Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31860
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    25   0.53 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    25   0.53 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.1  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   2.1  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   2.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   4.9  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   4.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   4.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.6  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 24.6 bits (51), Expect = 0.53
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 416 DFYWNIWNSKIMKHVC 463
           D +WN WN +  ++ C
Sbjct: 109 DVFWNCWNGEASRYQC 124


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 24.6 bits (51), Expect = 0.53
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 416 DFYWNIWNSKIMKHVC 463
           D +WN WN +  ++ C
Sbjct: 109 DVFWNCWNGEASRYQC 124


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +2

Query: 422 YWNIWNSKIMKHVCI 466
           YW  WN    + +CI
Sbjct: 115 YWTCWNGTATEQLCI 129


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 201 GSHCNRESPAYDINTSLYQITWPSSQLERYIRSTNTI 91
           GS+    + A   NTSLY  T+  S+   Y R+   I
Sbjct: 263 GSYGRGFALADPTNTSLYAATYGGSEAGPYTRAMGVI 299


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 201 GSHCNRESPAYDINTSLYQITWPSSQLERYIRSTNTI 91
           GS+    + A   NTSLY  T+  S+   Y R+   I
Sbjct: 263 GSYGRGFALADPTNTSLYAATYGGSEAGPYTRAMGVI 299


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 413 ADFYWNIWNSKIMKHVCIIFHSDEQSY 493
           + FYWN+    +   VC    SD Q +
Sbjct: 918 SSFYWNLLPIAVFILVCATCSSDIQLF 944


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 413 ADFYWNIWNSKIMKHVCIIFHSDEQSY 493
           + FYWN+    +   VC    SD Q +
Sbjct: 918 SSFYWNLLPIAVFILVCATCSSDIQLF 944


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 89  LIVFVLLIYLSSCDD 133
           L VFV+L+Y +S D+
Sbjct: 330 LSVFVILVYYASLDE 344


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +3

Query: 285 EIRYCKVLNVIYSKVKLL 338
           E++YC  LN++  + +LL
Sbjct: 195 ELQYCHYLNILRVRYQLL 212


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +3

Query: 285 EIRYCKVLNVIYSKVKLL 338
           E++YC  LN++  + +LL
Sbjct: 195 ELQYCHYLNILRVRYQLL 212


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 196 RSFLWINRVQHDVGS 240
           RSF  +N+ Q D+G+
Sbjct: 765 RSFELVNKTQFDIGA 779


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,431
Number of Sequences: 336
Number of extensions: 2742
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)