Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31860
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002472-1|AAH02472.2|  544|Homo sapiens acyltransferase like 1 ...    29   9.7  
AY165856-1|AAN85606.1|  121|Homo sapiens immunoglobulin heavy ch...    29   9.7  
AK000488-1|BAA91199.1|  427|Homo sapiens protein ( Homo sapiens ...    29   9.7  
AB244718-1|BAF47696.1|  544|Homo sapiens lyso-PAF acetyltransfer...    29   9.7  

>BC002472-1|AAH02472.2|  544|Homo sapiens acyltransferase like 1
           protein.
          Length = 544

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -3

Query: 439 IPYIPVKICYKNVVP-IKWTLAYFNFDLVCLSVFCNNFT 326
           +P  PV + Y N +  + WT   + F  +C+  FC  FT
Sbjct: 241 VPVQPVLLRYPNKLDTVTWTWQGYTFIQLCMLTFCQLFT 279


>AY165856-1|AAN85606.1|  121|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 121

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +1

Query: 157 SVYVVCWALTVAVRSFLWINRVQHDVGSQKRKLIHNVGKKYTRR*GTAKFSTLYIQ 324
           SVY + W   V  +  +W++R+  D G+       +V  ++T     AK +TLY+Q
Sbjct: 30  SVYWMHWVRQVPGKGLMWVSRINSDGGT--TNYAESVKGRFTISRDNAK-NTLYLQ 82


>AK000488-1|BAA91199.1|  427|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20481 fis, clone KAT07534. ).
          Length = 427

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -3

Query: 439 IPYIPVKICYKNVVP-IKWTLAYFNFDLVCLSVFCNNFT 326
           +P  PV + Y N +  + WT   + F  +C+  FC  FT
Sbjct: 124 VPVQPVLLRYPNKLDTVTWTWQGYTFIQLCMLTFCQLFT 162


>AB244718-1|BAF47696.1|  544|Homo sapiens lyso-PAF
           acetyltransferase:LPC acyltransferase 1 protein.
          Length = 544

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -3

Query: 439 IPYIPVKICYKNVVP-IKWTLAYFNFDLVCLSVFCNNFT 326
           +P  PV + Y N +  + WT   + F  +C+  FC  FT
Sbjct: 241 VPVQPVLLRYPNKLDTVTWTWQGYTFIQLCMLTFCQLFT 279


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,226,048
Number of Sequences: 237096
Number of extensions: 1523295
Number of successful extensions: 2728
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2728
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)