Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31860
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    25   2.0  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   2.6  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   6.1  

>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 352 LSVFCNNFTFEYITLRTLQYLISGYIFCR 266
           +++FC  FTF  I+L  LQY   G   CR
Sbjct: 185 MTLFCVPFTF--ISLFVLQYWPFGLAMCR 211


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 178 ALTVAVRSFLWINRVQHDVGSQ 243
           AL  A R  LW+ ++  DVG +
Sbjct: 834 ALAEACRELLWLQKLMKDVGEK 855


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 303  VLNVIYSKVKLLQNTDRHTKSKLKYARVHLIG 398
            V  +  SK K+     +HT ++L+    HL+G
Sbjct: 1072 VSRLFVSKSKVTPLATKHTIARLELCAAHLLG 1103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,797
Number of Sequences: 2352
Number of extensions: 11748
Number of successful extensions: 61
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)