 783
>At3g23980.1 68416.m03012 dentin sialophosphoprotein-related
contains weak similarity to Dentin sialophosphoprotein
precursor (Swiss-Prot:Q9NZW4) [Homo sapiens]
Length = 736
Score = 26.6 bits (56), Expect = 5.8
Identities = 22/101 (21%), Positives = 41/101 (40%)
Frame = +2
Query: 32 SVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQT 211
S+ Y + + VN+L L EL V +Y E ADER Q + +
Sbjct: 396 SMTDTYNQQRGLVNQLKDDMERLYQQIQAQMGELESVRVEYANAQLECNAADERSQILAS 455
Query: 212 ELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVE 334
E+ + + +K+E + + E+ + +L+ +E
Sbjct: 456 EVISLEDKALRLRSNELKLERELEKAQTEMLSYKKKLQSLE 496
>At2g47230.1 68415.m05898 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 701
Score = 26.6 bits (56), Expect = 5.8
Identities = 23/81 (28%), Positives = 42/81 (51%)
Frame = +2
Query: 95 NLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEA 274
+LS S A++E+ VAA I K L + DER ++ + E K + + E I
Sbjct: 584 SLSCSFAELEKHGFDVAAPQSRINKMLSLQDERAKKAE-ERKGLEKKI--EAGEIEGHTY 640
Query: 275 VKKSLEIEVKNISVRLEEVEA 337
++ E+E+K + ++ ++V A
Sbjct: 641 EEEMAELELKILELKRQQVVA 661
>At1g80810.1 68414.m09481 expressed protein similar to
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]; similar
to bimD (GI:168025) [Emericella nidulans]
Length = 826
Score = 26.6 bits (56), Expect = 5.8
Identities = 14/77 (18%), Positives = 38/77 (49%)
Frame = +2
Query: 155 DEITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVE 334
D ++EL + +ER++ ++ + + + E I + +++ + KN++V +E
Sbjct: 594 DGDSEELNLTEERWELLEDDTSADEDKEIDLPESIPLSDIMQRQKVKKSKNVAVSVEPTS 653
Query: 335 ANAIVGGKRIISKLEGG 385
++ + R + K + G
Sbjct: 654 SSGVRSSSRTLMKKDCG 670
>At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 26.6 bits (56), Expect = 5.8
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +2
Query: 32 SVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQT 211
S E++YE+ R +++ + + K K+E+EL + + +E+ E + R+Q
Sbjct: 263 SSEKEYEQISRRTDDIKLELDDERREKKKLEEELMELNKELEELGSE--SVEAAIVRLQE 320
Query: 212 ELKH 223
E+K+
Sbjct: 321 EVKN 324
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 26.6 bits (56), Expect = 5.8
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +2
Query: 11 QALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKI-EQELAIVAADYDEITKELRIAD 187
Q+L R +E + EL V+ S + KI QELA V + + K+L ++
Sbjct: 657 QSLLYVRDLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKDLERSE 716
Query: 188 ERYQRVQTELKHTVEH---LHEEQERIVKIEAVKKSLEIE 298
E+ ++ +L ++ L +++E+ K + +K EIE
Sbjct: 717 EKSALLRDKLSMAIKKGKGLVQDREKF-KTQLDEKKSEIE 755
>At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3
subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to
eukaryotic translation initiation factor 3 subunit 10
(eIF-3 theta) (Eukaryotic translation initiation factor
3 large subunit) (eIF3a) (p114). [Arabidopsis thaliana]
SWISS-PROT:Q9LD55
Length = 987
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 173 LRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKS 286
L+I +ER +++Q E + + EE ER+ K+EA +K+
Sbjct: 797 LKIEEERIRKLQEEEEARKQ---EEAERLKKVEAERKA 831
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 227 VEHLHEEQERIVKIEAVKKSLEIEVKNISV 316
VEH HEE ERI ++A +K + NI++
Sbjct: 163 VEHDHEEDERISSLKA-RKRRKTSANNINL 191
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 7.6
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Frame = +2
Query: 8 EQALRVKRSVEQQYEESQTRVNELTVINVNLS---SSKAKI--EQELAIVAADYD-EITK 169
E L R E++ E++ R EL +L S +AK+ +E A+ + + K
Sbjct: 229 ENVLEKLRRAEEKRVEAEARAKELEKQVASLGEGVSLEAKLLSRKEAALRQREAALNVAK 288
Query: 170 ELRIA-DERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVE 334
+ + DE +++EL++ + ER+ + E+ KSL + + + +E+E
Sbjct: 289 QKKSGKDEEIVSLRSELENLKDEATTAAERLQEAESEAKSLRTMTQRMILTQDEME 344
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 7.6
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Frame = +2
Query: 8 EQALRVKRSVEQQYEESQTRVNELTVINVNLS---SSKAKI--EQELAIVAADYD-EITK 169
E L R E++ E++ R EL +L S +AK+ +E A+ + + K
Sbjct: 229 ENVLEKLRRAEEKRVEAEARAKELEKQVASLGEGVSLEAKLLSRKEAALRQREAALNVAK 288
Query: 170 ELRIA-DERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVE 334
+ + DE +++EL++ + ER+ + E+ KSL + + + +E+E
Sbjct: 289 QKKSGKDEEIVSLRSELENLKDEATTAAERLQEAESEAKSLRTMTQRMILTQDEME 344
>At1g28410.1 68414.m03493 expressed protein
Length = 301
Score = 26.2 bits (55), Expect = 7.6
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = +2
Query: 35 VEQQYEESQTRVNELTVINVNLSSSKAKIE---QELAIVAADYDEITKELRIADERYQRV 205
V+QQ +Q +N+L + +S +A +E Q+L E K +++A+ + +
Sbjct: 22 VQQQIGSNQNLINDLDSAKLRISQLEAVLEATIQKLDGKTLYLKEREKLIQVAETQILDL 81
Query: 206 QTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANA 343
Q+ L Q+RI ++E K L ++ + L +E A
Sbjct: 82 QSASYIDKSGLPLVQKRISELEEEVKLLWAALRTTNFELHVLEDKA 127
>At1g26300.2 68414.m03207 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 213
Score = 26.2 bits (55), Expect = 7.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 20 RVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAA 148
R K E+ ++SQT + VNL + AK +ELA+ A+
Sbjct: 7 RAKSFAEEAGKKSQTITQSSSATFVNLVTETAKKSKELALEAS 49
>At1g26300.1 68414.m03206 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 316
Score = 26.2 bits (55), Expect = 7.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 20 RVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAA 148
R K E+ ++SQT + VNL + AK +ELA+ A+
Sbjct: 7 RAKSFAEEAGKKSQTITQSSSATFVNLVTETAKKSKELALEAS 49
>At1g12840.1 68414.m01491 vacuolar ATP synthase subunit C (VATC) /
V-ATPase C subunit / vacuolar proton pump C subunit
(DET3) identical to vacuolar ATP synthase subunit C
SP:Q9SDS7 from [Arabidopsis thaliana]
Length = 375
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 95 NLSSSKAKIEQELAIVAADYDEITKELRIADER 193
N+ S AKIE +L + A+Y+ I +L + +
Sbjct: 124 NIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRK 156
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,220,509
Number of Sequences: 28952
Number of extensions: 90868
Number of successful extensions: 646
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 547638520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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