Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31859
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   3.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   3.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   5.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   5.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   5.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   7.5  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           21   7.5  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           21   7.5  
M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee homeobox-...    21   10.0 

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 308 SYPVTSVLFNDTAEKILSSGVD 373
           +YP   VLF  + E I  +G+D
Sbjct: 176 TYPFNPVLFISSLENISLNGID 197


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 308 SYPVTSVLFNDTAEKILSSGVD 373
           +YP   VLF  + E I  +G+D
Sbjct: 214 TYPFNPVLFISSLENISLNGID 235


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +2

Query: 275 RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 409
           ++ N V     SY   S  FN+     + S   ++ K+ D+RN +
Sbjct: 450 KEYNTVPIIAESYGSGSTNFNERPAVAVVSKSSSINKLEDLRNKK 494


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +2

Query: 275 RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 409
           ++ N V     SY   S  FN+     + S   ++ K+ D+RN +
Sbjct: 450 KEYNTVPIIAESYGSGSTNFNERPAVAVVSKSSSINKLEDLRNKK 494


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +2

Query: 275 RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 409
           ++ N V     SY   S  FN+     + S   ++ K+ D+RN +
Sbjct: 450 KEYNTVPIIAESYGSGSTNFNERPAVAVVSKSSSINKLEDLRNKK 494


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 237 ETKSSGPLLAPETEFT 190
           +T + GPLLAP  ++T
Sbjct: 94  KTGNGGPLLAPYPDWT 109


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 406 SDFPENKRTYRHCYRIIIVM 465
           ++ P NKR   HC  +I  +
Sbjct: 74  NELPANKRFQAHCAGVITAL 93


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 406 SDFPENKRTYRHCYRIIIVM 465
           ++ P NKR   HC  +I  +
Sbjct: 74  NELPANKRFQAHCAGVITAL 93


>M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E30. ).
          Length = 109

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 110 GATDNTVAVWDVPTGTRIKKLKGHAN 187
           G T+  + +W      +IKK  G  N
Sbjct: 58  GLTEAQIKIWFQNKRAKIKKASGQKN 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,763
Number of Sequences: 438
Number of extensions: 3060
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)