Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31860
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24CE3 Cluster: Putative uncharacterized protein; n=1; ...    33   3.9  
UniRef50_A3MTE9 Cluster: Putative uncharacterized protein; n=1; ...    32   6.8  
UniRef50_Q484I1 Cluster: Signal peptidase I; n=1; Colwellia psyc...    32   8.9  
UniRef50_Q6LFH6 Cluster: Putative uncharacterized protein; n=1; ...    32   8.9  

>UniRef50_Q24CE3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 707

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 21/74 (28%), Positives = 38/74 (51%)
 Frame = +2

Query: 224 NTTSDHRKGS*YTMSAKNIPGDKVLQSSQRYIFKGKIVAKHGQTH*IKIKVRKSPLNWNY 403
           N  S+ +    ++ + KNI  D+++Q+ Q  I   +I   +   + IKI+ +K  LN N 
Sbjct: 371 NQVSEDQLKQMFSQNYKNIDFDQIIQAKQNNIDHSRIQFHYFAQNMIKIQKQKQNLNKNT 430

Query: 404 ILIADFYWNIWNSK 445
             + ++   IWN K
Sbjct: 431 QNVLNY--QIWNRK 442


>UniRef50_A3MTE9 Cluster: Putative uncharacterized protein; n=1;
           Pyrobaculum calidifontis JCM 11548|Rep: Putative
           uncharacterized protein - Pyrobaculum calidifontis
           (strain JCM 11548 / VA1)
          Length = 707

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 19/81 (23%), Positives = 40/81 (49%)
 Frame = -3

Query: 505 IDFYITLLIRMKDNAYVFHDF*IPYIPVKICYKNVVPIKWTLAYFNFDLVCLSVFCNNFT 326
           I  +I LL+      Y+F  F + +IP  + Y+N +   +T   +++  V + +  N+ +
Sbjct: 390 IRLFIYLLVMPILLFYLFPFFTLNFIPESLTYENTIITPFTQVIYDYSRV-IEILKNDNS 448

Query: 325 FEYITLRTLQYLISGYIFCRH 263
           F +   R L Y  +  ++C +
Sbjct: 449 FNHSIDRILVYPFTNTLWCEN 469


>UniRef50_Q484I1 Cluster: Signal peptidase I; n=1; Colwellia
           psychrerythraea 34H|Rep: Signal peptidase I - Colwellia
           psychrerythraea (strain 34H / ATCC BAA-681)
           (Vibriopsychroerythus)
          Length = 253

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 26/85 (30%), Positives = 36/85 (42%)
 Frame = +2

Query: 245 KGS*YTMSAKNIPGDKVLQSSQRYIFKGKIVAKHGQTH*IKIKVRKSPLNWNYILIADFY 424
           KGS +      IPGD V      +   G I+     T  + IK ++ P +  Y   A   
Sbjct: 94  KGSLFVKRVMAIPGDTVQIIDNNFYINGSILPLKATTMDV-IKNKELPYSSKYSFSAYQE 152

Query: 425 WNIWNSKIMKHVCIIFHSDEQSYIK 499
            N  ++   K+  IIF SD   YIK
Sbjct: 153 TNNISASKTKNYNIIFTSDLPDYIK 177


>UniRef50_Q6LFH6 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 6077

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
 Frame = -3

Query: 421  KICYKNVVPIKWTLAYF--NFDLVCLSVFCNNF---TFEYITLR-TLQYLISGYIFCRHC 260
            K CY+NV+ +K+ ++ F  N D +  S+F +NF    ++ I  + T   LI   IF    
Sbjct: 839  KNCYENVIILKYMVSLFSNNKDEIFASIFEDNFFKVAYDVILKKITSATLIGTLIFHLFH 898

Query: 259  VSASFSVIRRRVAHDL 212
            ++ SFS I+     DL
Sbjct: 899  MTFSFSFIKNYKTTDL 914


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,283,588
Number of Sequences: 1657284
Number of extensions: 10198908
Number of successful extensions: 25415
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25413
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)