Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31859
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 200 4e-52
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 91 4e-19
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 90 7e-19
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 90 7e-19
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 86 2e-17
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 85 3e-17
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 83 1e-16
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 80 8e-16
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 78 3e-15
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 77 7e-15
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 77 7e-15
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 77 7e-15
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 76 1e-14
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 75 2e-14
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 74 5e-14
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 74 7e-14
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 73 9e-14
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 73 1e-13
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 73 1e-13
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 72 3e-13
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 72 3e-13
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 71 5e-13
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 71 5e-13
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 70 1e-12
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 70 1e-12
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 69 1e-12
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 69 2e-12
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 69 2e-12
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 69 2e-12
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 69 2e-12
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 69 2e-12
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 69 2e-12
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 69 2e-12
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 68 3e-12
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 68 3e-12
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 67 6e-12
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 66 1e-11
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 66 1e-11
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 66 1e-11
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 66 1e-11
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 66 2e-11
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 66 2e-11
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 65 2e-11
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 65 2e-11
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 65 3e-11
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 65 3e-11
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 65 3e-11
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 64 4e-11
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 64 5e-11
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 64 5e-11
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 64 7e-11
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 64 7e-11
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 64 7e-11
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 64 7e-11
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 63 1e-10
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 62 2e-10
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 62 2e-10
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 62 2e-10
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 62 3e-10
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 61 4e-10
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 61 5e-10
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 60 7e-10
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 60 7e-10
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 60 9e-10
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 60 9e-10
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 60 1e-09
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 59 2e-09
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 59 2e-09
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 59 2e-09
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 58 3e-09
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 58 3e-09
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 58 3e-09
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 58 4e-09
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 41 4e-09
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 58 5e-09
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 58 5e-09
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 58 5e-09
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 58 5e-09
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 58 5e-09
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 58 5e-09
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 56 1e-08
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 56 1e-08
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 56 1e-08
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 56 1e-08
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 56 2e-08
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 56 2e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 56 2e-08
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 55 2e-08
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 55 2e-08
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 55 2e-08
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 55 3e-08
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 55 3e-08
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 55 3e-08
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 55 3e-08
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 54 4e-08
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 54 4e-08
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 54 4e-08
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 54 6e-08
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 54 8e-08
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 53 1e-07
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 53 1e-07
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 53 1e-07
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 52 2e-07
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 52 2e-07
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 52 2e-07
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 52 2e-07
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 52 2e-07
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 52 2e-07
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 52 2e-07
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 52 3e-07
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 52 3e-07
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 52 3e-07
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 51 4e-07
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 51 4e-07
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 51 4e-07
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 51 4e-07
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 51 5e-07
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 51 5e-07
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 50 7e-07
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 50 9e-07
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 50 9e-07
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 50 9e-07
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 50 9e-07
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 50 9e-07
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 50 9e-07
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 50 9e-07
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 50 1e-06
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 50 1e-06
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 49 2e-06
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 49 2e-06
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 49 2e-06
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 49 2e-06
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 48 3e-06
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 48 3e-06
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 48 3e-06
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 48 3e-06
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 48 4e-06
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 48 5e-06
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 48 5e-06
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 48 5e-06
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 48 5e-06
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 47 7e-06
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 47 7e-06
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 47 7e-06
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 47 7e-06
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 47 9e-06
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 46 1e-05
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 46 2e-05
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 46 2e-05
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 46 2e-05
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 46 2e-05
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 46 2e-05
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 46 2e-05
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 46 2e-05
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 46 2e-05
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 46 2e-05
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 46 2e-05
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 45 3e-05
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 45 3e-05
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 45 3e-05
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 45 3e-05
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 45 3e-05
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 44 5e-05
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 44 5e-05
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 44 5e-05
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 44 6e-05
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 44 6e-05
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 44 8e-05
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 43 1e-04
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 43 1e-04
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 43 1e-04
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 42 2e-04
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 42 2e-04
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 42 2e-04
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 42 2e-04
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 41 4e-04
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 41 4e-04
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 40 8e-04
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 40 8e-04
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 40 8e-04
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 40 8e-04
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 40 0.001
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 40 0.001
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 40 0.001
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 40 0.001
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 40 0.001
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 40 0.001
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 39 0.002
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 39 0.002
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 39 0.002
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 39 0.002
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 39 0.002
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 39 0.002
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 38 0.003
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 38 0.003
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 38 0.003
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 38 0.003
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 38 0.003
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 38 0.004
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 38 0.004
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 38 0.004
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 38 0.004
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 38 0.005
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 37 0.007
At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat fam... 37 0.007
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 37 0.007
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 37 0.007
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 37 0.009
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 36 0.012
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 36 0.012
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 36 0.016
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 36 0.016
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 36 0.016
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 36 0.016
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 36 0.021
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 36 0.021
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 35 0.037
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 34 0.049
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 34 0.065
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 34 0.065
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 34 0.065
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 34 0.065
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 33 0.086
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 33 0.086
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 33 0.086
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 33 0.086
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 33 0.11
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 32 0.20
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 32 0.20
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.20
At5g51660.1 68418.m06405 cleavage and polyadenylation specificit... 31 0.35
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 31 0.61
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 31 0.61
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 30 0.80
At2g32160.2 68415.m03931 expressed protein 30 1.1
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 29 1.4
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 29 1.9
At1g03380.1 68414.m00317 expressed protein 29 1.9
At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repe... 29 2.5
At3g56970.1 68416.m06340 basic helix-loop-helix (bHLH) family pr... 28 3.2
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 28 3.2
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 28 4.3
At5g05570.1 68418.m00605 transducin family protein / WD-40 repea... 28 4.3
At4g33440.1 68417.m04751 glycoside hydrolase family 28 protein /... 28 4.3
At3g17150.1 68416.m02188 invertase/pectin methylesterase inhibit... 28 4.3
At3g52910.1 68416.m05831 expressed protein nearly identical to t... 27 5.7
At5g41330.1 68418.m05023 potassium channel tetramerisation domai... 27 7.5
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 27 7.5
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 27 7.5
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 27 7.5
At5g05150.1 68418.m00547 transport protein-related contains 2 WD... 27 7.5
At5g28350.2 68418.m03443 expressed protein 27 9.9
At5g28350.1 68418.m03442 expressed protein 27 9.9
At3g61480.1 68416.m06885 expressed protein 27 9.9
At3g45070.1 68416.m04858 sulfotransferase family protein similar... 27 9.9
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 27 9.9
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 200 bits (488), Expect = 4e-52
Identities = 84/168 (50%), Positives = 120/168 (71%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W V+G C+N MV+KGH AI+ L ++ DGS + + + D TV WDV TG +IKK+ H+
Sbjct: 79 LWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHS 138
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 364
+FVNS RRGP L++S SDD T KLWD R+R + +F Y +T+V F+D A+KI +
Sbjct: 139 SFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTG 198
Query: 365 GVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
GVDN +K+WD+R + ++ ++GH DT+TG+SLS DG+YLL+N MDN L
Sbjct: 199 GVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKL 246
Score = 61.7 bits (143), Expect = 3e-10
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVSGA 211
+M++ GH A+ + F+P G+ + +G+ D + +W V + LKGH N + +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIK 385
G + +VSAS D T++ WD + SS+ + I+S D K
Sbjct: 106 SDGSQ-IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAK 164
Query: 386 MWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+WD+R +++ +T +S S + + +DN +++
Sbjct: 165 LWDMRQRG-AIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKV 206
Score = 57.6 bits (133), Expect = 5e-09
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 244
I + FS ++TG DN V VWD+ G L+GH + + +S + G LL +
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 245 DDNTIKLWDARKRNP----VASFDSSYP-----VTSVLFNDTAEKILSSGVDNVIKMWDI 397
D N + +WD R P V F+ + ++ K+ + D ++ +WD
Sbjct: 243 D-NKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT 301
Query: 398 RNNQISLKIKGHTDTV 445
+ + K+ GHT +V
Sbjct: 302 TSRRTIYKLPGHTGSV 317
Score = 56.4 bits (130), Expect = 1e-08
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV----PTGTRIKKL 172
+W++ + E M ++GH I + SPDGS+L T DN + VWD+ P +K
Sbjct: 206 VWDLR-KGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIF 264
Query: 173 KGHA-NFVNSVSGARRGPE--LLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFND 340
+GH NF ++ P+ + + S D + +WD R + + V +F+
Sbjct: 265 EGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHP 324
Query: 341 TAEKILSSGVDNVIKMWDI 397
T I S D I + +I
Sbjct: 325 TEPIIGSCSSDKNIYLGEI 343
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 91.1 bits (216), Expect = 4e-19
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 208
E V GH I + FS D + + + D T+ +WDV TG+ IK L GH N+ V+
Sbjct: 62 EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNF 121
Query: 209 ARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIK 385
+ ++VS S D T+++WD + + S PVT+V FN I+SS D + +
Sbjct: 122 NPQS-NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCR 180
Query: 386 MWDIRNNQ-ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+WD + I V+ + S +G ++L ++DNTLR+
Sbjct: 181 IWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRL 224
Score = 80.2 bits (189), Expect = 8e-16
Identities = 49/176 (27%), Positives = 92/176 (52%), Gaps = 6/176 (3%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IW+V G+C + V+ H+ + + F+ DGS + + + D +WD TG +K L
Sbjct: 139 IWDVTTGKC--LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDD 196
Query: 182 ANF-VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVLFNDTA 346
N V+ V + G +LV D NT++LW+ + ++ ++ Y ++S
Sbjct: 197 ENPPVSFVRFSPNGKFILVGTLD-NTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNG 255
Query: 347 EKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
++I+S DN + MW++ + ++ K++GHT+TV ++ + S S+D T+RI
Sbjct: 256 KRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRI 311
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 139
++GHT +M + P + + +G+ D TV +W
Sbjct: 281 LEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 90.2 bits (214), Expect = 7e-19
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 208
+N V++GH G + + F P TG+ D T+ +WDV TG L GH V ++
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 209 ARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIK 385
+ R + SA DD +K WD + + S+ V + + T + +L+ G D+V +
Sbjct: 227 SNR-HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCR 285
Query: 386 MWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
+WDIR + GH +TV + +++ S D T++
Sbjct: 286 VWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIK 327
Score = 58.0 bits (134), Expect = 4e-09
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 1/157 (0%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 217
+ + GH + L S +++++ D V WD+ I+ GH + V ++
Sbjct: 212 LTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLA-LHP 270
Query: 218 GPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
++L++ D+ ++WD R + + + V SV T ++++ D IK WD
Sbjct: 271 TLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWD 330
Query: 395 IRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNT 505
+R + + H +V ++L S S DNT
Sbjct: 331 LRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNT 367
Score = 44.0 bits (99), Expect = 6e-05
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Frame = +2
Query: 137 WDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP 316
W P + ++GH +V SV+ E + S D TIK+WD +
Sbjct: 162 WHAPW-KNYRVIQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVATGVLKLTLTGHIE 219
Query: 317 -VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNS 493
V + ++ + S+G D +K WD+ N++ GH V L+L LL+
Sbjct: 220 QVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGG 279
Query: 494 MDNTLRI 514
D+ R+
Sbjct: 280 RDSVCRV 286
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/86 (24%), Positives = 38/86 (44%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W++ + + + + GH + + P + TG+ D T+ WD+ G + L H
Sbjct: 286 VWDIRTKMQ-IFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHK 344
Query: 185 NFVNSVSGARRGPELLVSASDDNTIK 262
V +++ SAS DNT K
Sbjct: 345 KSVRAMT-LHPKENAFASASADNTKK 369
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 90.2 bits (214), Expect = 7e-19
Identities = 50/171 (29%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
IW+ E + V++GHT + + F+P + + +G+ D T+ +W+V TG ++ +K H+
Sbjct: 111 IWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKIL 358
++SV R G L+VSAS D + K+WDA++ + + D S V+ F+ + IL
Sbjct: 171 MPISSVHFNRDG-SLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFIL 229
Query: 359 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSW---DGAYLLSNSMDN 502
+ +D+ +K+ + + GHT+ V ++ ++ +G Y++S S DN
Sbjct: 230 VATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDN 280
Score = 85.0 bits (201), Expect = 3e-17
Identities = 45/169 (26%), Positives = 88/169 (52%), Gaps = 2/169 (1%)
Frame = +2
Query: 14 VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFV 193
+Y ++ ++GHT AI + FS DG+ L + + D T+ +W + I + +GH++ +
Sbjct: 29 IYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGI 88
Query: 194 NSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAEKILSSG 367
+ ++ + SASDD T+++WDAR + V V FN + I+S
Sbjct: 89 SDLAWS-SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGS 147
Query: 368 VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D I++W+++ + IK H+ ++ + + DG+ ++S S D + +I
Sbjct: 148 FDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Score = 65.3 bits (152), Expect = 2e-11
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IW V G+C V ++K H+ I + F+ DGS + + + D + +WD GT +K L
Sbjct: 154 IWEVKTGKC--VRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDD 211
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVLFNDTAE 349
+ S + + ++ A+ D+T+KL + + + + + +TS +
Sbjct: 212 KSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGK 271
Query: 350 KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLS--NSMDNTLRI 514
I+S DN + +WD++ I +++GHTD V +S + S N +D T+RI
Sbjct: 272 YIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRI 328
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 85.8 bits (203), Expect = 2e-17
Identities = 51/158 (32%), Positives = 88/158 (55%), Gaps = 1/158 (0%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
+KGHTG + + S D + +G+ D +V VWD T +++LKGH + V+ V
Sbjct: 895 LKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVK--MLSG 950
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 400
E +++A+ D T+K+WD R VA+ S + S+ ++D+ + ++G D V +WDIR
Sbjct: 951 ERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIR 1010
Query: 401 NNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ + K+KGHT + + + D L++ S D T R+
Sbjct: 1011 SGKQMHKLKGHTKWIRSIRMVED--TLITGSDDWTARV 1046
Score = 59.7 bits (138), Expect = 1e-09
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQL--------CF----SPDGSHLYTGATDNTVAVWDVP-TGTRIK-K 169
NV V+KGH GA+ L C D +G+TD V +WD G+ ++
Sbjct: 835 NVRVLKGHGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSELRAT 894
Query: 170 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAE 349
LKGH V ++S + RG +VS SDD ++ +WD + + S + + E
Sbjct: 895 LKGHTGTVRAIS-SDRGK--IVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGE 951
Query: 350 KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWD 469
++L++ D +KMWD+R + + + + LSL +D
Sbjct: 952 RVLTAAHDGTVKMWDVRTDMCVATVGRCSSAI--LSLEYD 989
Score = 36.7 bits (81), Expect = 0.009
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
IW++ + + +KGHT I + D L TG+ D T VW V G+ L HA
Sbjct: 1006 IWDIRSG-KQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSRGSCDAVLACHA 1062
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 364
V SV + + +++ S D ++ W+ + + + +S+L + E L
Sbjct: 1063 GPVQSVEYS-PFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSSSILSINAGENWLGI 1121
Query: 365 G-VDNVIKMWDIRNNQISLKIKG 430
G DN + ++ R + K+ G
Sbjct: 1122 GAADNSMSLFH-RPSNAGTKVSG 1143
Score = 33.1 bits (72), Expect = 0.11
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +2
Query: 356 LSSGVDNVIKMWD--IRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMD 499
+S D ++K+WD +R +++ +KGHT TV ++S D ++S S D
Sbjct: 871 ISGSTDCLVKIWDPSLRGSELRATLKGHTGTVR--AISSDRGKIVSGSDD 918
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 85.0 bits (201), Expect = 3e-17
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 208
+N V++GH G + + F P TG+ D T+ +WDV TG L GH V ++
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAV 220
Query: 209 ARRGPELLVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEKILSSGVDNVIK 385
+ R + SA DD +K WD + + S+ + V + + T + +L+ G D+V +
Sbjct: 221 SNR-HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCR 279
Query: 386 MWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
+WDIR + +D + L+ D +++ S D+T++
Sbjct: 280 VWDIRTKMQIFVLPHDSDVFSVLARPTD-PQVITGSHDSTIK 320
Score = 66.1 bits (154), Expect = 1e-11
Identities = 37/155 (23%), Positives = 70/155 (45%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 217
+ + GH G + L S +++++ D V WD+ I+ GH + V ++
Sbjct: 206 LTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLA-LHP 264
Query: 218 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 397
+++++ D+ ++WD R + + V SVL T ++++ D+ IK WD+
Sbjct: 265 TLDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDL 324
Query: 398 RNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDN 502
R + I H TV ++L +S S DN
Sbjct: 325 RYGKSMATITNHKKTVRAMALHPKENDFVSASADN 359
Score = 43.2 bits (97), Expect = 1e-04
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Frame = +2
Query: 137 WDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY- 313
W P + L+GH +V SV+ E + S D TIK+WD +
Sbjct: 156 WHAPW-KNYRVLQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVATGVLKLTLTGHIG 213
Query: 314 PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNS 493
V + ++ + S+G D +K WD+ N++ GH V L+L +L+
Sbjct: 214 QVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGG 273
Query: 494 MDNTLRI 514
D+ R+
Sbjct: 274 RDSVCRV 280
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 83.0 bits (196), Expect = 1e-16
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W + G+ ++M + GHT A+ + F + GA+ + +WDV ++ GH
Sbjct: 42 LWAI-GKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHR 100
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILS 361
+ ++V G E L S S D +K+WD RK+ + ++ S ++++ F ++S
Sbjct: 101 SNCSAVEFHPFG-EFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVS 159
Query: 362 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
G+DNV+K+WD+ ++ + K H + L L + S D T++
Sbjct: 160 GGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVK 209
Score = 70.1 bits (164), Expect = 8e-13
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
H+ + L S L+ TG D V +W + T + L GH + V+SV A E+
Sbjct: 14 HSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSV--AFDSAEV 71
Query: 230 LVSA-SDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRN 403
LV A + IKLWD + V +F ++V F+ E + S D +K+WDIR
Sbjct: 72 LVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK 131
Query: 404 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
KGH+ ++ + + DG +++S +DN +++
Sbjct: 132 KGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKV 168
Score = 59.3 bits (137), Expect = 2e-09
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Frame = +2
Query: 5 IWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IW++ + C + KGH+ I + F+PDG + +G DN V VWD+ G + + K H
Sbjct: 126 IWDIRKKGC--IQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFH 183
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKIL 358
+ S+ LL + S D T+K WD + S + V S+ F+ + L
Sbjct: 184 EGPIRSLD-FHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDG-RTL 241
Query: 359 SSGVDNVIKMW 391
G+D+ +K++
Sbjct: 242 FCGLDDSLKVY 252
Score = 56.0 bits (129), Expect = 1e-08
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Frame = +2
Query: 152 GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSV 328
G ++++ H+ VN +S ++ L ++ DD + LW K + S + V SV
Sbjct: 5 GYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSV 64
Query: 329 LFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
F+ +L+ VIK+WD+ ++ GH + + G +L S S D L
Sbjct: 65 AFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANL 124
Query: 509 RI 514
+I
Sbjct: 125 KI 126
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/75 (32%), Positives = 30/75 (40%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 226
K H G I L F P L TG+ D TV WD+ T I + A V S+ G
Sbjct: 181 KFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRT 240
Query: 227 LLVSASDDNTIKLWD 271
L D + W+
Sbjct: 241 LFCGLDDSLKVYSWE 255
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 80.2 bits (189), Expect = 8e-16
Identities = 42/151 (27%), Positives = 76/151 (50%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
G G I+ + + D + + N + VWDV +G L GH + V +V ++
Sbjct: 271 GSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRH 330
Query: 230 LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 409
+VSA+ D TIKLWD K + + ++ + + S +D +++WDI+ +
Sbjct: 331 VVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGK 390
Query: 410 ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDN 502
+ ++ GH+ VT +SLS +G +L++ DN
Sbjct: 391 LLSEVAGHSSAVTSVSLSRNGNRILTSGRDN 421
Score = 62.5 bits (145), Expect = 2e-10
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 3/157 (1%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H G + F + L+TG D V +WD +GT IK L G + ++ + +
Sbjct: 230 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMA-VTHDNKSV 288
Query: 233 VSASDDNTIKLWD---ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 403
++A+ N + +WD R R+ + V ++ ++S+ D IK+WD+
Sbjct: 289 IAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDV-SKFSSRHVVSAAYDRTIKLWDLHK 347
Query: 404 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ + T + LS DG + S MD LR+
Sbjct: 348 GYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRL 383
Score = 49.2 bits (112), Expect = 2e-06
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 7/177 (3%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGS-HLYTGATDNTVAVWDVPTGTRIKKLKG 178
+W+V G+ + + GHT + + S S H+ + A D T+ +WD+ G +
Sbjct: 299 VWDVSSGRVRHTLT--GHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLF 356
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKI 355
+N N++ + G + D N ++LWD + ++ S VTSV + +I
Sbjct: 357 TSN-CNAICLSIDGLTVFSGHMDGN-LRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRI 414
Query: 356 LSSGVDNVIKMWDIRNNQI--SLKIKGH--TDTVTGLSLSWDGAYLLSNSMDNTLRI 514
L+SG DNV ++D R +I +L+ G+ + +S D Y+ + S D ++ +
Sbjct: 415 LTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHV 471
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 77 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 256
C SPD ++ G+ D +V VW + G + LK + + S + G + L SA +
Sbjct: 452 CISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIG-KPLASADKNGY 510
Query: 257 IKLW 268
+ W
Sbjct: 511 VCTW 514
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 78.2 bits (184), Expect = 3e-15
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W + G+ ++ + GH+ I + F + GA T+ +WD+ ++ L GH
Sbjct: 136 LWAI-GKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHR 194
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILS 361
+ SV+ G E S S D +K+WD RK+ + ++ +VL F I+S
Sbjct: 195 SNCVSVNFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVS 253
Query: 362 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
G DNV+K+WD+ ++ + K H + L L + S D T++
Sbjct: 254 GGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVK 303
Score = 71.3 bits (167), Expect = 4e-13
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS-GARRGPE 226
H+ A+ L S L TG D+ V +W + I L GH++ ++SV+ A G
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEG-- 165
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRN 403
L+ + + TIKLWD + V + SV F+ E S +D +K+WDIR
Sbjct: 166 LVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 225
Query: 404 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
KGHT V L + DG +++S DN +++
Sbjct: 226 KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKV 262
Score = 60.9 bits (141), Expect = 5e-10
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
Frame = +2
Query: 5 IWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IW++ + C + KGHT + L F+PDG + +G DN V VWD+ G + + K H
Sbjct: 220 IWDIRKKGC--IHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH 277
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKIL 358
+ S+ LL + S D T+K WD + S + + V + FN + +L
Sbjct: 278 EGKIQSLD-FHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVL 336
Query: 359 SSGVDNVIKMW 391
G+ +K++
Sbjct: 337 -CGLQESLKIF 346
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 77.0 bits (181), Expect = 7e-15
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W + G+ ++ + GH+ I + F + GA T+ +WD+ ++ L GH
Sbjct: 43 LWAI-GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILS 361
+ SV G E S S D +K+WD RK+ + ++ +VL F ++S
Sbjct: 102 SNCISVDFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVS 160
Query: 362 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
G DN++K+WD+ ++ + K H + L L + S D T++
Sbjct: 161 GGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVK 210
Score = 68.9 bits (161), Expect = 2e-12
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
H+ A+ L S L TG D+ V +W + I L GH++ ++SV+ E+
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD--ASEV 72
Query: 230 LVSA-SDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRN 403
LV+A + TIKLWD + V + SV F+ E S +D +K+WDIR
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 404 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
KGHT V L + DG +++S DN +++
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKV 169
Score = 58.8 bits (136), Expect = 2e-09
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Frame = +2
Query: 5 IWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IW++ + C + KGHT + L F+PDG + +G DN V VWD+ G + + K H
Sbjct: 127 IWDIRKKGC--IHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS-FDSSYPVTSVLFNDTAEKIL 358
+ S+ LL + S D T+K WD + S + V + FN + +L
Sbjct: 185 EGQIQSLD-FHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL 243
Query: 359 SSGVDNVIKMW 391
G+ +K++
Sbjct: 244 -CGLQESLKIF 253
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 77.0 bits (181), Expect = 7e-15
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W + G+ ++ + GH+ I + F + GA T+ +WD+ ++ L GH
Sbjct: 43 LWAI-GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILS 361
+ SV G E S S D +K+WD RK+ + ++ +VL F ++S
Sbjct: 102 SNCISVDFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVS 160
Query: 362 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
G DN++K+WD+ ++ + K H + L L + S D T++
Sbjct: 161 GGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVK 210
Score = 68.9 bits (161), Expect = 2e-12
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
H+ A+ L S L TG D+ V +W + I L GH++ ++SV+ E+
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD--ASEV 72
Query: 230 LVSA-SDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRN 403
LV+A + TIKLWD + V + SV F+ E S +D +K+WDIR
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 404 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
KGHT V L + DG +++S DN +++
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKV 169
Score = 58.8 bits (136), Expect = 2e-09
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Frame = +2
Query: 5 IWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IW++ + C + KGHT + L F+PDG + +G DN V VWD+ G + + K H
Sbjct: 127 IWDIRKKGC--IHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS-FDSSYPVTSVLFNDTAEKIL 358
+ S+ LL + S D T+K WD + S + V + FN + +L
Sbjct: 185 EGQIQSLD-FHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL 243
Query: 359 SSGVDNVIKMW 391
G+ +K++
Sbjct: 244 -CGLQESLKIF 253
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 77.0 bits (181), Expect = 7e-15
Identities = 38/159 (23%), Positives = 79/159 (49%), Gaps = 1/159 (0%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 217
M + GHT + + F+ + + GA+ + +WD+ ++ GH + ++V
Sbjct: 1 MSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF 60
Query: 218 GPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
G E L S S D +++WD RK+ + ++ + ++++ F+ ++S G+DNV+K+WD
Sbjct: 61 G-EFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWD 119
Query: 395 IRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
+ ++ + K H + L L + S D T++
Sbjct: 120 LTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVK 158
Score = 60.9 bits (141), Expect = 5e-10
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 1/171 (0%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W++ + + V GH + F P G L +G++D + VWD I+ KGH
Sbjct: 33 LWDLE-ESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHT 91
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFNDTAEKILS 361
++++ + G +VS DN +K+WD + F P+ S+ F+ + +
Sbjct: 92 RGISTIEFSPDG-RWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLAT 150
Query: 362 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D +K WD+ ++ + V ++ DG L +D+ L++
Sbjct: 151 GSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFC-GLDDGLKV 200
Score = 58.8 bits (136), Expect = 2e-09
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR 214
+ KGHT I + FSPDG + +G DN V VWD+ G + + K H + S+
Sbjct: 84 IQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLD-FH 142
Query: 215 RGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
LL + S D T+K WD + + + V ++ F+ + L G+D+ +K++
Sbjct: 143 PLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQ-TLFCGLDDGLKVY 201
Score = 57.6 bits (133), Expect = 5e-09
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Frame = +2
Query: 170 LKGHANFVNSVSGARRGPELLVSA-SDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDT 343
L GH + V+SV A E+LV A + IKLWD + V +F ++V F+
Sbjct: 3 LCGHTSPVDSV--AFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF 60
Query: 344 AEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
E + S D +++WD R KGHT ++ + S DG +++S +DN +++
Sbjct: 61 GEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKV 117
Score = 37.1 bits (82), Expect = 0.007
Identities = 23/75 (30%), Positives = 31/75 (41%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 226
K H G I L F P L TG+ D TV WD+ T I + A V +++ G
Sbjct: 130 KCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQT 189
Query: 227 LLVSASDDNTIKLWD 271
L D + W+
Sbjct: 190 LFCGLDDGLKVYSWE 204
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 76.2 bits (179), Expect = 1e-14
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 2/172 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W G + +GH + ++ F P G +L T + D T +WD+ TG + +GH+
Sbjct: 324 LWKTDGTL--LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHS 381
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILS 361
V ++ + G L S D+ ++WD R + F PV SV F+ + S
Sbjct: 382 RSVYGIAFQQDGA-LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLAS 440
Query: 362 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRI 514
G DN ++WD+R + I H + V+ + +G +L + S D + I
Sbjct: 441 GGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNI 492
Score = 71.7 bits (168), Expect = 3e-13
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 1/171 (0%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W + + V+K H + FSP L T + D T +W GT ++ +GH
Sbjct: 281 LWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTD-GTLLQTFEGHL 339
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILS 361
+ + V+ G + L + S D T +LWD + + S V + F S
Sbjct: 340 DRLARVAFHPSG-KYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAAS 398
Query: 362 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
G+D++ ++WD+R + L +GH V ++ S +G +L S DN RI
Sbjct: 399 CGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRI 449
Score = 70.9 bits (166), Expect = 5e-13
Identities = 41/172 (23%), Positives = 83/172 (48%), Gaps = 2/172 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W++ E +++ +GH+ ++ + F DG+ + D+ VWD+ TG I +GH
Sbjct: 365 LWDINTGAE-LLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHI 423
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEK--IL 358
V SV+ + G L S +DN ++WD R R + + + S + + E +
Sbjct: 424 KPVFSVNFSPNGYHL-ASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLA 482
Query: 359 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
++ D + +W R+ + + GH V L ++ D + + + S D T+++
Sbjct: 483 TASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKL 534
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
+++V +GH + + FSP+G HL +G DN +WD+ + + HAN V+ V
Sbjct: 415 SILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYE 474
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKM 388
+ L +AS D + +W R + V S V S+ + I + D IK+
Sbjct: 475 PQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKL 534
Query: 389 WDIRNN 406
W N
Sbjct: 535 WTSSGN 540
Score = 56.0 bits (129), Expect = 1e-08
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVSGARRGPELLVSASDDNT 256
FS DG L T + +W++P T I LK H V + + L +AS D T
Sbjct: 263 FSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFS-PVDDCLATASADRT 321
Query: 257 IKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGH 433
KLW + +F+ + V F+ + + + ++ D ++WDI L +GH
Sbjct: 322 AKLWKT-DGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGH 380
Query: 434 TDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ +V G++ DGA S +D+ R+
Sbjct: 381 SRSVYGIAFQQDGALAASCGLDSLARV 407
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 293 ASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR--NNQISLKIKGHTDTVTGLSLSW 466
++F P+T F+ + + + + V K+W++ N I++ +K H + T + S
Sbjct: 250 SNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAV-LKDHKERATDVVFSP 308
Query: 467 DGAYLLSNSMDNTLRI 514
L + S D T ++
Sbjct: 309 VDDCLATASADRTAKL 324
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 75.4 bits (177), Expect = 2e-14
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 5/160 (3%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
M GH+ + + S DG +G+ D + +WD+ TG ++ GH V SV+ +
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 224 ELLVSASDDNTIKLWD--ARKRNPVASFDSSYP-VTSVLF--NDTAEKILSSGVDNVIKM 388
+ +VSAS D TIKLW+ + ++ D V+ V F N I+S+ D +K+
Sbjct: 119 Q-IVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 389 WDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
W+++N ++ + GH+ + +++S DG+ S D +
Sbjct: 178 WNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVI 217
Score = 50.0 bits (114), Expect = 9e-07
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Frame = +2
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP---VAS---FDSSYPVTSVLFND 340
H + V +++ +++V++S D +I LW K + VA S+ V V+ +
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 341 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ LS D +++WD+ + + + GHT V ++ S D ++S S D T+++
Sbjct: 74 DGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Score = 50.0 bits (114), Expect = 9e-07
Identities = 24/96 (25%), Positives = 51/96 (53%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+WN+ C+ + GH+G + + SPDGS +G D + +WD+ G ++ L+
Sbjct: 177 VWNLQN-CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-G 234
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPV 292
+ ++S+ + + A+ +N+I++WD ++ V
Sbjct: 235 SIIHSLCFSPN--RYWLCAATENSIRIWDLESKSVV 268
Score = 31.9 bits (69), Expect = 0.26
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 LIWNVYGQCENVMVMKGHTGAIMQ-LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 175
L+W++ E + G+I+ LCFSP+ L AT+N++ +WD+ + + ++ LK
Sbjct: 218 LLWDL---AEGKKLYSLEAGSIIHSLCFSPNRYWL-CAATENSIRIWDLESKSVVEDLK 272
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 74 LCFSPDGSHLYTGATDNTVAVWDV 145
L +S DG+ L++G TD + VW +
Sbjct: 300 LNWSADGNTLFSGYTDGVIRVWGI 323
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 74.1 bits (174), Expect = 5e-14
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 220
++KGH GA++ F+ DG++ T D T+ +W+ G IK K H V V
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDN 72
Query: 221 PELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 397
+ S D + WD + F V +V FND++ ++S+G D +++WD
Sbjct: 73 AK-FCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDC 131
Query: 398 RNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
R++ + T T +S+ ++ S+D T+R
Sbjct: 132 RSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVR 169
Score = 67.3 bits (157), Expect = 6e-12
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR 214
+ K H + + + D + + D V WDV TG I+K +GH VN+V
Sbjct: 53 IKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVK-FN 111
Query: 215 RGPELLVSASDDNTIKLWDARKRN--PVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIK 385
++VSA D ++++WD R + PV D+ V SV+ T +I+ VD ++
Sbjct: 112 DSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKT--EIIGGSVDGTVR 169
Query: 386 MWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+D+R + G V +S+S DG +L+ +D+TLR+
Sbjct: 170 TFDMRIGREMSDNLG--QPVNCISISNDGNCVLAGCLDSTLRL 210
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = +2
Query: 74 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL-LVSASDD 250
+ S DG+ + G D+T+ + D TG ++ KGH + + ++ S+D
Sbjct: 190 ISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSED 249
Query: 251 NTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 391
+ WD ++ F + VTSV ++ + +L+S VD I++W
Sbjct: 250 GLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 41.9 bits (94), Expect = 2e-04
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Frame = +2
Query: 110 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP 289
G+ D TV +D+ G + G VN +S + G +L D +T++L D
Sbjct: 162 GSVDGTVRTFDMRIGREMSDNLGQP--VNCISISNDGNCVLAGCLD-STLRLLDRTTGEL 218
Query: 290 VASF----DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLS 457
+ + S+ L N A ++ D ++ WD+ + ++ K + H VT +S
Sbjct: 219 LQVYKGHISKSFKTDCCLTNSDAH-VIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVS 277
Query: 458 LSWDGAYLLSNSMDNTLRI 514
+L++S+D T+R+
Sbjct: 278 YHPKEDCMLTSSVDGTIRV 296
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQL--CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 202
E + V KGH + C + +H+ G+ D V WD+ + K + H V SV
Sbjct: 217 ELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSV 276
Query: 203 SGARRGPELLVSASDDNTIKLW 268
S + + ++++S D TI++W
Sbjct: 277 SYHPK-EDCMLTSSVDGTIRVW 297
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 422 IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+KGH V + DG Y L+ D T+R+
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRL 44
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 73.7 bits (173), Expect = 7e-14
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 7/162 (4%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
GH A++ + FSPDG L +G+ D TV +WD+ T T + KGH N+V +V+ + G
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKH- 165
Query: 230 LVSASDDNTIKLWDARK----RNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKM 388
LVS S I W+ +K +P+ S V + + ++S D ++
Sbjct: 166 LVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARI 225
Query: 389 WDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
WDI + + + GHT VT + DG + + S D T+++
Sbjct: 226 WDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKM 266
Score = 70.1 bits (164), Expect = 8e-13
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Frame = +2
Query: 101 LYTGATDNTVAVWDVPTGTRIKK-LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 277
L +G+ D T+ +W+ + KK L GH VN V + G + + SAS D +++LW+
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDG-KWIASASFDKSVRLWNGI 390
Query: 278 KRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 454
V F PV V ++ + +LS D+ +K+W+IR ++ + GH D V +
Sbjct: 391 TGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAV 450
Query: 455 SLSWDGAYLLSNSMDNTLRI 514
S DG ++S D L++
Sbjct: 451 DWSPDGEKVVSGGKDRVLKL 470
Score = 67.7 bits (158), Expect = 4e-12
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
+ GH + + FSPDG + + + D +V +W+ TG + +GH V VS +
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWS-ADS 414
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 391
LL+S S D+T+K+W+ R + + V +V ++ EK++S G D V+K+W
Sbjct: 415 RLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 66.9 bits (156), Expect = 8e-12
Identities = 45/171 (26%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
IW++ + ++++ + GHT A+ + + DG +YTG+ D T+ +W+ G I++LKGH
Sbjct: 225 IWDITLK-KSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIRELKGHG 282
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 364
+++NS+ A +L + + D+T + + + A Y T D+ E+++S
Sbjct: 283 HWINSL--ALSTEYVLRTGAFDHTGRQYPPNEEKQKAL--ERYNKTK---GDSPERLVSG 335
Query: 365 GVDNVIKMWDIR-NNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D + +W+ + Q ++ GH V + S DG ++ S S D ++R+
Sbjct: 336 SDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRL 386
Score = 64.9 bits (151), Expect = 3e-11
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG-TRIKKLKGH 181
+W++Y + + KGH ++ + +SPDG HL +G+ + W+ G L GH
Sbjct: 135 LWDLYTETP-LFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGH 193
Query: 182 ANFVNSVSGA---RRGP-ELLVSASDDNTIKLWD-ARKRNPVASFDSSYPVTSVLFNDTA 346
++ +S P V++S D ++WD K++ + + VT V +
Sbjct: 194 KKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG 253
Query: 347 EKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
I + D IKMW+ ++ ++KGH + L+LS + L + + D+T R
Sbjct: 254 -IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE-YVLRTGAFDHTGR 306
Score = 58.8 bits (136), Expect = 2e-09
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +2
Query: 5 IWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
+WN + GQ V V +GH G + Q+ +S D L +G+ D+T+ +W++ T + L GH
Sbjct: 386 LWNGITGQF--VTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGH 443
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLW 268
A+ V +V + G E +VS D +KLW
Sbjct: 444 ADEVFAVDWSPDG-EKVVSGGKDRVLKLW 471
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 73.3 bits (172), Expect = 9e-14
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 3/173 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK-GH 181
IW+VY + + GH A+ +CFS DGS T D + WD TG I G
Sbjct: 309 IWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGK 368
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKIL 358
+V ++ +L++ D I WD +D V ++ F D + +
Sbjct: 369 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFV 428
Query: 359 SSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+S D +++W+ + I + H ++ +S+ +G +L + S+DN + I
Sbjct: 429 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILI 481
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +2
Query: 176 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPV--ASFDSSYPVTSVLFNDTAE 349
GH V+++ + LL+SA D +K+WD + V + F++
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 350 KILSSGVDNVIKMWDIRNNQI 412
K L++G D IK WD Q+
Sbjct: 340 KFLTAGYDKNIKYWDTETGQV 360
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Frame = +2
Query: 50 GH--TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
GH G Q+ FSPDG + +G + WD + + LK H
Sbjct: 498 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQ 557
Query: 224 ELLVSASDDNTIKLWD 271
+ + D IK WD
Sbjct: 558 SKVATCGWDGLIKYWD 573
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 72.9 bits (171), Expect = 1e-13
Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 5/160 (3%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
+ GH+ + + S DG +G+ D + +WD+ TG ++ GH V SV+ +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 224 ELLVSASDDNTIKLWD--ARKRNPVASFDSSYP-VTSVLF--NDTAEKILSSGVDNVIKM 388
+ +VSAS D TIKLW+ + ++ D V+ V F N I+S+ D +K+
Sbjct: 119 Q-IVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 389 WDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
W+++N ++ + GH+ + +++S DG+ S D +
Sbjct: 178 WNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVI 217
Score = 52.8 bits (121), Expect = 1e-07
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Frame = +2
Query: 170 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP---VAS---FDSSYPVTSVL 331
++ H + V +++ +++V+AS D +I LW K + VA S+ V V+
Sbjct: 11 MRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVV 70
Query: 332 FNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
+ + LS D +++WD+ + + + GHT V ++ S D ++S S D T++
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIK 130
Query: 512 I 514
+
Sbjct: 131 L 131
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/96 (25%), Positives = 51/96 (53%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+WN+ C+ + GH+G + + SPDGS +G D + +WD+ G ++ L+
Sbjct: 177 VWNLQN-CKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-G 234
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPV 292
+ ++S+ + + A+ +N+I++WD ++ V
Sbjct: 235 SIIHSLCFSPN--RYWLCAATENSIRIWDLESKSVV 268
Score = 31.9 bits (69), Expect = 0.26
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 LIWNVYGQCENVMVMKGHTGAIMQ-LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 175
L+W++ E + G+I+ LCFSP+ L AT+N++ +WD+ + + ++ LK
Sbjct: 218 LLWDL---AEGKKLYSLEAGSIIHSLCFSPNRYWL-CAATENSIRIWDLESKSVVEDLK 272
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 74 LCFSPDGSHLYTGATDNTVAVWDV 145
L +S DGS L++G TD V VW +
Sbjct: 300 LNWSADGSTLFSGYTDGVVRVWGI 323
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 72.9 bits (171), Expect = 1e-13
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Frame = +2
Query: 89 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 268
D HL +G D V WDV T I L GH ++V + +LV+ S D+T+K+W
Sbjct: 147 DKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVW 206
Query: 269 DAR--KRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD-IRNNQISLKIKGHTD 439
DAR N +A + PV V++ + I ++G N +K+WD I ++ ++ H
Sbjct: 207 DARVHTSNWIAEINHGLPVEDVVYLPSGGLIATAG-GNSVKVWDLIGGGKMVCSMESHNK 265
Query: 440 TVTGLSLS 463
TVT L ++
Sbjct: 266 TVTSLRVA 273
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 2/114 (1%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 244
+ +CF DG+ V V+D+ ++ L+ H+ V + LVS
Sbjct: 96 VSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGG 155
Query: 245 DDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 400
DD +K WD ++ Y +++ D+ +K+WD R
Sbjct: 156 DDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDAR 209
Score = 38.7 bits (86), Expect = 0.002
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Frame = +2
Query: 77 CFSPDGSHLYTGATDNTVAVWD--VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 250
C + S L TG+ D+TV VWD V T I ++ H V V G L++ +
Sbjct: 186 CSPVNDSMLVTGSYDHTVKVWDARVHTSNWIAEI-NHGLPVEDVVYLPSGG--LIATAGG 242
Query: 251 NTIKLWD-ARKRNPVASFDS-SYPVTS--VLFNDTAE-KILSSGVDNVIKMWDIRNNQIS 415
N++K+WD V S +S + VTS V ++AE +++S +D +K++D +++
Sbjct: 243 NSVKVWDLIGGGKMVCSMESHNKTVTSLRVARMESAESRLVSVALDGYMKVFDYGRAKVT 302
Query: 416 LKIKGHTDTVTGLSLSWDGA 475
++ + L LS DG+
Sbjct: 303 YSMR-FPAPLMSLGLSPDGS 321
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 71.7 bits (168), Expect = 3e-13
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR 214
++ +GH + + +SPD L TGA DN V VW+V +GT H N V ++
Sbjct: 342 ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMA 401
Query: 215 RGPELLVSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAEKILSSGVDNV-IK 385
LL SAS D T++ WD ++ ++ + P S+ + + + + + +D+ I
Sbjct: 402 DNHSLL-SASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIF 460
Query: 386 MWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+W + QI + GH V GL S L S+S D T+R+
Sbjct: 461 VWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRL 503
Score = 51.6 bits (118), Expect = 3e-07
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +2
Query: 80 FSPDGSHLYTGATD-NTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 256
F+ G+ L G + VWD T T I K +GH VN V+ + +LL + +DDN
Sbjct: 314 FNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYS-PDSQLLATGADDNK 372
Query: 257 IKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 400
+K+W+ +F + + VT++ F +LS+ +D ++ WD +
Sbjct: 373 VKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFK 421
Score = 35.9 bits (79), Expect = 0.016
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 220
++ GH + L FSP L + + D TV +WDV + H + V +V+ G
Sbjct: 472 ILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDG 531
Query: 221 PELLVSASDDNTIKLWD 271
+ L S++ D I WD
Sbjct: 532 KQ-LASSTLDGQINFWD 547
Score = 33.5 bits (73), Expect = 0.086
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 178
+W+V+ V + H ++ + F PDG L + D + WD G + ++G
Sbjct: 503 LWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 559
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 305 SSYPVTSVLFNDTAEKILSSGVDNV--IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAY 478
S +T+ +FN+ L+ G + + +WD R LK +GH V ++ S D
Sbjct: 305 SRQKLTTAVFNERGNW-LTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQL 363
Query: 479 LLSNSMDNTLRI 514
L + + DN +++
Sbjct: 364 LATGADDNKVKV 375
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +2
Query: 74 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK--------LKGHANFVNSVSGARRGPEL 229
LC+S DG ++ T + ++D+ +++ L G +F++S GP
Sbjct: 587 LCYSADGGYILAAGTSRYICMYDIADQVLLRRFQISHNLSLDGVLDFLHSKKMTEAGPID 646
Query: 230 LVSASDDNT 256
L+ DDN+
Sbjct: 647 LI--DDDNS 653
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 71.7 bits (168), Expect = 3e-13
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR 214
++ +GH + + +SPD L TGA DN V VW+V +GT H N V ++
Sbjct: 382 ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMA 441
Query: 215 RGPELLVSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAEKILSSGVDNV-IK 385
LL SAS D T++ WD ++ ++ + P S+ + + + + + +D+ I
Sbjct: 442 DNHSLL-SASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIF 500
Query: 386 MWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+W + QI + GH V GL S L S+S D T+R+
Sbjct: 501 VWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRL 543
Score = 51.6 bits (118), Expect = 3e-07
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +2
Query: 80 FSPDGSHLYTGATD-NTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 256
F+ G+ L G + VWD T T I K +GH VN V+ + +LL + +DDN
Sbjct: 354 FNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYS-PDSQLLATGADDNK 412
Query: 257 IKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 400
+K+W+ +F + + VT++ F +LS+ +D ++ WD +
Sbjct: 413 VKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFK 461
Score = 35.9 bits (79), Expect = 0.016
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 220
++ GH + L FSP L + + D TV +WDV + H + V +V+ G
Sbjct: 512 ILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDG 571
Query: 221 PELLVSASDDNTIKLWD 271
+ L S++ D I WD
Sbjct: 572 KQ-LASSTLDGQINFWD 587
Score = 33.5 bits (73), Expect = 0.086
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 178
+W+V+ V + H ++ + F PDG L + D + WD G + ++G
Sbjct: 543 LWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 599
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 305 SSYPVTSVLFNDTAEKILSSGVDNV--IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAY 478
S +T+ +FN+ L+ G + + +WD R LK +GH V ++ S D
Sbjct: 345 SRQKLTTAVFNERGNW-LTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQL 403
Query: 479 LLSNSMDNTLRI 514
L + + DN +++
Sbjct: 404 LATGADDNKVKV 415
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +2
Query: 74 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK--------LKGHANFVNSVSGARRGPEL 229
LC+S DG ++ T + ++D+ +++ L G +F++S GP
Sbjct: 627 LCYSADGGYILAAGTSRYICMYDIADQVLLRRFQISHNLSLDGVLDFLHSKKMTEAGPID 686
Query: 230 LVSASDDNT 256
L+ DDN+
Sbjct: 687 LI--DDDNS 693
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 70.9 bits (166), Expect = 5e-13
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV-SGARRGP 223
KGH G +M + G L T D V VWDV G +GH V+S+
Sbjct: 99 KGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNK 158
Query: 224 ELLVSASDDNTIKLWDARKRNP----VASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKM 388
+L+S SDD T+++WD +N +A + + VTS+ ++ + S+G D V+ +
Sbjct: 159 NILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNL 218
Query: 389 WDIRN 403
WD+ +
Sbjct: 219 WDLHD 223
Score = 63.3 bits (147), Expect = 9e-11
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
++G + + L SPD L++ + VWD+ T I+ KGH V ++ G
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASG- 114
Query: 224 ELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFN-DTAEKILSSGVDN-VIKMWD 394
LL +A D + +WD F V+S+LF+ D+ + IL SG D+ +++WD
Sbjct: 115 GLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWD 174
Query: 395 IRNNQISLK----IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ K ++ H VT ++LS DG L S D + +
Sbjct: 175 LNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNL 218
Score = 60.9 bits (141), Expect = 5e-10
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 220
V+ H I + + + S + TG+ D T ++W +P + LKGH + SV +
Sbjct: 494 VVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVD 553
Query: 221 PELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDI 397
+ +++AS D T+K+W + + +F+ + V F + +S G D ++K+W++
Sbjct: 554 -QCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNV 612
Query: 398 RNNQISLKIKGHTDTVTGLSL 460
++ H D V L++
Sbjct: 613 NTSECIATYDQHEDKVWALAV 633
Score = 60.9 bits (141), Expect = 5e-10
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
+V+ +KGH I + FS + T + D TV +W + G+ +K +GH + V S
Sbjct: 533 HVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFI 592
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKM 388
G + VS D +KLW+ +A++D V ++ E I + G D VI +
Sbjct: 593 TDGTQ-FVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINL 651
Query: 389 W 391
W
Sbjct: 652 W 652
Score = 57.6 bits (133), Expect = 5e-09
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 12/182 (6%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDV---------PTG 154
+WN + + V GH G I+ + F+ S +G+ D T+ VW + P
Sbjct: 430 LWNATSK-SCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPIN 488
Query: 155 TRIKKL-KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSV 328
+ + + H +NSV+ AR L+ + S+D T +W V + + SV
Sbjct: 489 LKTRSVVAAHDKDINSVAVARND-SLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSV 547
Query: 329 LFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
F+ + ++++ D +K+W I + +GHT +V S DG +S D L
Sbjct: 548 EFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLL 607
Query: 509 RI 514
++
Sbjct: 608 KL 609
Score = 54.8 bits (126), Expect = 3e-08
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Frame = +2
Query: 41 VMKGHTGAIMQL--CFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
V+ GH ++ L C S G+ L TG+ D TV +W+ + + I GH + +V+ A
Sbjct: 396 VLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFA 455
Query: 212 RRGPELLVSASDDNTIKLW-------------DARKRNPVASFDSSYPVTSVLFNDTAEK 352
++ VS S D T+K+W + + R+ VA+ D +V ND+
Sbjct: 456 KKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSL-- 513
Query: 353 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ + D +W + + + +KGH + + S +++ S D T++I
Sbjct: 514 VCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKI 567
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 70.9 bits (166), Expect = 5e-13
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
+ GH+ + + S DG +G+ D + +WD+ G ++ GH V SV+ +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 224 ELLVSASDDNTIKLWD--ARKRNPVASFDSSYP--VTSVLF--NDTAEKILSSGVDNVIK 385
+ +VSAS D TIKLW+ + ++ + V+ V F N I+S+ D +K
Sbjct: 119 Q-IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Query: 386 MWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
+W++ N ++ + GHT V+ +++S DG+ S D +
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVV 218
Score = 51.2 bits (117), Expect = 4e-07
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Frame = +2
Query: 170 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS------SYPVTSVL 331
++ H + V +++ +++VSAS D +I LW K + S+ V V+
Sbjct: 11 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVV 70
Query: 332 FNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
+ + LS D +++WD+ + + GHT V ++ S D ++S S D T++
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIK 130
Query: 512 I 514
+
Sbjct: 131 L 131
Score = 50.0 bits (114), Expect = 9e-07
Identities = 25/96 (26%), Positives = 51/96 (53%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+WN+ C+ + GHTG + + SPDGS +G D V +WD+ G ++ L+ +
Sbjct: 178 VWNL-SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN- 235
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPV 292
+ ++++ + + A+ ++ IK+WD ++ V
Sbjct: 236 SVIHALCFSPN--RYWLCAATEHGIKIWDLESKSIV 269
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 74 LCFSPDGSHLYTGATDNTVAVWDV 145
L +S DGS L++G TD + VW +
Sbjct: 301 LNWSADGSTLFSGYTDGVIRVWGI 324
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 69.7 bits (163), Expect = 1e-12
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN--FVNSVSGA-----RRGPELLVS 238
FSPDG L + + D + VWD +G K L+ A+ F+ R E+L S
Sbjct: 221 FSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLAS 280
Query: 239 ASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIS 415
S D IK+W R + FD+ S VTS+ F+ ++LS+ D ++ +++ ++
Sbjct: 281 GSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLL 340
Query: 416 LKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ +GHT V + DG+ +++ S D T+++
Sbjct: 341 KEFRGHTSYVNHAIFTSDGSRIITASSDCTVKV 373
Score = 57.6 bits (133), Expect = 5e-09
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IW + G C + H+ + L FS DGS L + + D T + + +G +K+ +GH
Sbjct: 289 IWRIRTGVC--IRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGH 346
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPV 319
++VN G +++AS D T+K+WD++ + + +F P+
Sbjct: 347 TSYVNHAIFTSDGSR-IITASSDCTVKVWDSKTTDCLQTFKPPPPL 391
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 69.7 bits (163), Expect = 1e-12
Identities = 42/176 (23%), Positives = 85/176 (48%), Gaps = 5/176 (2%)
Frame = +2
Query: 2 LIWNVYGQCENVMVMKGH---TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 172
++WN CE++ ++KGH T + L + + S +G+ D +V + ++ TG + L
Sbjct: 222 IVWNPK-TCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSL 280
Query: 173 KGHANFVNSVSGARRGPELLVSASD--DNTIKLWDARKRNPVASFDSSYPVTSVLFNDTA 346
H + V V + + ++A+ D + +WD + P + VTS+ + T+
Sbjct: 281 NSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHEEGVTSLTWIGTS 340
Query: 347 EKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ + + + + +WD GH D V +S+S + +++S S+DNT R+
Sbjct: 341 KYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARV 396
Score = 56.8 bits (131), Expect = 8e-09
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 4/174 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W + G + + GH ++ L FS DG L +G D V ++D +GT L G
Sbjct: 97 LWKI-GNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPG 155
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILS 361
+ V RG ++++ S+D ++ +W+A K + F + VT F + I +
Sbjct: 156 AGIEWVRWHPRG-HIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICT 214
Query: 362 SGVDNVIKMWDIRNNQISLKIKG---HTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D + +W+ + + +KG HT+ +T L ++ + + +S S D ++ I
Sbjct: 215 GSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHI 268
Score = 51.6 bits (118), Expect = 3e-07
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 2/162 (1%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 205
++V GH G + L SP D + + TG D+ +W + G +L GH + V+ ++
Sbjct: 61 DSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLA 120
Query: 206 GARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVI 382
+ G +LL S D ++++DA D + V ++ +L+ D +
Sbjct: 121 FSYDG-QLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSL 179
Query: 383 KMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
MW+ GH VT + DG + + S D +L
Sbjct: 180 WMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASL 221
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H + L + +L TG + TV++WD G + GH + V ++S + +
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAIS-VSTNTDFI 385
Query: 233 VSASDDNTIKLWDA 274
VS S DNT +++++
Sbjct: 386 VSVSVDNTARVFES 399
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 344 AEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
A + + G D+ +W I N + ++ GH D+V+ L+ S+DG L S +D ++I
Sbjct: 83 ATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQI 139
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 69.3 bits (162), Expect = 1e-12
Identities = 37/156 (23%), Positives = 67/156 (42%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 220
++ GH+G + FSP G + + + D T+ +W + KGH V + G
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 221 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 400
S S D T ++W + P+ ++ V ++ I + D +++WD++
Sbjct: 473 -HYFASCSHDRTARIWSMDRIQPLRIMAGH--LSDVDWHPNCNYIATGSSDKTVRLWDVQ 529
Query: 401 NNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
+ GH V L++S DG Y+ S D T+
Sbjct: 530 TGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTI 565
Score = 69.3 bits (162), Expect = 1e-12
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
+W+V G+C + + GH ++ L SPDG ++ +G D T+ +WD+ T I L GH
Sbjct: 525 LWDVQTGECVRIFI--GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGH 582
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWD 271
+ V S+S + G LL S S D T+KLWD
Sbjct: 583 NSCVWSLSYSGEG-SLLASGSADCTVKLWD 611
Score = 68.1 bits (159), Expect = 3e-12
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
N++ KGH + FSP G + + + D T +W + ++ + GH + V+
Sbjct: 452 NLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDWHPNC 511
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKM 388
+ + S D T++LWD + V F V S+ + + S D I M
Sbjct: 512 N----YIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMM 567
Query: 389 WDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
WD+ + + GH V LS S +G+ L S S D T+++
Sbjct: 568 WDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKL 609
Score = 64.9 bits (151), Expect = 3e-11
Identities = 38/137 (27%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
IW++ + + + +M GH + + + P+ +++ TG++D TV +WDV TG ++ GH
Sbjct: 486 IWSM-DRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHR 541
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWD---ARKRNPVASFDSSYPVTSVLFNDTAEKI 355
+ V S++ + G + S +D TI +WD AR P+ +S V S+ ++ +
Sbjct: 542 SMVLSLAMSPDG-RYMASGDEDGTIMMWDLSTARCITPLMGHNSC--VWSLSYSGEGSLL 598
Query: 356 LSSGVDNVIKMWDIRNN 406
S D +K+WD+ ++
Sbjct: 599 ASGSADCTVKLWDVTSS 615
Score = 46.4 bits (105), Expect = 1e-05
Identities = 41/144 (28%), Positives = 61/144 (42%)
Frame = +2
Query: 83 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 262
S DGS + G +D+++ VWD+ A + SGA L + +D +
Sbjct: 361 SHDGSLVAGGFSDSSIKVWDM------------AKIGQAGSGA------LQAENDSSDQS 402
Query: 263 LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDT 442
+ +R+ S PV S F+ + +LSS D I++W + N + KGH
Sbjct: 403 IGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYP 462
Query: 443 VTGLSLSWDGAYLLSNSMDNTLRI 514
V S G Y S S D T RI
Sbjct: 463 VWDAQFSPFGHYFASCSHDRTARI 486
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +2
Query: 2 LIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK-- 175
++W++ + + GH + L +S +GS L +G+ D TV +WDV + T++ K +
Sbjct: 566 MMWDL-STARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEK 624
Query: 176 -GHANFVNSV 202
G++N + S+
Sbjct: 625 NGNSNRLRSL 634
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 785
Score = 68.9 bits (161), Expect = 2e-12
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Frame = +2
Query: 5 IWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKG 178
IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++ + G
Sbjct: 534 IWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISG 591
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIL 358
HA V S+ + ELL S +N I+ WD A +S T V F + L
Sbjct: 592 HAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGAS---TQVRFQPRTGQFL 648
Query: 359 SSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMD 499
++ +N + ++DI NN + I KGH+ V + S +G + S S D
Sbjct: 649 AAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED 696
Score = 51.6 bits (118), Expect = 3e-07
Identities = 29/129 (22%), Positives = 62/129 (48%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
I+++ + V + KGH+ + +C+SP+G L +++ V +W + +G I +L
Sbjct: 658 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGDCIHELSNSG 716
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 364
N +SV P+LLV I+LW+ + + ++++ + + + S+
Sbjct: 717 NKFHSVVFHPSYPDLLV-IGGYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASA 775
Query: 365 GVDNVIKMW 391
D +K+W
Sbjct: 776 SHDKSVKIW 784
Score = 46.8 bits (106), Expect = 9e-06
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
FS DG L + D V +W++ T + HA+ + V R L ++S D TI
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR-FRPNSTQLATSSFDKTI 574
Query: 260 KLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKG 430
K+WDA S + PV S+ F+ ++L S +N I+ WDI N +KG
Sbjct: 575 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 633
Query: 431 HTDTV 445
+ V
Sbjct: 634 ASTQV 638
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 68.9 bits (161), Expect = 2e-12
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Frame = +2
Query: 5 IWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKG 178
IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++ + G
Sbjct: 536 IWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISG 593
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIL 358
HA V S+ + ELL S +N I+ WD A +S T V F + L
Sbjct: 594 HAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGAS---TQVRFQPRTGQFL 650
Query: 359 SSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMD 499
++ +N + ++DI NN + I KGH+ V + S +G + S S D
Sbjct: 651 AAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED 698
Score = 51.6 bits (118), Expect = 3e-07
Identities = 29/129 (22%), Positives = 62/129 (48%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
I+++ + V + KGH+ + +C+SP+G L +++ V +W + +G I +L
Sbjct: 660 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGDCIHELSNSG 718
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 364
N +SV P+LLV I+LW+ + + ++++ + + + S+
Sbjct: 719 NKFHSVVFHPSYPDLLV-IGGYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASA 777
Query: 365 GVDNVIKMW 391
D +K+W
Sbjct: 778 SHDKSVKIW 786
Score = 46.8 bits (106), Expect = 9e-06
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
FS DG L + D V +W++ T + HA+ + V R L ++S D TI
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR-FRPNSTQLATSSFDKTI 576
Query: 260 KLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKG 430
K+WDA S + PV S+ F+ ++L S +N I+ WDI N +KG
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 635
Query: 431 HTDTV 445
+ V
Sbjct: 636 ASTQV 640
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 68.9 bits (161), Expect = 2e-12
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Frame = +2
Query: 5 IWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKG 178
IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++ + G
Sbjct: 536 IWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISG 593
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIL 358
HA V S+ + ELL S +N I+ WD A +S T V F + L
Sbjct: 594 HAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGAS---TQVRFQPRTGQFL 650
Query: 359 SSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMD 499
++ +N + ++DI NN + I KGH+ V + S +G + S S D
Sbjct: 651 AAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED 698
Score = 51.6 bits (118), Expect = 3e-07
Identities = 29/129 (22%), Positives = 62/129 (48%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
I+++ + V + KGH+ + +C+SP+G L +++ V +W + +G I +L
Sbjct: 660 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGDCIHELSNSG 718
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 364
N +SV P+LLV I+LW+ + + ++++ + + + S+
Sbjct: 719 NKFHSVVFHPSYPDLLV-IGGYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASA 777
Query: 365 GVDNVIKMW 391
D +K+W
Sbjct: 778 SHDKSVKIW 786
Score = 46.8 bits (106), Expect = 9e-06
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
FS DG L + D V +W++ T + HA+ + V R L ++S D TI
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR-FRPNSTQLATSSFDKTI 576
Query: 260 KLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKG 430
K+WDA S + PV S+ F+ ++L S +N I+ WDI N +KG
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 635
Query: 431 HTDTV 445
+ V
Sbjct: 636 ASTQV 640
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 68.9 bits (161), Expect = 2e-12
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Frame = +2
Query: 5 IWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKG 178
IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++ + G
Sbjct: 536 IWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISG 593
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIL 358
HA V S+ + ELL S +N I+ WD A +S T V F + L
Sbjct: 594 HAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGAS---TQVRFQPRTGQFL 650
Query: 359 SSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMD 499
++ +N + ++DI NN + I KGH+ V + S +G + S S D
Sbjct: 651 AAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED 698
Score = 51.6 bits (118), Expect = 3e-07
Identities = 29/129 (22%), Positives = 62/129 (48%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
I+++ + V + KGH+ + +C+SP+G L +++ V +W + +G I +L
Sbjct: 660 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGDCIHELSNSG 718
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 364
N +SV P+LLV I+LW+ + + ++++ + + + S+
Sbjct: 719 NKFHSVVFHPSYPDLLV-IGGYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASA 777
Query: 365 GVDNVIKMW 391
D +K+W
Sbjct: 778 SHDKSVKIW 786
Score = 46.8 bits (106), Expect = 9e-06
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
FS DG L + D V +W++ T + HA+ + V R L ++S D TI
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR-FRPNSTQLATSSFDKTI 576
Query: 260 KLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKG 430
K+WDA S + PV S+ F+ ++L S +N I+ WDI N +KG
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 635
Query: 431 HTDTV 445
+ V
Sbjct: 636 ASTQV 640
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 68.9 bits (161), Expect = 2e-12
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Frame = +2
Query: 5 IWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKG 178
IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++ + G
Sbjct: 536 IWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISG 593
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIL 358
HA V S+ + ELL S +N I+ WD A +S T V F + L
Sbjct: 594 HAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGAS---TQVRFQPRTGQFL 650
Query: 359 SSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMD 499
++ +N + ++DI NN + I KGH+ V + S +G + S S D
Sbjct: 651 AAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED 698
Score = 51.6 bits (118), Expect = 3e-07
Identities = 29/129 (22%), Positives = 62/129 (48%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
I+++ + V + KGH+ + +C+SP+G L +++ V +W + +G I +L
Sbjct: 660 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGDCIHELSNSG 718
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 364
N +SV P+LLV I+LW+ + + ++++ + + + S+
Sbjct: 719 NKFHSVVFHPSYPDLLV-IGGYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASA 777
Query: 365 GVDNVIKMW 391
D +K+W
Sbjct: 778 SHDKSVKIW 786
Score = 46.8 bits (106), Expect = 9e-06
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
FS DG L + D V +W++ T + HA+ + V R L ++S D TI
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR-FRPNSTQLATSSFDKTI 576
Query: 260 KLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKG 430
K+WDA S + PV S+ F+ ++L S +N I+ WDI N +KG
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 635
Query: 431 HTDTV 445
+ V
Sbjct: 636 ASTQV 640
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 68.5 bits (160), Expect = 2e-12
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Frame = +2
Query: 119 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 298
+ V VWDV + ++K H V S+ + P LL S SDD ++KLW + + +
Sbjct: 555 EGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGT 614
Query: 299 FDSSYPVTSVLF-NDTAEKILSSGVDNVIKMWDIRNNQISL-KIKGHTDTVTGLSLSWDG 472
+ + V F ++T + D+ + +D+RN ++ L + GH TV+ + D
Sbjct: 615 IKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DS 673
Query: 473 AYLLSNSMDNTLRI 514
+ L+S+S DNTL++
Sbjct: 674 STLVSSSTDNTLKL 687
Score = 52.8 bits (121), Expect = 1e-07
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
+W+V + + V MK H + + +S D + L +G+ D +V +W + G I +K
Sbjct: 560 VWDV-ARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK 618
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSYPVTSVLFNDTAEKIL 358
AN + G L ++D + + +D R + P+ + + S + + ++
Sbjct: 619 ANICCVQFPSETGRSLAFGSAD-HKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLV 677
Query: 359 SSGVDNVIKMWDIRN-----NQISL-KIKGHTDTVTGLSLSWDGAYLLSNSMDN 502
SS DN +K+WD+ N+ L GHT+ + LS Y+ + S N
Sbjct: 678 SSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETN 731
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 287 PVASFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL- 460
PV S ++ + +N + ++ SS + V+++WD+ NQ+ ++K H V +
Sbjct: 526 PVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYS 585
Query: 461 SWDGAYLLSNSMDNTLRI 514
S D L S S D ++++
Sbjct: 586 SADPTLLASGSDDGSVKL 603
Score = 35.9 bits (79), Expect = 0.016
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG------TRIKKLKGHANFVNSVS 205
M GH + + F D S L + +TDNT+ +WD+ T + GH N N V
Sbjct: 658 MIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFV- 715
Query: 206 GARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTAEKILS 361
G + + S+ N + ++ PV S F + PV+ + +D ++ I S
Sbjct: 716 GLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFISS 769
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 68.5 bits (160), Expect = 2e-12
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Frame = +2
Query: 119 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 298
+ V VWDV + ++K H V S+ + P LL S SDD ++KLW + + +
Sbjct: 555 EGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGT 614
Query: 299 FDSSYPVTSVLF-NDTAEKILSSGVDNVIKMWDIRNNQISL-KIKGHTDTVTGLSLSWDG 472
+ + V F ++T + D+ + +D+RN ++ L + GH TV+ + D
Sbjct: 615 IKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DS 673
Query: 473 AYLLSNSMDNTLRI 514
+ L+S+S DNTL++
Sbjct: 674 STLVSSSTDNTLKL 687
Score = 52.8 bits (121), Expect = 1e-07
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
+W+V + + V MK H + + +S D + L +G+ D +V +W + G I +K
Sbjct: 560 VWDV-ARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK 618
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSYPVTSVLFNDTAEKIL 358
AN + G L ++D + + +D R + P+ + + S + + ++
Sbjct: 619 ANICCVQFPSETGRSLAFGSAD-HKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLV 677
Query: 359 SSGVDNVIKMWDIRN-----NQISL-KIKGHTDTVTGLSLSWDGAYLLSNSMDN 502
SS DN +K+WD+ N+ L GHT+ + LS Y+ + S N
Sbjct: 678 SSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETN 731
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 287 PVASFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL- 460
PV S ++ + +N + ++ SS + V+++WD+ NQ+ ++K H V +
Sbjct: 526 PVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYS 585
Query: 461 SWDGAYLLSNSMDNTLRI 514
S D L S S D ++++
Sbjct: 586 SADPTLLASGSDDGSVKL 603
Score = 35.9 bits (79), Expect = 0.016
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG------TRIKKLKGHANFVNSVS 205
M GH + + F D S L + +TDNT+ +WD+ T + GH N N V
Sbjct: 658 MIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFV- 715
Query: 206 GARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTAEKILS 361
G + + S+ N + ++ PV S F + PV+ + +D ++ I S
Sbjct: 716 GLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFISS 769
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 68.1 bits (159), Expect = 3e-12
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 7/165 (4%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSH-----LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 205
++ GHT + L + P L +G+ D V VW++ G I+ LKGH V+
Sbjct: 61 ILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQ---MQVT 117
Query: 206 GARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVI 382
G E +VS+S D T+K W R V S+D+ P+ +V+ + E ++S D +
Sbjct: 118 GVAIDNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAVIRLPSGE-LVSGSSDASL 174
Query: 383 KMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
K+W + SL+ + GHTDTV GL++ D + LS S D ++R+
Sbjct: 175 KLW---KGKTSLQTLSGHTDTVRGLAVMPDLGF-LSASHDGSIRL 215
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
++ + GHT + L PD L + + D ++ +W + +G + ++ GH + V SV
Sbjct: 182 SLQTLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLWAL-SGEVLLEMVGHTSLVYSVDAH 239
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
G L+VSAS+D K+W + V S + + F +T + I+++ D V+++W
Sbjct: 240 SSG--LIVSASEDRHAKIW--KDGVCVQSLEHPGCIWDAKFLETGD-IVTACSDGVVRVW 294
Query: 392 DIRNNQIS--LKIKGHTDTVTGLSLS 463
+R++ I+ ++I + ++ LS
Sbjct: 295 TVRHDAIADQMEIDAYDSQISQYKLS 320
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 68.1 bits (159), Expect = 3e-12
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 7/165 (4%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSH-----LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 205
++ GHT + L + P L +G+ D V VW++ G I+ LKGH V+
Sbjct: 61 ILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQ---MQVT 117
Query: 206 GARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVI 382
G E +VS+S D T+K W R V S+D+ P+ +V+ + E ++S D +
Sbjct: 118 GVAIDNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAVIRLPSGE-LVSGSSDASL 174
Query: 383 KMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
K+W + SL+ + GHTDTV GL++ D + LS S D ++R+
Sbjct: 175 KLW---KGKTSLQTLSGHTDTVRGLAVMPDLGF-LSASHDGSIRL 215
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
++ + GHT + L PD L + + D ++ +W + +G + ++ GH + V SV
Sbjct: 182 SLQTLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLWAL-SGEVLLEMVGHTSLVYSVDAH 239
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
G L+VSAS+D K+W + V S + + F +T + I+++ D V+++W
Sbjct: 240 SSG--LIVSASEDRHAKIW--KDGVCVQSLEHPGCIWDAKFLETGD-IVTACSDGVVRVW 294
Query: 392 DIRNNQIS--LKIKGHTDTVTGLSLS 463
+R++ I+ ++I + ++ LS
Sbjct: 295 TVRHDAIADQMEIDAYDSQISQYKLS 320
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 67.3 bits (157), Expect = 6e-12
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARRG 220
++ HT I + FSP L T + D TV VWD G ++ GH++ V S+
Sbjct: 689 LEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIK 748
Query: 221 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 400
+L+ S +DN I+ W + + T + F K L++ N++ + D+
Sbjct: 749 DDLICSCDNDNEIRYWSINNGSCTRVYKGG--STQIRFQPRVGKYLAASSANLVNVLDVE 806
Query: 401 NNQISLKIKGHTDTVTGLSLSWD--GAYLLSNSMD 499
I ++GH + + S+ WD G +L S S D
Sbjct: 807 TQAIRHSLQGHANPIN--SVCWDPSGDFLASVSED 839
Score = 48.4 bits (110), Expect = 3e-06
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 4/170 (2%)
Frame = +2
Query: 17 YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVN 196
Y N + + G Q+ F P ++ N V V DV T L+GHAN +N
Sbjct: 763 YWSINNGSCTRVYKGGSTQIRFQPRVGKYLAASSANLVNVLDVETQAIRHSLQGHANPIN 822
Query: 197 SVSGARRGPELLVSASDDNTIKLW---DARKRNPVASFD-SSYPVTSVLFNDTAEKILSS 364
SV G + L S S+D +K+W + V + S +F+ +L
Sbjct: 823 SVCWDPSG-DFLASVSED-MVKVWTLGTGSEGECVHELSCNGNKFQSCVFHPAYPSLLVI 880
Query: 365 GVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
G +++W++ N+ ++ + H +T L++S + S S D +++
Sbjct: 881 GCYQSLELWNMSENK-TMTLPAHEGLITSLAVSTATGLVASASHDKLVKL 929
Score = 43.6 bits (98), Expect = 8e-05
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE--LLVSASDDN 253
FS DG L + D +W T L+ H + + R P L ++S D
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDI---RFSPSQLRLATSSFDK 715
Query: 254 TIKLWDA-RKRNPVASF-DSSYPVTSVLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKI 424
T+++WDA K + +F S VTS+ F+ + ++ S DN I+ W I N +
Sbjct: 716 TVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVY 775
Query: 425 KG 430
KG
Sbjct: 776 KG 777
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 66.1 bits (154), Expect = 1e-11
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
GH + + + P S L +G D V +WD +G + L GH N V SV + G
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNG-NW 324
Query: 230 LVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRN 403
L++AS D IKL+D R + SF + VTS+ ++ E+ SG D I W + +
Sbjct: 325 LLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGH 384
Query: 404 NQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
++I H ++V L+ G L S S D+T +
Sbjct: 385 ENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTK 421
Score = 55.6 bits (128), Expect = 2e-08
Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 21/191 (10%)
Frame = +2
Query: 5 IWNVYGQCENV-MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
+WN GQ N M+++ H I + +S + +++ +G T+ W H
Sbjct: 149 LWN--GQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAH 206
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS------------------ 307
+ +S + + S SDD T+K+WD K +S
Sbjct: 207 KESIRDLSFCKTDLKFC-SCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPCNA 265
Query: 308 --SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYL 481
+ V SV ++ T ++S G D ++K+WD R+ + + GH + V + + +G +L
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 482 LSNSMDNTLRI 514
L+ S D +++
Sbjct: 326 LTASKDQIIKL 336
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
+ GH ++ + ++ +G+ L T + D + ++D+ T ++ +GH V S++
Sbjct: 306 LHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHE 365
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSY--PVTSVLFNDTAEKILSSGVDNVIKMW 391
E VS S D +I W NP +++ V + ++ + S D+ K W
Sbjct: 366 EYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +2
Query: 62 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 241
+I ++ ++P G L TG+ +W+ + L+ H + S+ + +VS
Sbjct: 125 SINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWS-HNENYMVSG 183
Query: 242 SDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
D T+K W N A+ + + + F T K S D +K+WD
Sbjct: 184 DDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWD 235
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = +2
Query: 8 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 139
W V + + + H ++ L + P G L +G+ D+T W
Sbjct: 380 WIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 66.1 bits (154), Expect = 1e-11
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Frame = +2
Query: 107 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 286
+G V +WD+ AN +S +GA L + N I + +
Sbjct: 144 SGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHG 203
Query: 287 --PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL 460
P + V ++ NDT ++S G + V+++WD R S+K++GHTD V L L
Sbjct: 204 YTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLL 263
Query: 461 SWDGAYLLSNSMDNTLRI 514
G + LS S D+ +R+
Sbjct: 264 DSTGRFCLSGSSDSMIRL 281
Score = 58.4 bits (135), Expect = 3e-09
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 220
+ KGH ++ L + G+ L +G T+ + VWD TG++ KL+GH + V + G
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTG 267
Query: 221 PELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 397
+S S D+ I+LWD ++ + ++ + V ++ N + + S G D + + D+
Sbjct: 268 -RFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDL 326
Query: 398 RNNQ-ISLKIKGH 433
+ + L K H
Sbjct: 327 ATRESVLLCTKEH 339
Score = 45.6 bits (103), Expect = 2e-05
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Frame = +2
Query: 101 LYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 277
L T + N ++V P+ G KGH V +++ G +LVS + +++WD R
Sbjct: 185 LRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGT-MLVSGGTEKVLRVWDPR 243
Query: 278 KRNPVASFDSSYPVTSVLFNDTAEKI-LSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 454
+ VL D+ + LS D++I++WD+ + HTD+V L
Sbjct: 244 TGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWAL 303
Query: 455 SLSWDGAYLLSNSMDNTL 508
+ + +++ S D L
Sbjct: 304 ACNPSFSHVYSGGRDQCL 321
Score = 43.6 bits (98), Expect = 8e-05
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 238
+++ S D S+L+TG+ D T+ W D + H ++VN + A G LVS
Sbjct: 43 VLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA--GESTLVS 100
Query: 239 ASDDNTIKLWDARKRNPVASF---DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 397
S D T+K WD S Y + + S G+ + +WDI
Sbjct: 101 CSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 35.5 bits (78), Expect = 0.021
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 217
M ++GHT + L G +G++D+ + +WD+ G + + L +A +SV
Sbjct: 249 MKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL--GQQ-RCLHTYAVHTDSVWALAC 305
Query: 218 GPEL--LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
P + S D + L D R V +P+ + D + I + D+ ++ W
Sbjct: 306 NPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNS--IWVATTDSSVERW 363
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 66.1 bits (154), Expect = 1e-11
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Frame = +2
Query: 107 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 286
+G V +WD+ AN +S +GA L + N I + +
Sbjct: 144 SGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHG 203
Query: 287 --PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL 460
P + V ++ NDT ++S G + V+++WD R S+K++GHTD V L L
Sbjct: 204 YTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLL 263
Query: 461 SWDGAYLLSNSMDNTLRI 514
G + LS S D+ +R+
Sbjct: 264 DSTGRFCLSGSSDSMIRL 281
Score = 58.4 bits (135), Expect = 3e-09
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 220
+ KGH ++ L + G+ L +G T+ + VWD TG++ KL+GH + V + G
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTG 267
Query: 221 PELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 397
+S S D+ I+LWD ++ + ++ + V ++ N + + S G D + + D+
Sbjct: 268 -RFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDL 326
Query: 398 RNNQ-ISLKIKGH 433
+ + L K H
Sbjct: 327 ATRESVLLCTKEH 339
Score = 45.6 bits (103), Expect = 2e-05
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Frame = +2
Query: 101 LYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 277
L T + N ++V P+ G KGH V +++ G +LVS + +++WD R
Sbjct: 185 LRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGT-MLVSGGTEKVLRVWDPR 243
Query: 278 KRNPVASFDSSYPVTSVLFNDTAEKI-LSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 454
+ VL D+ + LS D++I++WD+ + HTD+V L
Sbjct: 244 TGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWAL 303
Query: 455 SLSWDGAYLLSNSMDNTL 508
+ + +++ S D L
Sbjct: 304 ACNPSFSHVYSGGRDQCL 321
Score = 43.6 bits (98), Expect = 8e-05
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 238
+++ S D S+L+TG+ D T+ W D + H ++VN + A G LVS
Sbjct: 43 VLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA--GESTLVS 100
Query: 239 ASDDNTIKLWDARKRNPVASF---DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 397
S D T+K WD S Y + + S G+ + +WDI
Sbjct: 101 CSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 35.5 bits (78), Expect = 0.021
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 217
M ++GHT + L G +G++D+ + +WD+ G + + L +A +SV
Sbjct: 249 MKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL--GQQ-RCLHTYAVHTDSVWALAC 305
Query: 218 GPEL--LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
P + S D + L D R V +P+ + D + I + D+ ++ W
Sbjct: 306 NPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNS--IWVATTDSSVERW 363
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 66.1 bits (154), Expect = 1e-11
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Frame = +2
Query: 17 YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFV 193
Y + + V + H I + P ++ + + D + +WD G ++ +GH+++V
Sbjct: 86 YNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYV 145
Query: 194 NSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEK--ILSS 364
V+ + SAS D TIK+W+ +P + D+ V V + +K +++
Sbjct: 146 MQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITG 205
Query: 365 GVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D+ K+WD + ++GHT V+ +S + +++ S D T+RI
Sbjct: 206 SDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRI 255
Score = 51.2 bits (117), Expect = 4e-07
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKLKG 178
IWN+ G + + H + + + G +L TG+ D+T VWD T + ++ L+G
Sbjct: 169 IWNL-GSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDA 274
H + V++VS P ++++ S+D T+++W A
Sbjct: 228 HTHNVSAVSFHPELP-IIITGSEDGTVRIWHA 258
Score = 41.5 bits (93), Expect = 3e-04
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W+ Y V ++GHT + + F P+ + TG+ D TV +W T L
Sbjct: 213 VWD-YQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDT-AEKILS 361
V ++ G +G +V D+ +I + R+ PVAS D+S + N+ I S
Sbjct: 272 ERVWAI-GHIKGSRRVVIGYDEGSIMVKLGRE-IPVASMDNSGKIIWAKHNEIHTVNIKS 329
Query: 362 SGVDNV 379
G D V
Sbjct: 330 VGADEV 335
Score = 33.1 bits (72), Expect = 0.11
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +2
Query: 164 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFND 340
+K + V SV P +L S T+ +W+ + + V SFD + PV S F
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYS-GTLCIWNYQTQTMVKSFDVTELPVRSAKFIA 67
Query: 341 TAEKILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ +++ D I++++ N +K+ + H D + +++ Y+LS+S D +++
Sbjct: 68 RKQWVVAGADDMFIRVYNY-NTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKL 125
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR 214
VM ++GHT ++ L +SPD S L +G+ DNTV +W++ TG L+GH + V V+
Sbjct: 111 VMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDP 170
Query: 215 RGPELLVSASDDNTIKLW 268
G + S SDD T+ +W
Sbjct: 171 IG-SFIASQSDDKTVIIW 187
Score = 44.8 bits (101), Expect = 3e-05
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 23/177 (12%)
Frame = +2
Query: 53 HTGA-IMQLCFSPDGSHLYTGATDNTVAVWD---VPTGTRI-KKLKGHANFVNSVSGARR 217
H G I + P+G TG D+ D + T R+ L+ H VN V A+
Sbjct: 11 HEGLQIFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWAKN 70
Query: 218 GPELLVSASDDNTIKLWDARKRNPVASFDS-------SYPVTSVLFNDTAEKI------- 355
+ S SDD I++ + + + F S ++ L TA+ +
Sbjct: 71 S-RYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSPD 129
Query: 356 ---LSSG-VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
L+SG +DN + +W++R + ++GH V G++ G+++ S S D T+ I
Sbjct: 130 DSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVII 186
Score = 33.9 bits (74), Expect = 0.065
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IWN+ G C V+ +GH + + + P GS + + + D TV +W + GH
Sbjct: 144 IWNMRTGMCTTVL--RGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTG-AIMQLCFSPDGSHLYTGATDNTVAV 136
+W G + V K G +++ L +SPDG L+ + D TVA+
Sbjct: 311 VWTT-GSARPLFVAKHFFGQSVVDLSWSPDGYSLFACSLDGTVAM 354
Score = 27.5 bits (58), Expect = 5.7
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Frame = +2
Query: 140 DVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP- 316
DV + L+GH V ++ + +L S S DNT+ +W+ R
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSP-DDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSL 162
Query: 317 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGH 433
V V ++ I S D + +W + ++ + GH
Sbjct: 163 VKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 65.7 bits (153), Expect = 2e-11
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 6/175 (3%)
Frame = +2
Query: 5 IWNV-YGQCENVMVMKGHTG----AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 169
IW+V G C + G A+ + S S + G D ++ +WD GT
Sbjct: 43 IWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSAS-SLVAVGYADGSIRIWDTEKGTCEVN 101
Query: 170 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTA 346
H V ++ + G +L S S DN I LWD + + VT ++F D
Sbjct: 102 FNSHKGAVTALRYNKVG-SMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGG 160
Query: 347 EKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
+K++SS D +++WD+ + GH V + + Y+++ S D LR
Sbjct: 161 KKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELR 215
Score = 61.3 bits (142), Expect = 4e-10
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
NV MK + ++ + SPD H+ D+TV V+ + + L GH V + +
Sbjct: 533 NVKSMKMNDD-VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDIS 591
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVAS-FDSSYPVTSVLFNDTAEKILSSGVDNVIKM 388
G EL+V+ S D +K+W + S F V V F + S G D ++K
Sbjct: 592 SDG-ELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKY 650
Query: 389 WDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
WD + L ++GH + L++S G +L++ S D ++R
Sbjct: 651 WDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMR 691
Score = 58.0 bits (134), Expect = 4e-09
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 5/152 (3%)
Frame = +2
Query: 74 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN----FVNSVSGARRGPELLVSA 241
+ + G ++ A + V +W V G K L ++ + S A L+
Sbjct: 24 IAYDSTGKYVLAPALEK-VGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAVG 82
Query: 242 SDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISL 418
D +I++WD K +F+S VT++ +N + S DN I +WD+
Sbjct: 83 YADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLF 142
Query: 419 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+++GH D VT L G L+S+S D LR+
Sbjct: 143 RLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRV 174
Score = 54.0 bits (124), Expect = 6e-08
Identities = 33/134 (24%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IW+ G CE + H GA+ L ++ GS L +G+ DN + +WDV + + +L+GH
Sbjct: 90 IWDTEKGTCE--VNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGH 147
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEK-IL 358
+ V + G + LVS+S D +++WD ++ + + + D E+ ++
Sbjct: 148 RDQVTDLVFLDGGKK-LVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVV 206
Query: 359 SSGVDNVIKMWDIR 400
+ D ++ + ++
Sbjct: 207 TGSADQELRFYAVK 220
Score = 39.1 bits (87), Expect = 0.002
Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Frame = +2
Query: 20 GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN---F 190
G V +K H G I + P+ S T + D+ V W+ ++K+ G A
Sbjct: 475 GSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEY----QVKQKSGKATKKLT 530
Query: 191 VNSVSGARRGPELLVSASD-----------DNTIKLW--DARKRNPVASFDSSYPVTSVL 331
V++V + ++L A D+T+K++ D+ K ++ + PV +
Sbjct: 531 VSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFY-LSLYGHKLPVMCID 589
Query: 332 FNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
+ E I++ D +K+W + I H D+V G+ + YL S D ++
Sbjct: 590 ISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVK 649
Score = 30.7 bits (66), Expect = 0.61
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 142
E+++ ++GH I L S G L TG+ D ++ WD
Sbjct: 657 EHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 65.3 bits (152), Expect = 2e-11
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Frame = +2
Query: 95 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 274
+H+ + + V VWDV T + + + H SV +R P +LVS SDD +K+W
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCT 493
Query: 275 RKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQISLKI-KGHTDTVT 448
R+ V + D + V +N + ++ G D+ I +D+RN L + GH V+
Sbjct: 494 RQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVS 553
Query: 449 GLSLSWDGAYLLSNSMDNTLRI 514
+ + L S S D+TLR+
Sbjct: 554 YVKFLSNNE-LASASTDSTLRL 574
Score = 45.2 bits (102), Expect = 3e-05
Identities = 37/172 (21%), Positives = 74/172 (43%), Gaps = 2/172 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFS-PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
+W+V + +++M + H + FS + S L +G+ D V VW + +
Sbjct: 447 VWDVTTR-QSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMK 505
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSYPVTSVLFNDTAEKIL 358
AN + V + S D+ I +D R P+ F S + + ++
Sbjct: 506 AN-ICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELA 564
Query: 359 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
S+ D+ +++WD+++N +GHT+ + L+ + YL S N + +
Sbjct: 565 SASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYV 616
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 65.3 bits (152), Expect = 2e-11
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Frame = +2
Query: 17 YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFV 193
Y + V V + H+ I + P ++ + + D + +WD G ++ +GH+++V
Sbjct: 86 YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYV 145
Query: 194 NSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEK--ILSS 364
V+ + SAS D TIK+W+ +P + D+ V V + +K +++
Sbjct: 146 MQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITG 205
Query: 365 GVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D+ K+WD + ++GHT V+ + + +++ S D T+RI
Sbjct: 206 SDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKLKG 178
IWN+ G + + H + + + G +L TG+ D+T VWD T + ++ L+G
Sbjct: 169 IWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDA 274
H + V++V P ++++ S+D T+++W A
Sbjct: 228 HTHNVSAVCFHPELP-IIITGSEDGTVRIWHA 258
Score = 42.3 bits (95), Expect = 2e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W+ Y V ++GHT + +CF P+ + TG+ D TV +W T L
Sbjct: 213 VWD-YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFND-TAEKILS 361
V ++ G + +V D+ TI + R+ PVAS D++ + N+ I S
Sbjct: 272 ERVWAI-GYIKSSRRVVIGYDEGTIMVKLGRE-IPVASMDNTGKIIWAKHNEIQTANIKS 329
Query: 362 SGVD 373
G D
Sbjct: 330 IGAD 333
Score = 30.3 bits (65), Expect = 0.80
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +2
Query: 164 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFND 340
+KL + V SV P +L S T+ +W+ + + SF+ + PV S F
Sbjct: 9 RKLAQRSERVKSVDLHPTEPWILASLYS-GTLCIWNYQTQVMAKSFEVTELPVRSAKFVA 67
Query: 341 TAEKILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ +++ D I++++ N +K+ + H+D + +++ Y+LS+S D +++
Sbjct: 68 RKQWVVAGADDMYIRVYNY-NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKL 125
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 64.9 bits (151), Expect = 3e-11
Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGA--IMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLK 175
+W++ G+ + + GH + +++ CF D S + +G+ D+ V +W++ ++ L
Sbjct: 423 LWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLS 482
Query: 176 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 286
GH+ VN VS + P +L SASDD TI++W K N
Sbjct: 483 GHSMTVNCVSWNPKNPRMLASASDDQTIRIWGPGKPN 519
Score = 56.4 bits (130), Expect = 1e-08
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNS 199
E V ++ H + + FS G +L T ++D T +W V +++ L+ H N V+
Sbjct: 215 ETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSF 274
Query: 200 VSGARRGPELLVSASDDNTIKLWDARK---RNPVASFDSSYPVTSVL-FNDTAEKIL-SS 364
VS + +LL + + +KLWD R+ + ++ + V+S F D+ + SS
Sbjct: 275 VSWSPDDTKLLTCGNAE-VLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSS 333
Query: 365 GVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ I MWD N+I V L+++ DG +++ D +RI
Sbjct: 334 DPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRI 383
Score = 43.2 bits (97), Expect = 1e-04
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 7/170 (4%)
Frame = +2
Query: 2 LIWNVY--GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 175
+IW V + E ++ H + + +SPD + L T + +WDV TG ++
Sbjct: 249 IIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGV-LRHTF 307
Query: 176 GHANFVNSVSGARRGPE---LLVSASD-DNTIKLWDARKRNPVASFDSSYP-VTSVLFND 340
G+ N +VS P+ L+ +SD + I +WD A + P V +
Sbjct: 308 GNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTP 367
Query: 341 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSN 490
E +++ D I++ ++ ++ +T LS+S DG + + N
Sbjct: 368 DGESMITVFSDKEIRILNLETK--VERVISEEQPITSLSISGDGKFFIVN 415
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 244
++ L +PDG + T +D + + ++ T +++++ + S+S + G +V+ S
Sbjct: 360 VVDLAVTPDGESMITVFSDKEIRILNLET--KVERVISEEQPITSLSISGDGKFFIVNLS 417
Query: 245 DDNTIKLWD--ARKRNPV---ASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 409
I LWD + P+ S Y + S + I S D+ + +W+++N +
Sbjct: 418 CQE-IHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTK 476
Query: 410 ISLKIKGHTDTVTGLSLSWDGAYLL-SNSMDNTLRI 514
+ GH+ TV +S + +L S S D T+RI
Sbjct: 477 PLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRI 512
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 64.9 bits (151), Expect = 3e-11
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR------IKKLKGHANFVN 196
V +GHT + L +S G L +G DN V +WD + + +L+ H + V
Sbjct: 259 VETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVK 318
Query: 197 SVSGARRGPELLVSASD--DNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG- 367
+++ LL + D TIK W+ + S D+ V S+L++ ++LSS
Sbjct: 319 ALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHG 378
Query: 368 -VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
N + +W + ++ GHT V ++ S DG + S + D TLR
Sbjct: 379 FTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLR 427
Score = 54.8 bits (126), Expect = 3e-08
Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK-G 178
+W+ G ++ + G + + ++PDG H+ G ++ V +WD + +++ LK G
Sbjct: 164 LWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGG 223
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEK 352
H + V S++ +L + D I D R R+P+ + V + ++ + ++
Sbjct: 224 HQSRVGSLAW---NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQ 280
Query: 353 ILSSGVDNVIKMWD 394
+ S G DNV+ +WD
Sbjct: 281 LASGGNDNVVHIWD 294
Score = 50.0 bits (114), Expect = 9e-07
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Frame = +2
Query: 113 ATDNTVAVWDVPTGT--RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 286
A D+TV +WD TG+ + + V S++ A G + V ++ ++LWD+
Sbjct: 157 ALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSE-VQLWDSASNR 215
Query: 287 PVASFDSSYP--VTSVLFNDTAEKILSSGVDNVIKMWDIR-NNQISLKIKGHTDTVTGLS 457
+ + + V S+ +N+ + + G+D +I D+R + I +GHT V GL
Sbjct: 216 QLRTLKGGHQSRVGSLAWNNHI--LTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLK 273
Query: 458 LSWDGAYLLSNSMDNTLRI 514
S G L S DN + I
Sbjct: 274 WSGSGQQLASGGNDNVVHI 292
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 145
+W Y + + GHT ++ + SPDG + + A D T+ W+V
Sbjct: 386 LWK-YPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 64.9 bits (151), Expect = 3e-11
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR------IKKLKGHANFVN 196
V +GHT + L +S G L +G DN V +WD + + +L+ H + V
Sbjct: 249 VETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVK 308
Query: 197 SVSGARRGPELLVSASD--DNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG- 367
+++ LL + D TIK W+ + S D+ V S+L++ ++LSS
Sbjct: 309 ALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHG 368
Query: 368 -VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
N + +W + ++ GHT V ++ S DG + S + D TLR
Sbjct: 369 FTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLR 417
Score = 54.8 bits (126), Expect = 3e-08
Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK-G 178
+W+ G ++ + G + + ++PDG H+ G ++ V +WD + +++ LK G
Sbjct: 154 LWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGG 213
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEK 352
H + V S++ +L + D I D R R+P+ + V + ++ + ++
Sbjct: 214 HQSRVGSLAW---NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQ 270
Query: 353 ILSSGVDNVIKMWD 394
+ S G DNV+ +WD
Sbjct: 271 LASGGNDNVVHIWD 284
Score = 50.0 bits (114), Expect = 9e-07
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Frame = +2
Query: 113 ATDNTVAVWDVPTGT--RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 286
A D+TV +WD TG+ + + V S++ A G + V ++ ++LWD+
Sbjct: 147 ALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSE-VQLWDSASNR 205
Query: 287 PVASFDSSYP--VTSVLFNDTAEKILSSGVDNVIKMWDIR-NNQISLKIKGHTDTVTGLS 457
+ + + V S+ +N+ + + G+D +I D+R + I +GHT V GL
Sbjct: 206 QLRTLKGGHQSRVGSLAWNNHI--LTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLK 263
Query: 458 LSWDGAYLLSNSMDNTLRI 514
S G L S DN + I
Sbjct: 264 WSGSGQQLASGGNDNVVHI 282
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 145
+W Y + + GHT ++ + SPDG + + A D T+ W+V
Sbjct: 376 LWK-YPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 64.5 bits (150), Expect = 4e-11
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
Frame = +2
Query: 23 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 202
Q + V + GH + L +S D L +G DN + VW+ + I KL H V ++
Sbjct: 287 QSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAI 346
Query: 203 SGARRGPELLVS--ASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--V 370
+ + LL S + D I+ W+ N + S D+ V ++ ++ +I+S+
Sbjct: 347 TWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQVCNLAWSKNVNEIVSTHGYS 406
Query: 371 DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
N I +W + + GH+ V L+ S DG +++ + D TLR
Sbjct: 407 QNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLR 453
Score = 47.2 bits (107), Expect = 7e-06
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
G ++ + ++ +GS++ G + V VWD R++ + GH ++ R +
Sbjct: 213 GPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWNSR---I 269
Query: 230 LVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 403
L S S D I D R ++ S V + ++ ++ S G DN + +W+ +
Sbjct: 270 LSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHS 329
Query: 404 NQISLKIKGHTDTVTGLSLSWDGAYLLSN 490
Q LK+ HT V ++ S + LL++
Sbjct: 330 QQPILKLTEHTAAVKAITWSPHQSSLLAS 358
Score = 40.3 bits (90), Expect = 8e-04
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 2 LIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 145
++W Y V + GH+ ++ L SPDG + TGA D T+ W+V
Sbjct: 411 MLWK-YPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 64.1 bits (149), Expect = 5e-11
Identities = 29/96 (30%), Positives = 57/96 (59%)
Frame = +2
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 406
L++SA +K+WD +KR + +D + ++++ + + D VI+++D+
Sbjct: 488 LMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVYHRVNGLLATVADDFVIRLYDVVTL 547
Query: 407 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
++ + +GHTD +T L S DG +++S+SMD +LRI
Sbjct: 548 KMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRI 583
Score = 44.0 bits (99), Expect = 6e-05
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGA 211
V +GHT I LCFS DG + + + D ++ +WDV +I + H + + ++S +
Sbjct: 550 VREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGV--HVDVPITALSLS 607
Query: 212 RRGPELLVSASDDNTIKLW 268
L + SD N + LW
Sbjct: 608 PNMDVLATAHSDQNGVYLW 626
Score = 42.3 bits (95), Expect = 2e-04
Identities = 37/178 (20%), Positives = 74/178 (41%), Gaps = 8/178 (4%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+WN+ + + + KG ++ SP + G D + V ++ I + HA
Sbjct: 165 LWNINTK-KMLYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFE-HA 222
Query: 185 N--FVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEK-- 352
+ V ++S + G LL S I +W+ K+ + ++ + + N A +
Sbjct: 223 SRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPV 282
Query: 353 ILSSGVDNVIKMWDIRNNQISLKI----KGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
++S+ DN +KMW N ++ GH+ + +G ++LS D R+
Sbjct: 283 LMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRL 340
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/98 (20%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +2
Query: 101 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 280
L T A D + ++DV T +++ +GH + + + + G + ++S+S D ++++WD
Sbjct: 530 LATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDG-KWVISSSMDGSLRIWDVIL 588
Query: 281 RNPVASFDSSYPVTSVLFNDTAEKILSSGVD-NVIKMW 391
+ P+T++ + + + ++ D N + +W
Sbjct: 589 AKQIDGVHVDVPITALSLSPNMDVLATAHSDQNGVYLW 626
Score = 26.6 bits (56), Expect = 9.9
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL---- 172
IWN+ + ++ H +I+ L F + L + + DN++ +W T +L
Sbjct: 251 IWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFR 310
Query: 173 KGHANFVNSVSGARRGPELLVSASDDNTIKLW 268
GH+ + G +L SA D +L+
Sbjct: 311 SGHSAPPLCIRFYSNGRHIL-SAGQDRAFRLF 341
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 64.1 bits (149), Expect = 5e-11
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV---SGARRGPELLV 235
+ Q+ D + + + NTV ++ TG + KGH++ VN + S + P +L
Sbjct: 44 VFQIVPKIDWTAIAVSLSTNTVKLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLH 103
Query: 236 SASDDNTIKLWDARKRNPVASFD--SSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN- 406
S S D TI+ WD R V+ D + + S + A+ +L+ G + +WD RN+
Sbjct: 104 SCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSK 163
Query: 407 QISLKIKGHTDTVT 448
Q++ + H D VT
Sbjct: 164 QVACLEESHMDDVT 177
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 374 NVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGA----YLLSNSMDNTLR 511
N +K++ Q + KGH+DTV ++ S D A L S S D T+R
Sbjct: 63 NTVKLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIR 112
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 63.7 bits (148), Expect = 7e-11
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
G++ I + FS DG + G++D+++ V+D+ + H + VN+V A L
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 230 LVSASDDNTIKLWDAR----KRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWD 394
++S SDDN K+WD R + P VT + +S+G D IK+WD
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Query: 395 IR 400
IR
Sbjct: 347 IR 348
Score = 49.6 bits (113), Expect = 1e-06
Identities = 38/144 (26%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Frame = +2
Query: 107 TGATDNTVAVWDVPTGTRIKKLK--GHANFVNSVSGARRGPELLVSASDDNTIKLWDAR- 277
+G+T++ V ++ G + G++ + SV + G E++ +SDD+ I ++D
Sbjct: 202 SGSTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTDGREVVAGSSDDS-IYVYDLEA 260
Query: 278 KRNPVASFDSSYPVTSVLFNDTAEKILSSGVD-NVIKMWDIR----NNQISLKIKGHTDT 442
R + + + V +V F D + ++ SG D N+ K+WD R ++ + + GH +
Sbjct: 261 NRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEG 320
Query: 443 VTGLSLSWDGAYLLSNSMDNTLRI 514
VT + DG Y +SN D T+++
Sbjct: 321 VTFIDSRGDGRYFISNGKDQTIKL 344
Score = 42.7 bits (96), Expect = 1e-04
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Frame = +2
Query: 53 HTGAIMQLCFSPD-GSHLYTGATDNTVAVWD--------VPTGTRIKKLKGHANFVNSVS 205
HT + +CF+ + G+ + +G+ DN VWD P G + L+G F++S
Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEG-VTFIDSRG 328
Query: 206 GARRGPELLVSASDDNTIKLWDARKRNPVA 295
R +S D TIKLWD RK + A
Sbjct: 329 DGR----YFISNGKDQTIKLWDIRKMSSSA 354
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 63.7 bits (148), Expect = 7e-11
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Frame = +2
Query: 17 YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFV 193
Y + V V + H+ I + P ++ + + D + +WD G ++ +GH+++V
Sbjct: 86 YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYV 145
Query: 194 NSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEK--ILSS 364
V + SAS D TIK+W+ +P + D+ V V + +K +++
Sbjct: 146 MQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITG 205
Query: 365 GVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D+ K+WD + + GHT V+ + + +++ S D T+RI
Sbjct: 206 SDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
Score = 63.7 bits (148), Expect = 7e-11
Identities = 33/132 (25%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGH 181
+W+ + +GH+ +MQ+ F+P ++ + A+ D T+ +W++ + L H
Sbjct: 125 LWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
Query: 182 ANFVNSVSGARRGPE-LLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKI 355
VN V G + L++ SDD+T K+WD + ++ V + D ++ V++V F+ I
Sbjct: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPII 244
Query: 356 LSSGVDNVIKMW 391
++ D +++W
Sbjct: 245 ITGSEDGTVRIW 256
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKLKG 178
IWN+ G + + H + + + G +L TG+ D+T VWD T + ++ L G
Sbjct: 169 IWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDG 227
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDA 274
H + V++V P ++++ S+D T+++W A
Sbjct: 228 HTHNVSAVCFHPELP-IIITGSEDGTVRIWHA 258
Score = 42.7 bits (96), Expect = 1e-04
Identities = 31/102 (30%), Positives = 47/102 (46%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W+ Y V + GHT + +CF P+ + TG+ D TV +W T L
Sbjct: 213 VWD-YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS 310
V ++ G + +V D+ TI + R+ PVAS DSS
Sbjct: 272 ERVWAI-GYIKSSRRVVIGYDEGTIMVKLGRE-IPVASMDSS 311
Score = 30.3 bits (65), Expect = 0.80
Identities = 26/119 (21%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +2
Query: 164 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFND 340
+K + V SV P +L S T+ +W+ + + SF+ + PV S F
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYS-GTVCIWNYQTQTITKSFEVTELPVRSAKFIP 67
Query: 341 TAEKILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ +++ D I++++ N +K+ + H+D + +++ Y+LS+S D +++
Sbjct: 68 RKQWVVAGADDMYIRVYNY-NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKL 125
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 63.7 bits (148), Expect = 7e-11
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Frame = +2
Query: 17 YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFV 193
Y + V V + H+ I + P ++ + + D + +WD G ++ +GH+++V
Sbjct: 86 YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYV 145
Query: 194 NSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEK--ILSS 364
V + SAS D TIK+W+ +P + D+ V V + +K +++
Sbjct: 146 MQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITG 205
Query: 365 GVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D+ K+WD + + GHT V+ + + +++ S D T+RI
Sbjct: 206 SDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
Score = 63.7 bits (148), Expect = 7e-11
Identities = 33/132 (25%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGH 181
+W+ + +GH+ +MQ+ F+P ++ + A+ D T+ +W++ + L H
Sbjct: 125 LWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
Query: 182 ANFVNSVSGARRGPE-LLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKI 355
VN V G + L++ SDD+T K+WD + ++ V + D ++ V++V F+ I
Sbjct: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPII 244
Query: 356 LSSGVDNVIKMW 391
++ D +++W
Sbjct: 245 ITGSEDGTVRIW 256
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKLKG 178
IWN+ G + + H + + + G +L TG+ D+T VWD T + ++ L G
Sbjct: 169 IWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDG 227
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDA 274
H + V++V P ++++ S+D T+++W A
Sbjct: 228 HTHNVSAVCFHPELP-IIITGSEDGTVRIWHA 258
Score = 42.7 bits (96), Expect = 1e-04
Identities = 31/102 (30%), Positives = 47/102 (46%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W+ Y V + GHT + +CF P+ + TG+ D TV +W T L
Sbjct: 213 VWD-YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS 310
V ++ G + +V D+ TI + R+ PVAS DSS
Sbjct: 272 ERVWAI-GYIKSSRRVVIGYDEGTIMVKLGRE-IPVASMDSS 311
Score = 30.3 bits (65), Expect = 0.80
Identities = 26/119 (21%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +2
Query: 164 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFND 340
+K + V SV P +L S T+ +W+ + + SF+ + PV S F
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYS-GTVCIWNYQTQTITKSFEVTELPVRSAKFIP 67
Query: 341 TAEKILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ +++ D I++++ N +K+ + H+D + +++ Y+LS+S D +++
Sbjct: 68 RKQWVVAGADDMYIRVYNY-NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKL 125
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 63.7 bits (148), Expect = 7e-11
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Frame = +2
Query: 17 YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFV 193
Y + V V + H+ I + P ++ + + D + +WD G ++ +GH+++V
Sbjct: 86 YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYV 145
Query: 194 NSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEK--ILSS 364
V + SAS D TIK+W+ +P + D+ V V + +K +++
Sbjct: 146 MQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITG 205
Query: 365 GVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D+ K+WD + + GHT V+ + + +++ S D T+RI
Sbjct: 206 SDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
Score = 63.7 bits (148), Expect = 7e-11
Identities = 33/132 (25%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGH 181
+W+ + +GH+ +MQ+ F+P ++ + A+ D T+ +W++ + L H
Sbjct: 125 LWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
Query: 182 ANFVNSVSGARRGPE-LLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKI 355
VN V G + L++ SDD+T K+WD + ++ V + D ++ V++V F+ I
Sbjct: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPII 244
Query: 356 LSSGVDNVIKMW 391
++ D +++W
Sbjct: 245 ITGSEDGTVRIW 256
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKLKG 178
IWN+ G + + H + + + G +L TG+ D+T VWD T + ++ L G
Sbjct: 169 IWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDG 227
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDA 274
H + V++V P ++++ S+D T+++W A
Sbjct: 228 HTHNVSAVCFHPELP-IIITGSEDGTVRIWHA 258
Score = 42.7 bits (96), Expect = 1e-04
Identities = 31/102 (30%), Positives = 47/102 (46%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W+ Y V + GHT + +CF P+ + TG+ D TV +W T L
Sbjct: 213 VWD-YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS 310
V ++ G + +V D+ TI + R+ PVAS DSS
Sbjct: 272 ERVWAI-GYIKSSRRVVIGYDEGTIMVKLGRE-IPVASMDSS 311
Score = 30.3 bits (65), Expect = 0.80
Identities = 26/119 (21%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +2
Query: 164 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFND 340
+K + V SV P +L S T+ +W+ + + SF+ + PV S F
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYS-GTVCIWNYQTQTITKSFEVTELPVRSAKFIP 67
Query: 341 TAEKILSSGVDNVIKMWDIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ +++ D I++++ N +K+ + H+D + +++ Y+LS+S D +++
Sbjct: 68 RKQWVVAGADDMYIRVYNY-NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKL 125
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 62.9 bits (146), Expect = 1e-10
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGA--IMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLK 175
+WN+ G + V KGH + I++ CF + + +G+ D+ V +W TG I +L
Sbjct: 469 LWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELP 528
Query: 176 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 286
GHA VN VS + +L SASDD TI++W + N
Sbjct: 529 GHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRIN 565
Score = 52.4 bits (120), Expect = 2e-07
Identities = 35/167 (20%), Positives = 77/167 (46%), Gaps = 5/167 (2%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNS 199
+ +++ HT + L FS +G +L + + D T +W++ I L GH V +
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 200 VSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS--YPVTSVLFNDTAEKILSSGVD 373
+ + ++L +++ I+ WD + V ++ P++ + D + I++ D
Sbjct: 325 ILWSPDDRQVLTCGAEE-VIRRWDVDSGDCVHMYEKGGISPISCGWYPD-GQGIIAGMTD 382
Query: 374 NVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
I MWD+ + T V+ ++++ DG +L+S D+ + +
Sbjct: 383 RSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISL 429
Score = 51.2 bits (117), Expect = 4e-07
Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Frame = +2
Query: 2 LIWNVY--GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL- 172
+IW + G + GH ++ + +SPD + T + + WDV +G +
Sbjct: 299 IIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYE 358
Query: 173 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVA-SFDSSYPVTSVLFNDTAE 349
KG + ++ G + +++ D +I +WD R + V+ + D +
Sbjct: 359 KGGISPISC--GWYPDGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGK 416
Query: 350 KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
++S D+VI ++D R + I+ D +T SLS D Y+L N ++ +R+
Sbjct: 417 WLVSVCKDSVISLFD-REATVERLIE-EEDMITSFSLSNDNKYILVNLLNQEIRL 469
Score = 31.5 bits (68), Expect = 0.35
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 323 SVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDN 502
S +F++T + LS D+ I + + ++ HTD V L S +G YL S+S D
Sbjct: 238 SCVFHNTLDSDLSLYSDHQCGKHQIPSQTAQI-LESHTDEVWFLQFSHNGKYLASSSKDQ 296
Query: 503 T 505
T
Sbjct: 297 T 297
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 62.1 bits (144), Expect = 2e-10
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG-HANFVNSVSGARRG 220
+KGHT I + ++ HL + + + V ++ +G R +LK + + + +R
Sbjct: 131 LKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLLDYSRSS 190
Query: 221 PELLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSS-GVDNVIKMW 391
LLV+A DD T+ LWD R+P S+ S P V F+ + EKI++S G+D + +
Sbjct: 191 RHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKKLYTY 250
Query: 392 D 394
D
Sbjct: 251 D 251
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Frame = +2
Query: 227 LLVSASDDNTIKLWDARKRN----PVASFDSSYP----VTSVLFNDTAEK-ILSSGVDNV 379
++ S +D I LW ++ PV D ++++ F+ + I S G +
Sbjct: 57 VVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQI 116
Query: 380 IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
+K+WD++ K+KGHT T+TG+ + +L S S+ L
Sbjct: 117 VKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDL 159
Score = 42.3 bits (95), Expect = 2e-04
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 11/179 (6%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGA------IMQLCFSPDGS-HLYTGATDNTVAVWDVPTGTRI 163
+W GQ + + G G + + FS GS ++ +G T V +WD+ I
Sbjct: 69 LWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCI 128
Query: 164 KKLKGHANFVNSVSGARRGPELL-VSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFND 340
KKLKGH + + V + L VS D + + R + + + ++
Sbjct: 129 KKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLLDYSR 188
Query: 341 TAEKIL-SSGVDNVIKMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSN-SMDNTL 508
++ +L ++G D + +WD + +K H+ G+ S ++++ MD L
Sbjct: 189 SSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKKL 247
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 4/145 (2%)
Frame = +2
Query: 44 MKGHTGAIMQLC-FSPDGSHLY-TGATDNTVAVWDVP-TGTRIKKLKGHANFVNSVSGAR 214
+K G +++L +S HL T D TV +WD ++ LK H+ V +
Sbjct: 173 LKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSP 232
Query: 215 RGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
+++ S D + +D+ R + P +S+ F D +++ + + +D
Sbjct: 233 SNEKIIASVGMDKKLYTYDSGSRRSSSCIAYEAPFSSLAFGDNGYILVAGTSNGRVVFYD 292
Query: 395 IRNN-QISLKIKGHTDTVTGLSLSW 466
IR Q + +++ SLSW
Sbjct: 293 IRGKPQPVTVLHAFSNSEDVTSLSW 317
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 62.1 bits (144), Expect = 2e-10
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 6/176 (3%)
Frame = +2
Query: 5 IWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IW+ GQC V+ + G G C +G L G N V W++ + L G
Sbjct: 170 IWDCASGQCTGVLNLGGEVG-----CIISEGPWLLVGMP-NLVKAWNIQNNADLS-LNGP 222
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS-----YPVTSVLFNDTA 346
V S+ G +LL + + D +I +W R + + FD + + + V A
Sbjct: 223 VGQVYSLVV---GTDLLFAGTQDGSILVW--RYNSTTSCFDPAASLLGHTLAVVSLYVGA 277
Query: 347 EKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
++ S +DN IK+W + N Q + HT V L + WD +LLS S+DNT++I
Sbjct: 278 NRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSL-ICWD-QFLLSCSLDNTVKI 331
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/75 (36%), Positives = 41/75 (54%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
GHT A++ L + LY+GA DN++ VW + I+ L H + V S+ +
Sbjct: 265 GHTLAVVSLYVG--ANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLIC---WDQF 319
Query: 230 LVSASDDNTIKLWDA 274
L+S S DNT+K+W A
Sbjct: 320 LLSCSLDNTVKIWAA 334
Score = 45.2 bits (102), Expect = 3e-05
Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 7/164 (4%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARR 217
+ GH + + LYT + D TV +WD +G T + L G + S
Sbjct: 140 LDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCIIS-----E 194
Query: 218 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGV-DNVIKMWD 394
GP LLV N +K W+ + A + PV V +L +G D I +W
Sbjct: 195 GPWLLVGM--PNLVKAWNIQNN---ADLSLNGPVGQVYSLVVGTDLLFAGTQDGSILVWR 249
Query: 395 IRNN----QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ + + GHT V L + + Y S +MDN++++
Sbjct: 250 YNSTTSCFDPAASLLGHTLAVVSLYVGANRLY--SGAMDNSIKV 291
Score = 39.5 bits (88), Expect = 0.001
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Frame = +2
Query: 8 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRI----KKLK 175
WN+ + + + G G + L D L+ G D ++ VW + T L
Sbjct: 209 WNIQNNAD--LSLNGPVGQVYSLVVGTD--LLFAGTQDGSILVWRYNSTTSCFDPAASLL 264
Query: 176 GHANFVNSVS-GARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAE 349
GH V S+ GA R L S + DN+IK+W + + + + V S++ D +
Sbjct: 265 GHTLAVVSLYVGANR----LYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWD--Q 318
Query: 350 KILSSGVDNVIKMW 391
+LS +DN +K+W
Sbjct: 319 FLLSCSLDNTVKIW 332
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 62.1 bits (144), Expect = 2e-10
Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR--IKKLKGHANFVNSVSGARRGPELLVS 238
+ +L +PD H A + + ++DV + + + H N V +V G + + + S
Sbjct: 38 VNRLEITPD-KHYLAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAV-GFQCDAKWMYS 95
Query: 239 ASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISL 418
S+D T+K+WD R ++S V +V+ + +++S + I++WD+R N S
Sbjct: 96 GSEDGTVKIWDLRAPGCQKEYESVAAVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSC 155
Query: 419 KIKGHTDT-VTGLSLSWDGAYLLS 487
++ DT V L++ WDG +++
Sbjct: 156 ELVPEVDTAVRSLTVMWDGTMVVA 179
Score = 50.4 bits (115), Expect = 7e-07
Identities = 29/93 (31%), Positives = 44/93 (47%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
++ H G I++ SP +L T ++D TV +W+V K L GH +V + G
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDG- 265
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVT 322
E LV+AS D T +LW V + + T
Sbjct: 266 EFLVTASSDMTARLWSMPAGKEVKVYQGHHKAT 298
Score = 48.0 bits (109), Expect = 4e-06
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 11/171 (6%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR 214
VM HT +M + F D +Y+G+ D TV +WD+ K+ + A VN+V
Sbjct: 71 VMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVA-AVNTVVLHP 129
Query: 215 RGPELLVSASDDNTIKLWDARKRN----PVASFDSSYPVTSVLFNDTAEKILSSGVDNVI 382
E L+S + I++WD R + V D++ +V+++ T ++++
Sbjct: 130 NQTE-LISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGT--MVVAANNRGTC 186
Query: 383 KMWDIRNNQISL-------KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+W + + ++ K++ H + LS YL + S D T++I
Sbjct: 187 YVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKI 237
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IWNV G + V+ GH + FS DG L T ++D T +W +P G +K +GH
Sbjct: 237 IWNVDG-FKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGH 294
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/160 (20%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Frame = +2
Query: 62 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELLVS 238
A+ + P+ + L +G + + VWD+ + +L + V S++ G ++V+
Sbjct: 121 AVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGT-MVVA 179
Query: 239 ASDDNTIKLWDA-RKRNPVASFDSSYP-------VTSVLFNDTAEKILSSGVDNVIKMWD 394
A++ T +W R + + F+ + + L + + + ++ D +K+W+
Sbjct: 180 ANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWN 239
Query: 395 IRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ ++ + GH V S DG +L++ S D T R+
Sbjct: 240 VDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARL 279
Score = 39.5 bits (88), Expect = 0.001
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Frame = +2
Query: 101 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 280
L T + D+T+ W+ TG + ++ + VN + L +A + + I+L+D
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLE-ITPDKHYLAAACNPH-IRLFDVNS 65
Query: 281 RN--PVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 400
+ PV ++DS + V +V F A+ + S D +K+WD+R
Sbjct: 66 NSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLR 108
Score = 38.3 bits (85), Expect = 0.003
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = +2
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSV-LFNDTAEK-ILSSGVDNVIKMWDIR 400
+L +AS D+TI+ W+A + YP + V T +K L++ + I+++D+
Sbjct: 7 ILATASYDHTIRFWEAETGRCYRTI--QYPDSHVNRLEITPDKHYLAAACNPHIRLFDVN 64
Query: 401 NN--QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+N Q + HT+ V + D ++ S S D T++I
Sbjct: 65 SNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKI 104
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 61.7 bits (143), Expect = 3e-10
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 244
++ + +SP+G L G+ D T+ V+DV + +L+GH V S+ + P +L S S
Sbjct: 161 VLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGS 220
Query: 245 DDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLK 421
DD + + DA + + S V SV + I + D +++WD++
Sbjct: 221 DDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQT 280
Query: 422 IKGHTDTV 445
+ H D V
Sbjct: 281 MSNHNDQV 288
Score = 52.8 bits (121), Expect = 1e-07
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV------- 202
M GHT ++ + SPDG + TG++D TV +WD+ I+ + H + V SV
Sbjct: 239 MSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGG 298
Query: 203 SGARRGPELLVSASDDNTIKLWD 271
+G R G L S SDD ++ L+D
Sbjct: 299 TGVRAG--RLASVSDDKSVSLYD 319
Score = 48.0 bits (109), Expect = 4e-06
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 16/176 (9%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHL-YTGATDNTVAVWDVPTGTRIKKLK------------ 175
+ V++ + + F P G+ L G + +V +WD + I L
Sbjct: 95 IAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDK 154
Query: 176 -GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAE 349
FV SV+ + G L S D TI ++D + + + + PV S++F+
Sbjct: 155 TSSKKFVLSVAWSPNGKRL-ACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDP 213
Query: 350 KILSSGVDNV-IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
++L SG D+ + M D + + GHT V + S DG + + S D T+R+
Sbjct: 214 RVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRL 269
Score = 44.4 bits (100), Expect = 5e-05
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
GH+ + L P G + + D+ V V+DV T I L+ + V + +G L
Sbjct: 58 GHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTIL 117
Query: 230 LVSASDDNTIKLWDARKRNPVASFDSSYP--------------VTSVLFNDTAEKILSSG 367
V+ ++KLWD +++ P V SV ++ +++
Sbjct: 118 AVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGS 177
Query: 368 VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMD 499
+D I ++D+ +++ +++GH V L S D L S S D
Sbjct: 178 MDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDD 222
Score = 33.1 bits (72), Expect = 0.11
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 221 PELLVSASDDNTIKLWDARKRNPV-ASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 397
P LL++ S D T+KLW + + V + S V ++ + + SS +D+ ++++D+
Sbjct: 30 PALLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDV 89
Query: 398 RNNQISLKIKGHTDTVTGLSLSWDGAYL 481
N ++ V G+ G L
Sbjct: 90 DTNATIAVLEAPPSEVWGMQFEPKGTIL 117
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +2
Query: 101 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 280
L TG+ D TV +W ++ GH+ V +++ G + S+S D+ ++++D
Sbjct: 33 LLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSG-IIAASSSIDSFVRVFDVDT 91
Query: 281 RNPVASFDS-SYPVTSVLFNDTAEKI-LSSGVDNVIKMWD 394
+A ++ V + F + ++ G +K+WD
Sbjct: 92 NATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWD 131
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 208
+N+ ++GH A+ F G ++ TG+ D V +W + T + +GH + ++
Sbjct: 296 QNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAV 355
Query: 209 ARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFND---TAEKILSSGVDN 376
+ L+ SAS+D I++W P++ + VT++ F+ + ++LSS D
Sbjct: 356 SSNN-ALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDG 414
Query: 377 VIKMWDIRNNQ 409
++WD R +Q
Sbjct: 415 TCRIWDARYSQ 425
Score = 54.0 bits (124), Expect = 6e-08
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Frame = +2
Query: 161 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFN 337
IKKL+GH N V R G +++ SDD +K+W +AS +T + +
Sbjct: 298 IKKLRGHRNAVYCAIFDRSG-RYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVS 356
Query: 338 DTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGA---YLLSNSMDNTL 508
+ S+ D VI++W + + ++GHT VT ++ S A LLS+S D T
Sbjct: 357 SNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTC 416
Query: 509 RI 514
RI
Sbjct: 417 RI 418
Score = 31.5 bits (68), Expect = 0.35
Identities = 16/80 (20%), Positives = 33/80 (41%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 244
+ + +S D + D + VW+ G+ + L GH+ + P + +SA
Sbjct: 600 VNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAG 659
Query: 245 DDNTIKLWDARKRNPVASFD 304
D +WD + P+ ++
Sbjct: 660 YDGKTIIWDIWEGIPIKVYE 679
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 60.9 bits (141), Expect = 5e-10
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT-RIKKLKGHANFVNSVS 205
E V + GHT + + + P+ +Y+ + D++V WDV TG + G A +N+V
Sbjct: 263 EAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKA--LNTVD 319
Query: 206 GARRGPELLVSASDDNTIKLWDARKRN---PVASFDS-SYPVTSVLFNDTAE-KILSSGV 370
L+ + D +++WD RK PV F S S +++ ++ ++ +LS+
Sbjct: 320 VGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASY 379
Query: 371 DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D I +WD+R I H D V W G ++S D+ LRI
Sbjct: 380 DGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGESVVSGGADSNLRI 426
Score = 41.1 bits (92), Expect = 4e-04
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCF--SPDGSHLY--TGATDNTVAVW------DVPTG 154
+W+ G C +++ +GH+GAI + S D + T + D T+ ++ V +
Sbjct: 135 VWSSAGSCSHIL--EGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDST 192
Query: 155 TRI---KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTS 325
T++ K L+GH V SVS + G ++ S+S D TI LW+ N S S V
Sbjct: 193 TKVRAYKILRGHKASVQSVSAQKSG-NMVCSSSWDCTINLWNT---NESTSEGESVSVKK 248
Query: 326 VLFNDTAEKILSSG 367
N+ AE+ S G
Sbjct: 249 RKGNNQAEESQSEG 262
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 60.5 bits (140), Expect = 7e-10
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWD-------VPTGTRIKKLKGHANFVNSVSG 208
GHT + L +S G L +G DN V +WD PT + + + H V +++
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Query: 209 ARRGPELLVSAS--DDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--VDN 376
LL + D IK W+ + S ++ V S+L++ + ++LSS N
Sbjct: 276 CPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSKSERELLSSHGFTQN 335
Query: 377 VIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ +W + ++ GHT V ++ S DG + S + D TLR+
Sbjct: 336 QLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRL 381
Score = 47.6 bits (108), Expect = 5e-06
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK-G 178
+W+ G ++ + G + + ++ DG L G ++ V +WD + +++ L+ G
Sbjct: 116 LWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGG 175
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTAEK 352
H + V S++ +L + D I D R R+ + + V + ++++ +K
Sbjct: 176 HESRVGSLAW---NNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGKK 232
Query: 353 ILSSGVDNVIKMWDIRN 403
+ S G DNV+ +WD R+
Sbjct: 233 LASGGNDNVVHIWDHRS 249
Score = 33.5 bits (73), Expect = 0.086
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 145
+W Y + + GHT ++ + SPDG + + A D T+ +W+V
Sbjct: 339 LWK-YPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 384
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 60.5 bits (140), Expect = 7e-10
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
F PDG L TG + V +WDV + + K GH + S+S + G L +A D +
Sbjct: 362 FHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDG--V 419
Query: 260 KLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVD-NVIKMWDIR---NNQISLKI 424
+LWD RK +FD +P SV F+ + + + D V + ++ N +L
Sbjct: 420 RLWDLRKLKNFRTFD--FPDANSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLPD 477
Query: 425 KGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
T T + D Y+ SMD LRI
Sbjct: 478 LSGTGKATSVKFGLDSKYIAVGSMDRNLRI 507
Score = 51.6 bits (118), Expect = 3e-07
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG---TRIKKLKGHANFVNSVSGAR 214
+ GH+ + + F D + T ++D TV +W T LK H+ V +V+
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVT-VH 318
Query: 215 RGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVLFNDTAEKILSSGVDNVI 382
+ VSAS D+T +D +A ++ T+ F+ + + +++
Sbjct: 319 ATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIV 378
Query: 383 KMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMD 499
K+WD+++ K GH +T +S S +G +L + ++D
Sbjct: 379 KIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD 417
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Frame = +2
Query: 107 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 286
TG D T ++D P+G + L GH+ V S+ +L+++AS D T+++W +
Sbjct: 239 TGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFV-GDTDLVLTASSDKTVRIWGCSEDG 297
Query: 287 PVAS----FDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 397
S D S V +V + T + +S+ +D+ +D+
Sbjct: 298 NYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDL 338
Score = 34.3 bits (75), Expect = 0.049
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 353 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
I + G+D ++D + QI + GH+ VT + D +L+ S D T+RI
Sbjct: 237 IATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRI 290
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 60.1 bits (139), Expect = 9e-10
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 10/181 (5%)
Frame = +2
Query: 2 LIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
++W+V + E + H+G + + + + S T +TD+ + + + K GH
Sbjct: 390 VVWDVKAE-EWKQQFEFHSGPTLDVDWRNNVSFA-TSSTDSMIYLCKIGETRPAKTFTGH 447
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAE--- 349
VN V G LL S SDD+T K+W+ ++ V + + + ++ ++ T
Sbjct: 448 QGEVNCVKWDPTG-SLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTN 506
Query: 350 ------KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
+ S+ D+ +K+WD ++ GH + V L+ S +G Y+ S S+D ++
Sbjct: 507 NPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIH 566
Query: 512 I 514
I
Sbjct: 567 I 567
Score = 54.8 bits (126), Expect = 3e-08
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
IW + G E + + H G I L ++ G +L TG+ D T VWDV ++ + H+
Sbjct: 350 IWTLNG--ELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHS 407
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILS 361
V R ++S D+ I L + P +F V V ++ T + S
Sbjct: 408 GPTLDVDW--RNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLAS 465
Query: 362 SGVDNVIKMWDIRNNQISLKIKGHTDTV 445
D+ K+W+I+ + ++ HT +
Sbjct: 466 CSDDSTAKIWNIKQSTFVHDLREHTKEI 493
Score = 52.4 bits (120), Expect = 2e-07
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH---------LYTGATDNTVAVWDVPTGT 157
IWN+ Q V ++ HT I + +SP G L + + D+TV +WD G
Sbjct: 474 IWNIK-QSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGK 532
Query: 158 RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFN 337
+ GH V S++ + G E + S S D +I +W ++ V ++ + + V +N
Sbjct: 533 MLCSFNGHREPVYSLAFSPNG-EYIASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVCWN 591
Query: 338 DTAEKILSSGVDNVIKMWDIR 400
KI + DN + + D R
Sbjct: 592 KEGNKIAACFADNSVCVLDFR 612
Score = 48.4 bits (110), Expect = 3e-06
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT-------------RIKKL 172
+V +++GHT + +SP S L +G+ D T +W +P G+ +K
Sbjct: 257 DVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHA 316
Query: 173 KGHAN----FVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFND 340
KG +N V ++ G LL + S D ++W P+ S+ +N
Sbjct: 317 KGKSNEKSKDVTTLDWNGEG-TLLATGSCDGQARIWTLNGELISTLSKHKGPIFSLKWNK 375
Query: 341 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSW 466
+ +L+ VD +WD++ + + + H+ L + W
Sbjct: 376 KGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPT--LDVDW 415
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 60.1 bits (139), Expect = 9e-10
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
Frame = +2
Query: 23 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 202
Q ++V + GH + L +S D L +G DN + VW+ + + K H V ++
Sbjct: 324 QEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAI 383
Query: 203 SGARRGPELLVS--ASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--V 370
+ + LL S + D I+ W+ ++S D+ V ++ ++ +++S+
Sbjct: 384 AWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVCNLAWSKNVNELVSTHGYS 443
Query: 371 DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
N I +W + GHT V L++S DG +++ + D TLR
Sbjct: 444 QNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLR 490
Score = 48.0 bits (109), Expect = 4e-06
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+WN + G ++ + ++ G+HL G + V +WD R + ++GH
Sbjct: 235 LWNACSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHR 294
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL 358
V +++ G +L S S D +I D R + S + + V + ++ ++
Sbjct: 295 LRVGALAW---GSSVLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELA 351
Query: 359 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS 463
S G DN + +W+ + Q LK HT V ++ S
Sbjct: 352 SGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWS 386
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 2 LIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 145
++W Y + + GHT ++ L SPDG + TGA D T+ W+V
Sbjct: 448 IVWK-YPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/98 (27%), Positives = 49/98 (50%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W++ N+++ +GH ++ + FSP+G HL +G DN +WD+ + + H
Sbjct: 156 VWDLR-TARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHV 214
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 298
N V+ V + L +AS D + +W R + V S
Sbjct: 215 NLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKS 252
Score = 55.2 bits (127), Expect = 2e-08
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 1/145 (0%)
Frame = +2
Query: 83 SPDGSHLYTGATDNTVAVWDVPTGT-RIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
S DG L T + +W+VP T +I LKGH V V + E L +AS D T
Sbjct: 72 SRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTE 131
Query: 260 KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTD 439
K+W D + T F SSG D++ ++WD+R + L +GH
Sbjct: 132 KIWKT---------DGTLLQT---FK------ASSGFDSLARVWDLRTARNILIFQGHIK 173
Query: 440 TVTGLSLSWDGAYLLSNSMDNTLRI 514
V + S +G +L S DN RI
Sbjct: 174 QVLSVDFSPNGYHLASGGEDNQCRI 198
Score = 52.0 bits (119), Expect = 2e-07
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
+W V ++V+KGH + + FS D L T +TD T +W GT ++ K
Sbjct: 89 LWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKTD-GTLLQTFKAS 147
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKIL 358
+ F D+ ++WD R + F V SV F+ +
Sbjct: 148 SGF-------------------DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLA 188
Query: 359 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNS 493
S G DN ++WD+R ++ I H + V+ + Y L+ +
Sbjct: 189 SGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATA 233
Score = 47.6 bits (108), Expect = 5e-06
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +2
Query: 119 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 298
D+ VWD+ T I +GH V SV + G L S +DN ++WD R R +
Sbjct: 151 DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYH-LASGGEDNQCRIWDLRMRKLLYI 209
Query: 299 FDSSYPVTSVLFNDTAEK--ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDG 472
+ + S + + E+ + ++ D + +W R+ + + GH V L ++ D
Sbjct: 210 IPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLDIAVDS 269
Query: 473 A 475
+
Sbjct: 270 S 270
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 202
++ H + Q+ + P + L T + D V +W + +K L GH + V S+
Sbjct: 209 IIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASL 263
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 59.3 bits (137), Expect = 2e-09
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Frame = +2
Query: 23 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 202
Q ++V +KGH I L +S D L +G DN + VW+ + + + HA V ++
Sbjct: 281 QEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAI 340
Query: 203 SGARRGPELLVS--ASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--V 370
+ + LL S + D I+ W+ + D++ V +++++ +++S+
Sbjct: 341 AWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYS 400
Query: 371 DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
N I +W + GH+ V L++S DG +++ + D TLR
Sbjct: 401 QNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLR 447
Score = 45.6 bits (103), Expect = 2e-05
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+WN + G + + ++ G+HL G + TV +WDV I+ ++GH
Sbjct: 192 LWNACSSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHR 251
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL 358
V +++ + +L S S D +I D R + S + + + ++ ++
Sbjct: 252 LRVGALAWS---SSVLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELA 308
Query: 359 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS 463
S G DN + +W+ + Q L+ H V ++ S
Sbjct: 309 SGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWS 343
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 2 LIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 145
++W Y + + GH+ ++ L SPDG + TGA D T+ W+V
Sbjct: 405 IVWK-YPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 59.3 bits (137), Expect = 2e-09
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Frame = +2
Query: 95 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 274
++L + D V +WDV TG I H SV + P L S SDD ++KLW+
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNI 826
Query: 275 RKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQISLKI-KGHTDTVT 448
+RN + + + V V F+ + +L+ G D +D+RN + I GH V+
Sbjct: 827 NERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVS 886
Query: 449 GLSLSWDGAYLLSNSMDNTLRI 514
+ D L++ S DNTL++
Sbjct: 887 -YAKFLDNETLVTASTDNTLKL 907
Score = 41.9 bits (94), Expect = 2e-04
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 10/144 (6%)
Frame = +2
Query: 101 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 280
L +G+ D +V +W++ + ++ AN V V + + LL S D +D R
Sbjct: 812 LASGSDDCSVKLWNINERNCLGTIRNIAN-VCCVQFSPQSSHLLAFGSSDFRTYCYDLRN 870
Query: 281 -RNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIR--------NNQISLKIKG 430
R P + V+ F D E ++++ DN +K+WD++ N SL G
Sbjct: 871 LRTPWCILSGHNKAVSYAKFLDN-ETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGG 929
Query: 431 HTDTVTGLSLSWDGAYLLSNSMDN 502
HT+ + LS Y+ S N
Sbjct: 930 HTNEKNFVGLSTSDGYIACGSETN 953
Score = 38.3 bits (85), Expect = 0.003
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 80 FSPDGSHLYT-GATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 253
FSP SHL G++D +D+ T L GH V+ E LV+AS DN
Sbjct: 846 FSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDN--ETLVTASTDN 903
Query: 254 TIKLWDARK 280
T+KLWD +K
Sbjct: 904 TLKLWDLKK 912
Score = 30.7 bits (66), Expect = 0.61
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 157
++ GH A+ F D L T +TDNT+ +WD+ T
Sbjct: 877 ILSGHNKAVSYAKFL-DNETLVTASTDNTLKLWDLKKTT 914
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 58.8 bits (136), Expect = 2e-09
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H G + + F +G D + VW+ T + L GH +++ +V P +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENP-WI 108
Query: 233 VSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDI 397
VSASDD TI++W+ + R ++ ++ V F+ + ++S+ +D +++WDI
Sbjct: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 57.2 bits (132), Expect = 6e-09
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIKKLKGHANFVNSVSGAR 214
V++GH + F P + +GA D V +W + + L+GH N V+SV
Sbjct: 199 VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 215 RGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
+ +++VS S+D +I++WDA KR + +F + +L +L++G DN + ++
Sbjct: 259 K-QDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINLLAAGHDNGMIVFK 317
Query: 395 IRNNQISLKIKG 430
+ + + + G
Sbjct: 318 LERERPAFALSG 329
Score = 54.4 bits (125), Expect = 4e-08
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = +2
Query: 161 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFN 337
+ K + +N V +S + P +L S I+LWD R + FD PV V F+
Sbjct: 2 LTKFETKSNRVKGLSFHPKRPWILASLHS-GVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 338 DTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
++ +S G D IK+W+ + ++ + GH D + + + +++S S D T+RI
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRI 119
Score = 50.0 bits (114), Expect = 9e-07
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 1/148 (0%)
Frame = +2
Query: 74 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 253
L F P + + +WD GT I + H V V P L VS DD
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP-LFVSGGDDY 73
Query: 254 TIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKG 430
IK+W+ + + + + +V F+ I+S+ D I++W+ ++ + G
Sbjct: 74 KIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTG 133
Query: 431 HTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
H V S ++S S+D T+R+
Sbjct: 134 HNHYVMCASFHPKEDLVVSASLDQTVRV 161
Score = 49.2 bits (112), Expect = 2e-06
Identities = 33/127 (25%), Positives = 58/127 (45%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+WN Y + + GH I + F + + + + D T+ +W+ + T I L GH
Sbjct: 77 VWN-YKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHN 135
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 364
++V S + +L+VSAS D T+++WD S+ P ++ L
Sbjct: 136 HYVMCASFHPK-EDLVVSASLDQTVRVWDI----GALKKKSASPADDLMRFSQMNSDLFG 190
Query: 365 GVDNVIK 385
GVD ++K
Sbjct: 191 GVDAIVK 197
Score = 36.7 bits (81), Expect = 0.009
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 2/172 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
IWN + + V+ GH +M F P + + + D TV VWD+ G KK A
Sbjct: 119 IWNWQSRT-CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALKKKSASPA 175
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 364
+ + S + +L DA + + D V F+ T I+S
Sbjct: 176 DDLMRFS--QMNSDLFGGV---------DAIVKYVLEGHDRG--VNWASFHPTLPLIVSG 222
Query: 365 GVDNVIKMWDIRNNQISL--KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D +K+W + + ++GH + V+ + ++SNS D ++R+
Sbjct: 223 ADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRV 274
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 58.4 bits (135), Expect = 3e-09
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 5/175 (2%)
Frame = +2
Query: 5 IWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
+W+ GQC V+ + G G ++ +G L G N V W++ T + L G
Sbjct: 177 VWDCASGQCTGVLKLGGEIGCVLS-----EGPWLLVGMP-NLVKAWNIETNAD-QSLSGP 229
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN----PVASFDSSYPVTSVLFNDTAE 349
V S+ G +LL + + D +I W P AS + + + V A
Sbjct: 230 VGQVYSLVV---GTDLLFAGTQDGSILAWRYNAATNCFEPSASL-TGHTLAVVTLYVGAN 285
Query: 350 KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
++ S +D IK+W + N Q + H+ V L + WD +LLS S+DNT++I
Sbjct: 286 RLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSL-ICWD-QFLLSCSLDNTVKI 338
Score = 48.0 bits (109), Expect = 4e-06
Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 7/164 (4%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARR 217
+ GH + + LYTG+ D T+ VWD +G T + KL G V S
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVLS-----E 201
Query: 218 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGV-DNVIKMW- 391
GP LLV N +K W+ A S PV V +L +G D I W
Sbjct: 202 GPWLLVGM--PNLVKAWNIETN---ADQSLSGPVGQVYSLVVGTDLLFAGTQDGSILAWR 256
Query: 392 -DIRNN--QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ N + S + GHT V L + + Y S SMD T+++
Sbjct: 257 YNAATNCFEPSASLTGHTLAVVTLYVGANRLY--SGSMDKTIKV 298
Score = 44.4 bits (100), Expect = 5e-05
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
+ GHT A++ L + LY+G+ D T+ VW + I+ L H++ V S+
Sbjct: 270 LTGHTLAVVTLYVG--ANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLI---CWD 324
Query: 224 ELLVSASDDNTIKLWDA 274
+ L+S S DNT+K+W A
Sbjct: 325 QFLLSCSLDNTVKIWAA 341
Score = 39.1 bits (87), Expect = 0.002
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
Frame = +2
Query: 8 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRI----KKLK 175
WN+ + + G G + L D L+ G D ++ W T L
Sbjct: 216 WNIETNADQSL--SGPVGQVYSLVVGTD--LLFAGTQDGSILAWRYNAATNCFEPSASLT 271
Query: 176 GHANFVNSVS-GARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAE 349
GH V ++ GA R L S S D TIK+W + + D S V S++ D +
Sbjct: 272 GHTLAVVTLYVGANR----LYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWD--Q 325
Query: 350 KILSSGVDNVIKMW 391
+LS +DN +K+W
Sbjct: 326 FLLSCSLDNTVKIW 339
Score = 30.7 bits (66), Expect = 0.61
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +2
Query: 5 IWNVYG-QCENVMVMKGHTGAIMQL-CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 178
+W++ QC + + H+ +M L C+ L + + DNTV +W G ++
Sbjct: 298 VWSLDNLQC--IQTLTDHSSVVMSLICWD---QFLLSCSLDNTVKIWAAIEGGNLEVTYT 352
Query: 179 HA--NFVNSVSGAR--RGPELLVSASDDNTIKLWD 271
H + V ++ G +L+ A +DNT++L+D
Sbjct: 353 HKEEHGVLALCGVHDAEAKPVLLCACNDNTLRLYD 387
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 58.4 bits (135), Expect = 3e-09
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR--G 220
+GH G I L S + + + + D + VW +P G + L+GH V +++ + R
Sbjct: 284 RGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGS 343
Query: 221 PELLVSASDDNTIKLWDAR 277
P L+S+SDD T ++WDAR
Sbjct: 344 PYQLLSSSDDGTCRIWDAR 362
Score = 57.2 bits (132), Expect = 6e-09
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 208
+N+ ++GH A+ G ++ TG+ D V VW + T + +GH + ++
Sbjct: 236 QNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAV 295
Query: 209 ARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFN---DTAEKILSSGVDN 376
+ + SAS+D I++W PV+ + VT++ F+ + ++LSS D
Sbjct: 296 SSNN-IFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDG 354
Query: 377 VIKMWDIRNNQISLKI 424
++WD R Q + +I
Sbjct: 355 TCRIWDARGAQFAPRI 370
Score = 49.2 bits (112), Expect = 2e-06
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Frame = +2
Query: 161 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFN 337
IK+L+GH N V R G +++ SDD +K+W +AS +T + +
Sbjct: 238 IKRLRGHRNAVYCAILDRSG-RYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVS 296
Query: 338 DTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS---WDGAYLLSNSMDNTL 508
I S+ D VI++W + + ++GHT VT ++ S LLS+S D T
Sbjct: 297 SNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTC 356
Query: 509 RI 514
RI
Sbjct: 357 RI 358
Score = 37.1 bits (82), Expect = 0.007
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 244
+ + +S D + D + VW+ G+ + L GH + P + +SA
Sbjct: 547 VNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAG 606
Query: 245 DDNTIKLWDARKRNPVASFD-SSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 409
D +WD + P+ +D S Y + F+ I+ S D+V +++ + Q
Sbjct: 607 YDGKTIVWDIWEGIPIQIYDISHYKLVDGKFSPDGTSIILS--DDVGQLYILSTGQ 660
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 58.4 bits (135), Expect = 3e-09
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
HT +++ L ++ + ++ A+ D V VWDV TGT ++ H V +V+ PE+
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 230 LVSASDDNTIKLWDARKRNPVA-SFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRN 403
L+S S D T+ L D R+ + + V S+ ++ +E + S D +K +D+R
Sbjct: 292 LLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQ 351
Query: 404 NQI-------SLKIKGHTDTVTGLSLSWDGAYLL-SNSMDNTLRI 514
I S I GH + T +S + LL + S D T+++
Sbjct: 352 ASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKL 396
Score = 44.4 bits (100), Expect = 5e-05
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 14/175 (8%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKG 178
+W+V G C+ + M+ HT + + ++ L +G+ D TV + D +
Sbjct: 260 VWDVATGTCK--ITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDGRQPSHSGFKWS 317
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPV-------TSVLF 334
+ V S++ V + +D T+K +D R+ + AS + S+ + TSV +
Sbjct: 318 VMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSFTINGHDEAATSVSY 377
Query: 335 NDTAEKILSSGV-DNVIKMWDIRNNQISLKIKGHTDTVTGL---SLSWDGAYLLS 487
N +A +L++G D +K+WD+ NN+ S I H GL + S D +LL+
Sbjct: 378 NISAPNLLATGSKDRTVKLWDLSNNEPSC-IATHNPNAGGLFFIAFSPDNPFLLA 431
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +2
Query: 170 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP--VASFD-SSYPVTSVLFN- 337
+ GH SVS P LL + S D T+KLWD P +A+ + ++ + + F+
Sbjct: 365 INGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSP 424
Query: 338 DTAEKILSSGVDNVIKMWD 394
D + GV +K+WD
Sbjct: 425 DNPFLLAMGGVMGELKLWD 443
Score = 29.1 bits (62), Expect = 1.9
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Frame = +2
Query: 167 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD-ARKRNPVASFDSSYPVTSVLFNDT 343
K H V ++ + +L SAS D +K+WD A + + V +V +N
Sbjct: 228 KQGSHTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHY 287
Query: 344 AEKILSSG-VDNVIKMWDIRN-NQISLKIKGHTDTVTGLSLSWD 469
A ++L SG D + + D R + K +D SL+WD
Sbjct: 288 APEVLLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVE---SLAWD 328
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 58.0 bits (134), Expect = 4e-09
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWD------VPTGTRIKKLKGHANFVNSVSGA 211
GHT + L +S G L +G DN V +WD PT + + + H V +++
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 212 RRGPELLVSAS--DDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--VDNV 379
LL + D I W+ + S ++ V S+L++ + ++LS+ N
Sbjct: 294 PFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQ 353
Query: 380 IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ +W + ++ GHT V ++ S DG + S + D TLR+
Sbjct: 354 LTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRL 398
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK-GHANFVNSVSGA 211
++ + G + + ++ DG L G ++ V VWD + ++ L+ GH + V S++
Sbjct: 145 LVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAW- 203
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTAEKILSSGVDNVIK 385
+L + D I D R R+ + + V + ++++ +K+ S G DNV+
Sbjct: 204 --NNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVH 261
Query: 386 MWD 394
+WD
Sbjct: 262 IWD 264
Score = 38.7 bits (86), Expect = 0.002
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = +2
Query: 224 ELLVSASDDNTIKLWDARK---RNPVASFDSSYPVTSVLFNDTAEKI-LSSGVDN-VIKM 388
E +V +T+ LWDA V D + PVTS+ N T + + L+ G+DN +++
Sbjct: 121 EYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSI--NWTQDGLDLAVGLDNSEVQV 178
Query: 389 WDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
WD +N+ ++G ++ G SL+W+ L + MD +
Sbjct: 179 WDCVSNRHVRTLRGGHESRVG-SLAWNNHILTTGGMDGKI 217
Score = 33.5 bits (73), Expect = 0.086
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 145
+W Y + + GHT ++ + SPDG + + A D T+ +W+V
Sbjct: 356 LWK-YPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 401
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 40.7 bits (91), Expect(2) = 4e-09
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 145
V + GH G I L FSPDG +L TG D V +W +
Sbjct: 191 VQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRI 227
Score = 37.5 bits (83), Expect = 0.005
Identities = 25/121 (20%), Positives = 48/121 (39%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
GHTG ++ L +S D + L + + D TV +W + H N+V V
Sbjct: 270 GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNN 327
Query: 230 LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 409
S S D ++W + VA D ++++ + + + + + I +N
Sbjct: 328 FASGSIDGKARIWGLSEERVVAWTDVRDSISAISYQPNGNGFVVGCITGNCRFYQILDND 387
Query: 410 I 412
+
Sbjct: 388 V 388
Score = 36.7 bits (81), Expect(2) = 4e-09
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 155 TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF 334
T ++L GH V ++ + LL+SAS D T++LW + F + VT V F
Sbjct: 263 TPFQELYGHTGDVLDLAWS--DSNLLLSASKDKTVRLWRTGCDQCLHVFHHNNYVTCVEF 320
Query: 335 NDTAEKILSSG-VDNVIKMWDIRNNQI 412
N + +SG +D ++W + ++
Sbjct: 321 NPVNKNNFASGSIDGKARIWGLSEERV 347
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 419 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
KI GH + L S DG YL + D ++I
Sbjct: 193 KINGHKGKIWTLKFSPDGKYLATGGEDGVVKI 224
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 57.6 bits (133), Expect = 5e-09
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKL-----KGHANFVNSV 202
++ GH G + + P + +HL T + D T +WDV TG + GH V SV
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 210
Query: 203 SGARRGPELLVSASDDNTIKLWDARKRN-PVASFDS-SYPVTSVLFNDTAEKILSSGVDN 376
S + P +S S D+T +LWD R + V +F V +V F + + D
Sbjct: 211 SISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDG 270
Query: 377 VIKMWDIRNNQISLKIKGHTD----TVTGLSLSWDGAYLLSNSMDN 502
+++DIR + H D VT ++ S G L + N
Sbjct: 271 TCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASN 316
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W+ V GH G + + F PDG TG+ D T ++D+ TG +++ + H
Sbjct: 231 LWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHG 290
Query: 185 NF----VNSVSGARRGPELLVSASDDNTIKLWD 271
+ V S++ + G L + +NT +WD
Sbjct: 291 DGENGPVTSIAFSVSGRLLFAGYASNNTCYVWD 323
Score = 43.6 bits (98), Expect = 8e-05
Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 15/186 (8%)
Frame = +2
Query: 2 LIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-----GTR-- 160
++WN + +K +M FSP+G + G D+ +++ + + GT
Sbjct: 90 IVWNALTS-QKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPV 148
Query: 161 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY------PVT 322
+ L GH +V+ L+++S D T LWD + F + V
Sbjct: 149 SRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVL 208
Query: 323 SV-LFNDTAEKILSSGVDNVIKMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSNSM 496
SV + +S D+ ++WD R +++ GH V + DG + S
Sbjct: 209 SVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSD 268
Query: 497 DNTLRI 514
D T R+
Sbjct: 269 DGTCRL 274
Score = 39.5 bits (88), Expect = 0.001
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 19/176 (10%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
++GHTG + L ++P+ + + + + D + VW+ T + +K +V + + + G
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF-------------NDTAEKILSS 364
+ D + + A D + PV+ +L N+ A I SS
Sbjct: 121 SVACGGLD----SVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSS 176
Query: 365 GVDNVIKMWDIRNNQISLKI-----KGHTDTVTGLSLSWDGA-YLLSNSMDNTLRI 514
G D +WD+ + GHT V +S+S + +S S D+T R+
Sbjct: 177 G-DQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARL 231
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 57.6 bits (133), Expect = 5e-09
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKL-----KGHANFVNSV 202
++ GH G + + P + +HL T + D T +WDV TG + GH V SV
Sbjct: 89 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 148
Query: 203 SGARRGPELLVSASDDNTIKLWDARKRN-PVASFDS-SYPVTSVLFNDTAEKILSSGVDN 376
S + P +S S D+T +LWD R + V +F V +V F + + D
Sbjct: 149 SISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDG 208
Query: 377 VIKMWDIRNNQISLKIKGHTD----TVTGLSLSWDGAYLLSNSMDN 502
+++DIR + H D VT ++ S G L + N
Sbjct: 209 TCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASN 254
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W+ V GH G + + F PDG TG+ D T ++D+ TG +++ + H
Sbjct: 169 LWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHG 228
Query: 185 NF----VNSVSGARRGPELLVSASDDNTIKLWD 271
+ V S++ + G L + +NT +WD
Sbjct: 229 DGENGPVTSIAFSVSGRLLFAGYASNNTCYVWD 261
Score = 43.6 bits (98), Expect = 8e-05
Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 15/186 (8%)
Frame = +2
Query: 2 LIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-----GTR-- 160
++WN + +K +M FSP+G + G D+ +++ + + GT
Sbjct: 28 IVWNALTS-QKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPV 86
Query: 161 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY------PVT 322
+ L GH +V+ L+++S D T LWD + F + V
Sbjct: 87 SRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVL 146
Query: 323 SV-LFNDTAEKILSSGVDNVIKMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSNSM 496
SV + +S D+ ++WD R +++ GH V + DG + S
Sbjct: 147 SVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSD 206
Query: 497 DNTLRI 514
D T R+
Sbjct: 207 DGTCRL 212
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVW 139
H I L S DGS L TG+ D+ + +W
Sbjct: 278 HRNRISCLGLSADGSALCTGSWDSNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 57.6 bits (133), Expect = 5e-09
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKL-----KGHANFVNSV 202
++ GH G + + P + +HL T + D T +WDV TG + GH V SV
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 210
Query: 203 SGARRGPELLVSASDDNTIKLWDARKRN-PVASFDS-SYPVTSVLFNDTAEKILSSGVDN 376
S + P +S S D+T +LWD R + V +F V +V F + + D
Sbjct: 211 SISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDG 270
Query: 377 VIKMWDIRNNQISLKIKGHTD----TVTGLSLSWDGAYLLSNSMDN 502
+++DIR + H D VT ++ S G L + N
Sbjct: 271 TCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASN 316
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W+ V GH G + + F PDG TG+ D T ++D+ TG +++ + H
Sbjct: 231 LWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHG 290
Query: 185 NF----VNSVSGARRGPELLVSASDDNTIKLWD 271
+ V S++ + G L + +NT +WD
Sbjct: 291 DGENGPVTSIAFSVSGRLLFAGYASNNTCYVWD 323
Score = 43.6 bits (98), Expect = 8e-05
Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 15/186 (8%)
Frame = +2
Query: 2 LIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-----GTR-- 160
++WN + +K +M FSP+G + G D+ +++ + + GT
Sbjct: 90 IVWNALTS-QKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPV 148
Query: 161 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY------PVT 322
+ L GH +V+ L+++S D T LWD + F + V
Sbjct: 149 SRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVL 208
Query: 323 SV-LFNDTAEKILSSGVDNVIKMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSNSM 496
SV + +S D+ ++WD R +++ GH V + DG + S
Sbjct: 209 SVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSD 268
Query: 497 DNTLRI 514
D T R+
Sbjct: 269 DGTCRL 274
Score = 39.5 bits (88), Expect = 0.001
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 19/176 (10%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
++GHTG + L ++P+ + + + + D + VW+ T + +K +V + + + G
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF-------------NDTAEKILSS 364
+ D + + A D + PV+ +L N+ A I SS
Sbjct: 121 SVACGGLD----SVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSS 176
Query: 365 GVDNVIKMWDIRNNQISLKI-----KGHTDTVTGLSLSWDGA-YLLSNSMDNTLRI 514
G D +WD+ + GHT V +S+S + +S S D+T R+
Sbjct: 177 G-DQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARL 231
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVW 139
H I L S DGS L TG+ D+ + +W
Sbjct: 340 HRNRISCLGLSADGSALCTGSWDSNLKIW 368
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 57.6 bits (133), Expect = 5e-09
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 17/179 (9%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 208
E + +GH GA+ S D S L TG+ D T +WDV +G + K +A SV
Sbjct: 43 ERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAP-TRSVDF 101
Query: 209 ARRGPELLVSASD---DNTIKL-----------WDARKRNPVASFDSSYPVTSVLFNDTA 346
A G L V +D D T + DA + D + ++
Sbjct: 102 A-VGDRLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLN 160
Query: 347 EKILSSGVDNVIKMWDIRNNQI---SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ I+S G D VI++WD ++ S + GH +T L + D ++ L+ S+D T ++
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Score = 54.0 bits (124), Expect = 6e-08
Identities = 30/99 (30%), Positives = 48/99 (48%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 217
++MKGH + L ++ +G L++ A D+T +W G R+ +GH N R
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGH-NGAVWCCDVSR 62
Query: 218 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF 334
L++ S D T KLWD + + +F + P SV F
Sbjct: 63 DSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDF 101
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 166
GH I LC + D SH TG+ D T +WD+ T T +K
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLK 229
Score = 32.7 bits (71), Expect = 0.15
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +2
Query: 287 PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSW 466
P+ P+T + +N + + S D+ +W N + +GH V +S
Sbjct: 3 PILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSR 62
Query: 467 DGAYLLSNSMDNTLRI 514
D + L++ S D T ++
Sbjct: 63 DSSRLITGSADQTAKL 78
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSY----PVTSVLFNDTAEKILSSGVDNVIKMW 391
+ +VS +D I++WDA + D +TS+ L+ +D K+W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 392 DIRNNQISLKIKGHTDTVTGLSLS 463
D+R + LK V +SLS
Sbjct: 221 DMRTLTL-LKTYTTVVPVNAVSLS 243
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 57.6 bits (133), Expect = 5e-09
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 17/179 (9%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 208
E + +GH GA+ S D S L TG+ D T +WDV +G + K +A SV
Sbjct: 43 ERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAP-TRSVDF 101
Query: 209 ARRGPELLVSASD---DNTIKL-----------WDARKRNPVASFDSSYPVTSVLFNDTA 346
A G L V +D D T + DA + D + ++
Sbjct: 102 A-VGDRLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLN 160
Query: 347 EKILSSGVDNVIKMWDIRNNQI---SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ I+S G D VI++WD ++ S + GH +T L + D ++ L+ S+D T ++
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Score = 54.0 bits (124), Expect = 6e-08
Identities = 30/99 (30%), Positives = 48/99 (48%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 217
++MKGH + L ++ +G L++ A D+T +W G R+ +GH N R
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGH-NGAVWCCDVSR 62
Query: 218 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF 334
L++ S D T KLWD + + +F + P SV F
Sbjct: 63 DSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDF 101
Score = 40.7 bits (91), Expect = 6e-04
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 14/139 (10%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
GH I LC + D SH TG+ D T +WD+ T T +K VN+VS + +
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVP-VNAVSLSPLLNHV 249
Query: 230 LVSASDDNT-------------IKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSG 367
++ D + K +D + + + P+ ++ FN + S G
Sbjct: 250 VLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGG 309
Query: 368 VDNVIKMWDIRNNQISLKI 424
D +++ ++ ++KI
Sbjct: 310 EDGYVRLHHFDSDYFNIKI 328
Score = 32.7 bits (71), Expect = 0.15
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +2
Query: 287 PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSW 466
P+ P+T + +N + + S D+ +W N + +GH V +S
Sbjct: 3 PILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSR 62
Query: 467 DGAYLLSNSMDNTLRI 514
D + L++ S D T ++
Sbjct: 63 DSSRLITGSADQTAKL 78
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSY----PVTSVLFNDTAEKILSSGVDNVIKMW 391
+ +VS +D I++WDA + D +TS+ L+ +D K+W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 392 DIRNNQISLKIKGHTDTVTGLSLS 463
D+R + LK V +SLS
Sbjct: 221 DMRTLTL-LKTYTTVVPVNAVSLS 243
Score = 31.1 bits (67), Expect = 0.46
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 130
E + +KGH G I L F+PDG +G D V
Sbjct: 281 EEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYV 314
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 57.6 bits (133), Expect = 5e-09
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 17/179 (9%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 208
E + +GH GA+ S D S L TG+ D T +WDV +G + K +A SV
Sbjct: 43 ERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAP-TRSVDF 101
Query: 209 ARRGPELLVSASD---DNTIKL-----------WDARKRNPVASFDSSYPVTSVLFNDTA 346
A G L V +D D T + DA + D + ++
Sbjct: 102 A-VGDRLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLN 160
Query: 347 EKILSSGVDNVIKMWDIRNNQI---SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ I+S G D VI++WD ++ S + GH +T L + D ++ L+ S+D T ++
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Score = 54.0 bits (124), Expect = 6e-08
Identities = 30/99 (30%), Positives = 48/99 (48%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 217
++MKGH + L ++ +G L++ A D+T +W G R+ +GH N R
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGH-NGAVWCCDVSR 62
Query: 218 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF 334
L++ S D T KLWD + + +F + P SV F
Sbjct: 63 DSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDF 101
Score = 40.7 bits (91), Expect = 6e-04
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 14/139 (10%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
GH I LC + D SH TG+ D T +WD+ T T +K VN+VS + +
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVP-VNAVSLSPLLNHV 249
Query: 230 LVSASDDNT-------------IKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSG 367
++ D + K +D + + + P+ ++ FN + S G
Sbjct: 250 VLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGG 309
Query: 368 VDNVIKMWDIRNNQISLKI 424
D +++ ++ ++KI
Sbjct: 310 EDGYVRLHHFDSDYFNIKI 328
Score = 32.7 bits (71), Expect = 0.15
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +2
Query: 287 PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSW 466
P+ P+T + +N + + S D+ +W N + +GH V +S
Sbjct: 3 PILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSR 62
Query: 467 DGAYLLSNSMDNTLRI 514
D + L++ S D T ++
Sbjct: 63 DSSRLITGSADQTAKL 78
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSY----PVTSVLFNDTAEKILSSGVDNVIKMW 391
+ +VS +D I++WDA + D +TS+ L+ +D K+W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 392 DIRNNQISLKIKGHTDTVTGLSLS 463
D+R + LK V +SLS
Sbjct: 221 DMRTLTL-LKTYTTVVPVNAVSLS 243
Score = 31.1 bits (67), Expect = 0.46
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 130
E + +KGH G I L F+PDG +G D V
Sbjct: 281 EEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYV 314
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 56.4 bits (130), Expect = 1e-08
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Frame = +2
Query: 26 CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR---IKKLKGHANFVN 196
C+ V+ + HT + +SP G L T + D T +W G+ I L+GH N V
Sbjct: 65 CKTVLE-ETHTRTVRSCAWSPSGQLLATASFDGTTGIWK-NYGSEFECISTLEGHENEVK 122
Query: 197 SVSGARRGPELLVSASDDNTIKLWDARKRN----PVASFDSSYPVTSVLFNDTAEKILSS 364
SVS G L + S D ++ +W+ + N + V V ++ T + + S
Sbjct: 123 SVSWNASG-SCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSC 181
Query: 365 GVDNVIKMWDIRNNQ--------ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
DN IK+W ++ + GH+ TV +S + G +++ S D TL+I
Sbjct: 182 SYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKI 239
Score = 52.4 bits (120), Expect = 2e-07
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Frame = +2
Query: 5 IWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR---IKKL 172
IW YG + E + ++GH + + ++ GS L T + D +V +W+V G L
Sbjct: 100 IWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVL 159
Query: 173 KGHANFVNSVSGARRGPELLVSASDDNTIKLW----DARKRNPVASFDS-----SYPVTS 325
GH V V ++L S S DNTIK+W D + V + S V S
Sbjct: 160 TGHTQDVKMVQW-HPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWS 218
Query: 326 VLFNDTAEKILSSGVDNVIKMW 391
+ FN +K+++ D +K+W
Sbjct: 219 ISFNAAGDKMVTCSDDLTLKIW 240
Score = 42.7 bits (96), Expect = 1e-04
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSH-------LYTGATDNTVAVWDVPTGTRIKKLK-----G 178
+ ++GHT + + ++P SH L + + DNTV +W+ + +R K
Sbjct: 13 IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDS-SYPVTSVLFNDTAE 349
H V S + + G +LL +AS D T +W + +++ + V SV +N +
Sbjct: 73 HTRTVRSCAWSPSG-QLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGS 131
Query: 350 KILSSGVDNVIKMWDI-RNNQ--ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ + D + +W++ N+ + + GHT V + L S S DNT+++
Sbjct: 132 CLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKV 189
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 161 IKKLKGHANFVNSVSGAR-RGPELLVSASDDNTIKLW 268
+KK K H N VNSV + G LL SASDD +K+W
Sbjct: 310 LKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIW 346
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 56.4 bits (130), Expect = 1e-08
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
H + + ++P + T + D+TV +W + ++ K HA V + ++
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDV 164
Query: 230 LVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKIL-SSGVDNVIKMWDIRN 403
SAS D T+++WD R+ + + + S +N + IL +S VD +K+WD+R+
Sbjct: 165 FASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRS 224
Query: 404 NQISLKI-KGHTDTVTGLSLS 463
++ L + GH V + S
Sbjct: 225 YRVPLAVLNGHGYAVRKVKFS 245
Score = 53.6 bits (123), Expect = 8e-08
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Frame = +2
Query: 62 AIMQLCFSPD-GSHLYTGATDNTVAVWDV---PTGTRIKKLKGHANFVNSVSGARRGPEL 229
A+ +C+S S L D +V ++D P I+ + HA V SV +
Sbjct: 62 AVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDS 121
Query: 230 LVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDT-AEKILSSGVDNVIKMWDIRN 403
+++S D+T+KLW + V +F + +Y V ++N + S+ D +++WD+R
Sbjct: 122 FLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE 181
Query: 404 NQISLKIKGHTDTVTGLSLSW---DGAYLLSNSMDNTLRI 514
++ I H + LS W D L ++S+D T+++
Sbjct: 182 PGSTMIIPAHDFEI--LSCDWNKYDDCILATSSVDKTVKV 219
Score = 40.3 bits (90), Expect = 8e-04
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPT-GTRIKKLKG 178
IW+V + + M++ H I+ ++ D L T + D TV VWDV + + L G
Sbjct: 176 IWDVR-EPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNG 234
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWD 271
H V V + L+ S S D ++ LWD
Sbjct: 235 HGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 56.4 bits (130), Expect = 1e-08
Identities = 34/136 (25%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSP---DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 208
+V GH+ ++ + +SP DG L + + D+ + + TG I +GH V S S
Sbjct: 5 LVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSL 64
Query: 209 ARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKM 388
+ SAS D T K+W+A + + SF+ + V + F++ ++L+ G++ ++++
Sbjct: 65 DKNAIRA-ASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHRLLTGGMEKILRI 123
Query: 389 WDIRNNQISLKIKGHT 436
+D+ K G++
Sbjct: 124 FDLNRPDAPPKEVGNS 139
Score = 46.8 bits (106), Expect = 9e-06
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA-NFVNSVSGARRGPEL 229
H + FS D L TG + + ++D+ K G++ + +V +
Sbjct: 96 HKHIVRACAFSEDTHRLLTGGMEKILRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTI 155
Query: 230 LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 403
L S +D I+LWD R V + ++ PVTS + I ++ +V K WD +N
Sbjct: 156 LSSCTDTGDIRLWDIRSDKIVHTLETKSPVTSAEVSQDGRYITTADGSSV-KFWDAKN 212
Score = 36.7 bits (81), Expect = 0.009
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 2/154 (1%)
Frame = +2
Query: 59 GAIMQLCFSPDGSHLYTGATDN-TVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 235
G+I + + + + + TD + +WD+ + + L+ + V S ++ G +
Sbjct: 141 GSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTLETKSP-VTSAEVSQDGR--YI 197
Query: 236 SASDDNTIKLWDARKRNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQI 412
+ +D +++K WDA+ + S+D V S L ++ G D + +D + +
Sbjct: 198 TTADGSSVKFWDAKNFGLLKSYDMPCNVESASLEPKHGNTFIAGGEDMWVHRFDFQTGEE 257
Query: 413 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
KGH V + + G S S D T+RI
Sbjct: 258 IGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRI 291
Score = 33.9 bits (74), Expect = 0.065
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +2
Query: 92 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 268
G+ G D V +D TG I KGH V+ V A G E S S+D T+++W
Sbjct: 235 GNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGG-ESYTSGSEDGTVRIW 292
Score = 33.1 bits (72), Expect = 0.11
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK--LKGHANFV 193
E + KGH G + + ++P G +G+ D TV +W V + ++ L GH V
Sbjct: 256 EEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEESNLSGHVKLV 312
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H G + + F +G D + VW+ + L GH +++ +V P +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYP-WI 108
Query: 233 VSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDI 397
VSASDD TI++W+ + R V+ ++ V F+ + ++S+ +D +++WDI
Sbjct: 109 VSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 55.6 bits (128), Expect = 2e-08
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +2
Query: 161 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFN 337
+ K + +N V +S + P +L S I+LWD R + FD PV V F+
Sbjct: 2 LTKFETKSNRVKGLSFHPKRPWILASLHS-GVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 338 DTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
++ +S G D IK+W+ +N++ + GH D + + + +++S S D T+RI
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
Score = 55.2 bits (127), Expect = 2e-08
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIKKLKGHANFVNSVSGAR 214
V++GH + F P + +GA D V +W + + L+GH N V+SV
Sbjct: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 215 RGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
+ +++VS S+D +I++WDA KR + +F + +L +L++G D+ + ++
Sbjct: 259 K-QDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLLAAGHDSGMIVFK 317
Query: 395 IRNNQISLKIKG 430
+ + + + G
Sbjct: 318 LERERPAFALSG 329
Score = 50.4 bits (115), Expect = 7e-07
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 1/148 (0%)
Frame = +2
Query: 74 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 253
L F P + + +WD GT I + H V V P L VS DD
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP-LFVSGGDDY 73
Query: 254 TIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKG 430
IK+W+ + + + + +V F+ I+S+ D I++W+ ++ + G
Sbjct: 74 KIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTG 133
Query: 431 HTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
H V S ++S S+D T+R+
Sbjct: 134 HNHYVMCASFHPKEDLVVSASLDQTVRV 161
Score = 48.8 bits (111), Expect = 2e-06
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+WN Y + + GH I + F + + + + D T+ +W+ + T + L GH
Sbjct: 77 VWN-YKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHN 135
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDSSYPVTSVLFNDTAEKIL 358
++V S + +L+VSAS D T+++WD A ++ V+ D +T + L
Sbjct: 136 HYVMCASFHPK-EDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQM------NSDL 188
Query: 359 SSGVDNVIK 385
GVD ++K
Sbjct: 189 FGGVDAIVK 197
Score = 37.9 bits (84), Expect = 0.004
Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 2/172 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
IWN + V V+ GH +M F P + + + D TV VWD+ G KK A
Sbjct: 119 IWNWQSRT-CVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPA 175
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 364
+ + + ++ + + DA + + D V F+ T I+S
Sbjct: 176 DDI-----------MRLTQMNSDLFGGVDAIVKYVLEGHDRG--VNWAAFHPTLPLIVSG 222
Query: 365 GVDNVIKMWDIRNNQI--SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D +K+W + + ++GH + V+ + ++SNS D ++R+
Sbjct: 223 ADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRV 274
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 55.6 bits (128), Expect = 2e-08
Identities = 28/79 (35%), Positives = 40/79 (50%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 226
K H+ + L S DG +L TG D V +WDV T ++ GH N V+ + R G
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLC-FRYGTS 277
Query: 227 LLVSASDDNTIKLWDARKR 283
L S S D T+K+W+ +
Sbjct: 278 ELYSGSFDRTVKVWNVEDK 296
Score = 48.8 bits (111), Expect = 2e-06
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 2/153 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
IW+V + E+V GH + LCF S LY+G+ D TV VW+V I + GH
Sbjct: 248 IWDVRTR-EHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQ 306
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS 364
+ ++ R+ E ++ D T+ + + + + S F E + S
Sbjct: 307 GEILAIDALRK--ERALTVGRDRTMLYHKVPESTRMIYRAPASSLESCCFISDNEYL--S 362
Query: 365 GVDN-VIKMWD-IRNNQISLKIKGHTDTVTGLS 457
G DN + +W ++ + + H D G++
Sbjct: 363 GSDNGTVALWGMLKKKPVFVFKNAHQDIPDGIT 395
Score = 42.3 bits (95), Expect = 2e-04
Identities = 36/158 (22%), Positives = 68/158 (43%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 220
V+ H +++ + S D S ++ + D T+ WDV +G K +
Sbjct: 156 VIVKHRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWP-------------S 202
Query: 221 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 400
E+L S + +KL + R +N S ++ + + + GVD + +WD+R
Sbjct: 203 DEILKS----HGMKLREPRNKN------HSRESLALAVSSDGRYLATGGVDRHVHIWDVR 252
Query: 401 NNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ GH +TV+ L + + L S S D T+++
Sbjct: 253 TREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKV 290
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 55.6 bits (128), Expect = 2e-08
Identities = 31/100 (31%), Positives = 49/100 (49%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 217
++MKGH + L ++ +G L++ A D+T VW G R+ +GH+ V R
Sbjct: 31 ILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAV-WCCDISR 89
Query: 218 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFN 337
L++ S D T KLWD + + +F P SV F+
Sbjct: 90 DSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFS 129
Score = 52.4 bits (120), Expect = 2e-07
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 15/177 (8%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK--GHANFVNSV 202
E + +GH+GA+ S D S L TG+ D T +WDV +G + K A V+
Sbjct: 70 ERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFS 129
Query: 203 SG---ARRGPELLVSASDDNTIKLWDARKRNPVA-------SFDSSYPVTSVLFNDTAEK 352
G A + V S +K + V S D + ++ +
Sbjct: 130 VGDHLAVITTDHFVGTSSAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQT 189
Query: 353 ILSSGVDNVIKMWDIRNNQI---SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
I+S G D I++WD ++ S + GH + +T L + D ++ L+ S D T ++
Sbjct: 190 IVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKL 246
Score = 43.2 bits (97), Expect = 1e-04
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
GH AI LC + D SH TG+ D T +WD+ T T IK VN+V+ + +
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVVP-VNAVAMSPLLNHV 276
Query: 230 LVSASDDNT-------------IKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSG 367
++ D + K +D + + + P+ ++ F+ + S G
Sbjct: 277 VLGGGQDASAVTTTDHRAGKFEAKFYDTILQEEIGGVKGHFGPINALAFSPDGKSFSSGG 336
Query: 368 VDNVIKMWDIRNNQISLKI 424
D +++ +N ++KI
Sbjct: 337 EDGYVRLHHFDSNYFNIKI 355
Score = 33.9 bits (74), Expect = 0.065
Identities = 17/79 (21%), Positives = 35/79 (44%)
Frame = +2
Query: 278 KRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLS 457
+ P+ P+T + +N + + S D+ +W N + +GH+ V
Sbjct: 27 RMRPILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCD 86
Query: 458 LSWDGAYLLSNSMDNTLRI 514
+S D + L++ S D T ++
Sbjct: 87 ISRDSSRLITGSADQTAKL 105
Score = 32.3 bits (70), Expect = 0.20
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 130
E + +KGH G I L FSPDG +G D V
Sbjct: 308 EEIGGVKGHFGPINALAFSPDGKSFSSGGEDGYV 341
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 55.6 bits (128), Expect = 2e-08
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 161 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFND 340
++ H V +V G ++ S S+D ++K+WD R R F S PV +V+ +
Sbjct: 77 VRNFVSHTKNVMAVGFQYTG-HMMYSGSEDGSVKIWDLRVRECQREFRSVSPVNTVVLHP 135
Query: 341 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDT-VTGLSLSWDGAYLLS 487
+++S + I++WD+R + S ++ T + L++ WDG +++
Sbjct: 136 NQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVA 185
Score = 50.0 bits (114), Expect = 9e-07
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
++ H I++ SP +L T ++D TV +W++ K L GH +V + G
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDG- 271
Query: 224 ELLVSASDDNTIKLWDAR 277
E LV+AS D T +LW R
Sbjct: 272 EYLVTASSDTTARLWSMR 289
Score = 41.9 bits (94), Expect = 2e-04
Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Frame = +2
Query: 86 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELLVSASDDNTIK 262
P+ + L +G + + VWD+ +L + S++ G ++V+A+D T
Sbjct: 135 PNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGT-MVVAANDRGTCY 193
Query: 263 LWDAR-KRNPVASFDSSYP-------VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISL 418
+W + +R + F+ + + L + + + ++ D +K+W++ ++
Sbjct: 194 VWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEK 253
Query: 419 KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ GH V S DG YL++ S D T R+
Sbjct: 254 VLTGHERWVWDCDFSMDGEYLVTASSDTTARL 285
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL- 229
HT +M + F G +Y+G+ D +V +WD+ R+++ + V+ V+ P
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDL----RVRECQREFRSVSPVNTVVLHPNQT 138
Query: 230 -LVSASDDNTIKLWDAR 277
L+S + I++WD R
Sbjct: 139 ELISGDQNGNIRVWDLR 155
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IWN+ G + V+ GH + FS DG +L T ++D T +W + G + H
Sbjct: 243 IWNLDG-FKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAH 300
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 55.2 bits (127), Expect = 2e-08
Identities = 29/122 (23%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTG-TRIK--KLKGHANFVNSVSGAR 214
+GH + + ++ +G+ L +G+ D T +W++ P G ++ K +LKGH + V+ +
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDP 76
Query: 215 RGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
+ +L+ +AS D +++LWDAR + S ++ + + D+ + + D
Sbjct: 77 KHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGTHVAVGNRDDELTILD 136
Query: 395 IR 400
+R
Sbjct: 137 VR 138
Score = 48.8 bits (111), Expect = 2e-06
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Frame = +2
Query: 5 IWNV--YGQCE-NVMVMKGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKL 172
IWN+ +G + + +KGHT ++ QLC+ P S L T + D +V +WD +G +++
Sbjct: 46 IWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQV 105
Query: 173 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFN 337
+ +N ++ G + V DD + + D RK P+ +Y V + +N
Sbjct: 106 ELSGENIN-ITYKPDGTHVAVGNRDDE-LTILDVRKFKPLHRRKFNYEVNEIAWN 158
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2
Query: 317 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIS----LKIKGHTDTVTGLSLSWD 469
V SV +N K+ S VD ++W+I + S L++KGHTD+V L WD
Sbjct: 23 VHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVD--QLCWD 75
Score = 33.5 bits (73), Expect = 0.086
Identities = 25/119 (21%), Positives = 48/119 (40%)
Frame = +2
Query: 17 YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVN 196
Y + + + HT + P G + G+ D+ V++WD+ ++ V
Sbjct: 178 YPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVR 237
Query: 197 SVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVD 373
++S G E + SAS+D I + + + V + SV +N + +G D
Sbjct: 238 TISFNYSG-EYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDD 295
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 55.2 bits (127), Expect = 2e-08
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTG-TRIKKLKGHANFVNSVSGARRGP 223
GHT ++ L +SP +++ + D +VAVWD+ G + K H VN +S R
Sbjct: 267 GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLAS 326
Query: 224 ELLVSASDDNTIKLWDARKRN----PVASFD-SSYPVTSVLFN-DTAEKILSSGVDNVIK 385
+L S SDD T + D R VA F+ +P+TS+ ++ A + + DN +
Sbjct: 327 CMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLT 386
Query: 386 MWDI 397
+WD+
Sbjct: 387 IWDL 390
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 55.2 bits (127), Expect = 2e-08
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
+ V +GH AI + + +L+ A D + +WD T ++K H VN +S
Sbjct: 210 MFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFN 269
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVI 382
+L +AS D+T+ L+D RK N SS+ V V ++ E +L SSG D +
Sbjct: 270 PFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRL 329
Query: 383 KMWDI 397
+WD+
Sbjct: 330 MVWDL 334
Score = 35.9 bits (79), Expect = 0.016
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Frame = +2
Query: 167 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDSSYP-----VTS 325
+L GH +S + L+S S D I LWD A ++ V + Y +
Sbjct: 163 RLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIAD 222
Query: 326 VLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSN-SMD 499
V ++ E + S+G D + +WD R NQ+ ++K H V LS + ++L+ S D
Sbjct: 223 VSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSD 282
Query: 500 NTLRI 514
+T+ +
Sbjct: 283 STVAL 287
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 54.8 bits (126), Expect = 3e-08
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Frame = +2
Query: 2 LIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 178
LIW+ GQC + ++ G+++ +G ++ G N V ++V + L+G
Sbjct: 212 LIWDCNSGQCVRSINLQAEAGSLIS-----EGPWVFLGLP-NAVKAFNVQNSKDVH-LEG 264
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDAR--KRNP---VASFDSSYPVTSVLFNDT 343
V++++ A +L + + +I +W A + +P + S + + F
Sbjct: 265 VVGQVHAMTAANG---MLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVG 321
Query: 344 AEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
E + S VD IK+WD+ Q + +K H TVT L L WD L+S+S+D T+++
Sbjct: 322 GEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSL-LCWDKC-LISSSLDGTIKL 376
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H+G + CF G LY+G+ D T+ VWD+ T LK H + +V+ + L
Sbjct: 311 HSGEVT--CFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQH---IGTVTSLLCWDKCL 365
Query: 233 VSASDDNTIKLW 268
+S+S D TIKLW
Sbjct: 366 ISSSLDGTIKLW 377
Score = 30.7 bits (66), Expect = 0.61
Identities = 37/176 (21%), Positives = 68/176 (38%), Gaps = 7/176 (3%)
Frame = +2
Query: 8 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN 187
W+ + V ++GH I + L++ + D T+ +WD +G ++ + A
Sbjct: 171 WSCFPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAE 230
Query: 188 FVNSVSGARRGPELLVSASDD----NTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKI 355
+ +S GP + + + N D V + +LF T
Sbjct: 231 AGSLIS---EGPWVFLGLPNAVKAFNVQNSKDVHLEGVVGQVHAMTAANGMLFAGT---- 283
Query: 356 LSSGVDNVIKMWDIRNNQIS--LKIKG-HTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
SSG V K D ++ ++G H+ VT + G L S S+D T+++
Sbjct: 284 -SSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVG--GEVLYSGSVDKTIKV 336
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 54.8 bits (126), Expect = 3e-08
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNSVSGARRGP 223
+T A+ ++ +SPDG L + + V ++ G ++ ++ HA VN ++ ++
Sbjct: 418 YTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQ 477
Query: 224 EL-LVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMW 391
+L +V+ +D TIK+WDA N + +F+ PV SV + + I S+ VD IK W
Sbjct: 478 QLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Query: 392 DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLS 487
N + + T ++ DG L S
Sbjct: 538 LYDNMGSRVDYDAPGRSCTSMAYCADGTRLFS 569
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV- 202
N + + H G + L FS L T D T+ VWD TG ++ +GH V SV
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVC 515
Query: 203 SGARRGPELLVSASDDNTIKLW 268
+ + + S + D IK W
Sbjct: 516 PHQKENIQFIFSTAVDGKIKAW 537
Score = 41.1 bits (92), Expect = 4e-04
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +2
Query: 233 VSASDDNTIKLWDARKRNPVASFDSSYPV-TSVLFNDTAEKILSSGVDNV-IKMWDIRNN 406
V ++ I L++ + +F + P TS+ F+ I++ G+D+ I+++++R +
Sbjct: 860 VMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVD 919
Query: 407 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
++ K+KGH VTGL+ S L+S+ D+ L
Sbjct: 920 EVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQL 953
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 62 AIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 238
A L F P D + + G D+++ +++V KLKGH V ++ + +LVS
Sbjct: 888 AATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFS-NVLNVLVS 946
Query: 239 ASDDNTIKLW 268
+ D+ + +W
Sbjct: 947 SGADSQLCVW 956
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/109 (16%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 77 CFSPDGSHLYT-GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 253
CF+ + Y A+ ++++++ T + S++ + ++ DD+
Sbjct: 850 CFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDS 909
Query: 254 TIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDI 397
+I++++ R + VT + F++ ++SSG D+ + +W +
Sbjct: 910 SIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSM 958
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 54.8 bits (126), Expect = 3e-08
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNSVSGARRGP 223
+T A+ ++ +SPDG L + + V ++ G ++ ++ HA VN ++ ++
Sbjct: 418 YTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQ 477
Query: 224 EL-LVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMW 391
+L +V+ +D TIK+WDA N + +F+ PV SV + + I S+ VD IK W
Sbjct: 478 QLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Query: 392 DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLS 487
N + + T ++ DG L S
Sbjct: 538 LYDNMGSRVDYDAPGRSCTSMAYCADGTRLFS 569
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV- 202
N + + H G + L FS L T D T+ VWD TG ++ +GH V SV
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVC 515
Query: 203 SGARRGPELLVSASDDNTIKLW 268
+ + + S + D IK W
Sbjct: 516 PHQKENIQFIFSTAVDGKIKAW 537
Score = 41.1 bits (92), Expect = 4e-04
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +2
Query: 233 VSASDDNTIKLWDARKRNPVASFDSSYPV-TSVLFNDTAEKILSSGVDNV-IKMWDIRNN 406
V ++ I L++ + +F + P TS+ F+ I++ G+D+ I+++++R +
Sbjct: 860 VMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVD 919
Query: 407 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
++ K+KGH VTGL+ S L+S+ D+ L
Sbjct: 920 EVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQL 953
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 62 AIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 238
A L F P D + + G D+++ +++V KLKGH V ++ + +LVS
Sbjct: 888 AATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFS-NVLNVLVS 946
Query: 239 ASDDNTIKLW 268
+ D+ + +W
Sbjct: 947 SGADSQLCVW 956
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/109 (16%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 77 CFSPDGSHLYT-GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 253
CF+ + Y A+ ++++++ T + S++ + ++ DD+
Sbjct: 850 CFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDS 909
Query: 254 TIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDI 397
+I++++ R + VT + F++ ++SSG D+ + +W +
Sbjct: 910 SIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSM 958
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 54.8 bits (126), Expect = 3e-08
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Frame = +2
Query: 95 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 274
S + + D V +WDV + ++K H V S+ + P LL S SDD T
Sbjct: 597 SQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT------ 650
Query: 275 RKRNPVASFDSSYPVTSVLF-NDTAEKILSSGVDNVIKMWDIRNNQISL-KIKGHTDTVT 448
+ + + V V F +D+ + D+ + +D+RN +I L + GH+ TV+
Sbjct: 651 --GVSIGTIKTKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVS 708
Query: 449 GLSLSWDGAYLLSNSMDNTLRI 514
+ D + L+S+S DNTL++
Sbjct: 709 YVKFV-DSSTLVSSSTDNTLKL 729
Score = 38.3 bits (85), Expect = 0.003
Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 9/175 (5%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IW+V + + V MK H + + S D + L +G+ D T G I +K
Sbjct: 610 IWDV-ARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT--------GVSIGTIKTK 660
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASF-DSSYPVTSVLFNDTAEKI 355
AN V V L S D+ + +D R + P+ + S V+ V F D++ +
Sbjct: 661 AN-VCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFVDSST-L 718
Query: 356 LSSGVDNVIKMWDIR------NNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDN 502
+SS DN +K+WD+ N GHT+ + LS Y+ + S N
Sbjct: 719 VSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFVGLSVSDGYIATGSETN 773
Score = 33.5 bits (73), Expect = 0.086
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG------TRIKKLKGHANFVNSVS 205
M GH+ + + F D S L + +TDNT+ +WD+ + + GH N N V
Sbjct: 700 MIGHSKTVSYVKFV-DSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFV- 757
Query: 206 GARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTAEKILS 361
G + + S+ N + ++ PV S F+++ ++ + +D ++ I S
Sbjct: 758 GLSVSDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDASQFISS 811
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 54.4 bits (125), Expect = 4e-08
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H AI L S D LY+G+ D T VW V ++ + H + VN+V G L+
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDG--LV 267
Query: 233 VSASDDNTIKLW-------DARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
+ S D T+K+W D + VT++ + +A + D + W
Sbjct: 268 FTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFW 327
Query: 392 DIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ NN + + KGH V L L G + S S D +R+
Sbjct: 328 ERENNMKNGGVLKGHKLAV--LCLVAAGNLMFSGSADLGIRV 367
Score = 42.3 bits (95), Expect = 2e-04
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Frame = +2
Query: 8 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG----TRIKKLK 175
W +N V+KGH A+ LC G+ +++G+ D + VW P G + L
Sbjct: 327 WERENNMKNGGVLKGHKLAV--LCLVAAGNLMFSGSADLGIRVWRRPEGGGEHVCLSVLT 384
Query: 176 GHANFV---------NSVSGARRGPELLVSASDDNTIKLWDARKRNP 289
GHA V SVSG RR ++ S S D ++K+W + +P
Sbjct: 385 GHAGPVKCLAVERDQESVSGERRW--IVYSGSLDRSVKMWRVSESSP 429
Score = 32.3 bits (70), Expect = 0.20
Identities = 33/141 (23%), Positives = 57/141 (40%)
Frame = +2
Query: 92 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 271
G LYTG+ + VW K ++ V ++ A + + + D I++W
Sbjct: 108 GDLLYTGSDSKNIRVW--KNHVEFSSFKSNSGLVKAIVLA---GDKIFTGHQDGKIRVWK 162
Query: 272 ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTG 451
A AS +S+ + + I +S V + + RN + H D ++
Sbjct: 163 A------ASKESNVHRRVGTMPNLLDYIRNSIVPSSYFNFTRRNRSSAALGFRHLDAISC 216
Query: 452 LSLSWDGAYLLSNSMDNTLRI 514
L+LS D L S S D T ++
Sbjct: 217 LALSEDKRLLYSGSWDKTFKV 237
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 54.4 bits (125), Expect = 4e-08
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNSVSGAR 214
+ GH+ + + F D + T + D TV +W P L H+ V +V+
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVT-VH 318
Query: 215 RGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPV--TSVLFNDTAEKILSSGVD-NVI 382
+ VSAS D T +D + +A D S V T+ F+ IL +G +V+
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDG-LILGTGTSQSVV 377
Query: 383 KMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
K+WD+++ K GHT VT +S S +G Y L+ + ++ +R+
Sbjct: 378 KIWDVKSQANVAKFDGHTGEVTAISFSENG-YFLATAAEDGVRL 420
Score = 54.4 bits (125), Expect = 4e-08
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
F PDG L TG + + V +WDV + + K GH V ++S + G L +A D +
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG--V 418
Query: 260 KLWDARKRNPVASFDSS 310
+LWD RK SF S+
Sbjct: 419 RLWDLRKLRNFKSFLSA 435
Score = 45.6 bits (103), Expect = 2e-05
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Frame = +2
Query: 107 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW----DA 274
TG D T ++D P+G + L GH+ V SV +L+++AS D T+++W D
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFV-GDSDLVLTASADKTVRIWRNPGDG 297
Query: 275 RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTV--T 448
D S V +V + T + +S+ +D +D+ + ++ + V T
Sbjct: 298 NYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYT 357
Query: 449 GLSLSWDGAYLLSNSMDNTLRI 514
+ DG L + + + ++I
Sbjct: 358 AAAFHPDGLILGTGTSQSVVKI 379
Score = 34.3 bits (75), Expect = 0.049
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 353 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
I + GVD ++D + QI + GH+ VT + D +L+ S D T+RI
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRI 290
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 54.4 bits (125), Expect = 4e-08
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNSVSGAR 214
+ GH+ + + F D + T + D TV +W P L H+ V +V+
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVT-VH 318
Query: 215 RGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPV--TSVLFNDTAEKILSSGVD-NVI 382
+ VSAS D T +D + +A D S V T+ F+ IL +G +V+
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDG-LILGTGTSQSVV 377
Query: 383 KMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
K+WD+++ K GHT VT +S S +G Y L+ + ++ +R+
Sbjct: 378 KIWDVKSQANVAKFDGHTGEVTAISFSENG-YFLATAAEDGVRL 420
Score = 54.4 bits (125), Expect = 4e-08
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
F PDG L TG + + V +WDV + + K GH V ++S + G L +A D +
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG--V 418
Query: 260 KLWDARKRNPVASFDSS 310
+LWD RK SF S+
Sbjct: 419 RLWDLRKLRNFKSFLSA 435
Score = 45.6 bits (103), Expect = 2e-05
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Frame = +2
Query: 107 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW----DA 274
TG D T ++D P+G + L GH+ V SV +L+++AS D T+++W D
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFV-GDSDLVLTASADKTVRIWRNPGDG 297
Query: 275 RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTV--T 448
D S V +V + T + +S+ +D +D+ + ++ + V T
Sbjct: 298 NYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYT 357
Query: 449 GLSLSWDGAYLLSNSMDNTLRI 514
+ DG L + + + ++I
Sbjct: 358 AAAFHPDGLILGTGTSQSVVKI 379
Score = 34.3 bits (75), Expect = 0.049
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 353 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
I + GVD ++D + QI + GH+ VT + D +L+ S D T+RI
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRI 290
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 54.0 bits (124), Expect = 6e-08
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Frame = +2
Query: 119 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 298
D V +WD TG + H SV + P VS SDD ++KLW ++ + +
Sbjct: 787 DGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGT 846
Query: 299 FDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQIS-LKIKGHTDTVTGLSLSWDG 472
S V V F+ + +L+ G D + +D+R + + GH V+ + D
Sbjct: 847 IWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKF-MDS 905
Query: 473 AYLLSNSMDNTLRI 514
++S S DN+L++
Sbjct: 906 ETIVSASTDNSLKL 919
Score = 40.7 bits (91), Expect = 6e-04
Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 10/176 (5%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
IW+ G + H + FSP D + +G+ D +V +W + + +
Sbjct: 792 IWDA-GTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGTIWSP 850
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSYPVTSVLFNDTAEKIL 358
AN V V + LL S D + +D R + P + S + +E I+
Sbjct: 851 AN-VCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDSETIV 909
Query: 359 SSGVDNVIKMWDIRNNQ--------ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDN 502
S+ DN +K+W++ SL KGHT+ + LS Y+ S N
Sbjct: 910 SASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGYIACGSETN 965
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 53.6 bits (123), Expect = 8e-08
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 10/165 (6%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWD------VPTGTRIKKLKGHANFVNSVSGA 211
GHT + L +S G+ +G DN V +WD T + + + H V +++
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWC 309
Query: 212 RRGPELLVSAS--DDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--VDNV 379
LL + D IK W+ + S ++ V S+L++ + ++LSS N
Sbjct: 310 PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSHGFTQNQ 369
Query: 380 IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ +W + ++ GHT V ++ S +G + S + D LR+
Sbjct: 370 LTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRL 414
Score = 44.8 bits (101), Expect = 3e-05
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK-G 178
+W+ G ++ + G + + ++ DG L G ++ V +WD + +++ L+ G
Sbjct: 150 LWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGG 209
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTAEK 352
H + V S++ +L + D I D R R+ + + V + ++++ K
Sbjct: 210 HESRVGSLAWDN---HILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGNK 266
Query: 353 ILSSGVDNVIKMWD 394
S G DNV+ +WD
Sbjct: 267 QASGGNDNVVHIWD 280
Score = 36.7 bits (81), Expect = 0.009
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +2
Query: 8 WNVY-GQCENVMVMKGHTGA-IMQLCFSPDGSHLYT--GATDNTVAVWDVPTGTRIKKLK 175
WN + G C N + TG+ + L +S L + G T N + +W P+ +++ +L
Sbjct: 330 WNTHTGACLNSV----ETGSQVCSLLWSQSERELLSSHGFTQNQLTLWKYPSMSKMAELN 385
Query: 176 GHANFVNSVSGARRGPELLVSASDDNTIKLWD 271
GH + V ++ + G + +A D+N ++LW+
Sbjct: 386 GHTSRVLFMAQSPNGCTVASAAGDEN-LRLWN 416
Score = 30.3 bits (65), Expect = 0.80
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 145
+W Y + + GHT ++ + SP+G + + A D + +W+V
Sbjct: 372 LWK-YPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 417
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 53.2 bits (122), Expect = 1e-07
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Frame = +2
Query: 20 GQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKL------KG 178
G C + ++GH+ L +S HL +G+ D + +WD+ + K L K
Sbjct: 166 GACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKA 225
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARK---RNPVASFDS-SYPVTSVLFNDTA 346
H V V+ R L S DD + +WD R PV S + S V + FN
Sbjct: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFN 285
Query: 347 EKILSSG-VDNVIKMWDIRNNQISL 418
E ++++G D +K++D+R +L
Sbjct: 286 EWVVATGSTDKTVKLFDLRKLSTAL 310
Score = 32.7 bits (71), Expect = 0.15
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Frame = +2
Query: 167 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDSSYPVTSVLFND 340
KL+GH++ +S ++ L+S SDD I LWD A +N + + D
Sbjct: 173 KLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVED 232
Query: 341 TA-----EKILSS-GVDNVIKMWDIRNNQISLKIK---GHTDTVTGLSLS-WDGAYLLSN 490
A E + S G D + +WD+R+ S ++ H+ V L+ + ++ + +
Sbjct: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATG 292
Query: 491 SMDNTLRI 514
S D T+++
Sbjct: 293 STDKTVKL 300
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 53.2 bits (122), Expect = 1e-07
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 6/176 (3%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
+W+ GQC + + + G+++ +G ++ G N + ++V T + L+
Sbjct: 157 VWDCNSGQCVHSINLDAEAGSLIS-----EGPWVFLGLP-NAIKAFNVQTSQDLH-LQA- 208
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDAR---KRNPVASFDS--SYPVTSVLFNDTA 346
A V V+ +L + + +I +W A + +P S + F
Sbjct: 209 AGVVGQVNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGG 268
Query: 347 EKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ + S VD IKMWD+ Q + +K HT TVT L L WD L+S+S+D T+++
Sbjct: 269 QMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSL-LCWDKC-LISSSLDGTIKV 322
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/75 (37%), Positives = 43/75 (57%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
++GH+G + CF+ G LY+G+ D T+ +WD+ T I LK H V S+
Sbjct: 254 LEGHSGEVT--CFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSL---LCWD 308
Query: 224 ELLVSASDDNTIKLW 268
+ L+S+S D TIK+W
Sbjct: 309 KCLISSSLDGTIKVW 323
Score = 33.1 bits (72), Expect = 0.11
Identities = 36/176 (20%), Positives = 73/176 (41%), Gaps = 7/176 (3%)
Frame = +2
Query: 8 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN 187
W+ + V ++GH + + L++ + D T+ VWD +G + + A
Sbjct: 115 WSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAE 174
Query: 188 FVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG 367
+ +S GP + + N IK ++ + + ++ V V A +L +G
Sbjct: 175 AGSLIS---EGPWVFLGL--PNAIKAFNVQTSQDL-HLQAAGVVGQVNAMTIANGMLFAG 228
Query: 368 VDN-VIKMWDIRNNQIS------LKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ I +W + S ++GH+ VT ++ G L S S+D T+++
Sbjct: 229 TSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG--GQMLYSGSVDKTIKM 282
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 53.2 bits (122), Expect = 1e-07
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWD-------VPTGTRIKKLKGHANFVNSVSG 208
GHT + L +S G L +G N V +WD PT + + + H V +++
Sbjct: 247 GHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAW 306
Query: 209 ARRGPELLVSAS--DDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--VDN 376
LL + D IK W+ + S ++ V S+L++ ++LSS N
Sbjct: 307 CPFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSSHGFTQN 366
Query: 377 VIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ +W + ++ GHT V ++ S +G + S + D LR+
Sbjct: 367 QLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRL 412
Score = 35.9 bits (79), Expect = 0.016
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +2
Query: 8 WNVY-GQCENVMVMKGHTGA-IMQLCFSPDGSHLYT--GATDNTVAVWDVPTGTRIKKLK 175
WN + G C N + TG+ + L +S L + G T N + +W P+ +++ +L
Sbjct: 328 WNTHTGACLNSV----ETGSQVCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKMAELN 383
Query: 176 GHANFVNSVSGARRGPELLVSASDDNTIKLWD 271
GH + V ++ + G + +A D+N ++LW+
Sbjct: 384 GHTSRVLFMAQSPNGCTVASAAGDEN-LRLWN 414
Score = 30.7 bits (66), Expect = 0.61
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV----PTGTRIKKL 172
+W Y + + GHT ++ + SP+G + + A D + +W+V P T+
Sbjct: 370 LWK-YPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPPKTTKKAAS 428
Query: 173 KGHANFVNSVSGAR 214
K + + V+ R
Sbjct: 429 KNYLELFSHVNSLR 442
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGH 181
++++ + ++V+ GHT + F D + TG+TD ++ WD+ G R ++ +GH
Sbjct: 239 VYDIRRLVDPLIVLDGHTKTVTYARFM-DSHTIVTGSTDGSLKQWDIDNGRRVVRTYRGH 297
Query: 182 ANFVNSVS-GARRGPELLVSASDDNTIKLWDARKRNPV 292
N N V R L+VS S++N + ++D R PV
Sbjct: 298 VNSRNFVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPV 335
Score = 34.7 bits (76), Expect = 0.037
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 9/158 (5%)
Frame = +2
Query: 65 IMQLCFSPD--GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELL- 232
+ L + PD G + +G D V +DV + + H + SV L+
Sbjct: 124 LSSLKWRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIG 183
Query: 233 VSASDDNTIKLWDARKRNPVASF---DSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIR 400
S SDD T+++WD R + + SV F+ ++ G D ++DIR
Sbjct: 184 ASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIR 243
Query: 401 NNQISL-KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
L + GHT TVT + D +++ S D +L+
Sbjct: 244 RLVDPLIVLDGHTKTVT-YARFMDSHTIVTGSTDGSLK 280
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 52.4 bits (120), Expect = 2e-07
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 10/166 (6%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 226
+GH ++ L +S HL + + D TV +W++ + T +K H+++V +
Sbjct: 510 QGHVDDVLDLAWSKS-QHLLSSSMDKTVRLWNLSSQTCLKVFS-HSDYVTCIQFNPVDDR 567
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 406
+S S D +++W R V +D VTS + + +L +M+ +N
Sbjct: 568 YFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRMYSASDN 627
Query: 407 ------QISL---KIKGHTDTVTGLS-LSWDGAYLLSNSMDNTLRI 514
QI+L K K H +TG + + +L S D+ +R+
Sbjct: 628 KLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTSSDSRIRV 673
Score = 45.6 bits (103), Expect = 2e-05
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-----------KGHANF 190
++ H G+I + FS DG +L + D + +W V + +L +
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKGELLLDRPELLLLATNGSPE 468
Query: 191 VNSVSGARRGPELLV--SASDDNTI---KLWDARKRNPVASFDSSYPVTSVLFNDTAEKI 355
++S RRG + S S +N L+ ++ P SF L ++ +
Sbjct: 469 PTTMSPRRRGRTSISRKSLSLENIFVPDSLFGLSEK-PFCSFQGHVDDVLDLAWSKSQHL 527
Query: 356 LSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRI 514
LSS +D +++W++ ++Q LK+ H+D VT + + D Y +S S+D +R+
Sbjct: 528 LSSSMDKTVRLWNL-SSQTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRV 580
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 52.4 bits (120), Expect = 2e-07
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSP---DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
V GH+ ++ L +SP DG L + + D+ + + TG I +GH V S S
Sbjct: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS-SCL 69
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
SAS D + KLWDA + + SF+ + V + F++ + +L+ G + +++++
Sbjct: 70 DNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRVF 129
Query: 392 DI 397
D+
Sbjct: 130 DM 131
Score = 50.8 bits (116), Expect = 5e-07
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Frame = +2
Query: 59 GAIMQLCFSPDGSHLYTGATD-NTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 235
G+I L + + + TD V +WDV +G ++ L+ + V S ++ G +
Sbjct: 146 GSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGR--YI 202
Query: 236 SASDDNTIKLWDARKRNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQI 412
+ +D +T+K WDA V S+D + S L + EK ++ G D ++++D +
Sbjct: 203 TTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEE 262
Query: 413 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
KGH V + + G S S D T+RI
Sbjct: 263 IGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRI 296
Score = 40.7 bits (91), Expect = 6e-04
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV----PTGTRIKKLKGHANFVNSVSGARRG 220
H + FS D L TG + + V+D+ T + K G + +++
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGS---IRTLTWLHSD 157
Query: 221 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
+L S +D ++LWD R V + ++ PVTS + + +++ + +K WD
Sbjct: 158 QTILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDG-RYITTADGSTVKFWD 214
Score = 37.9 bits (84), Expect = 0.004
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +2
Query: 92 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 271
G G D V V+D TG I KGH V+ V G S S+D TI++W
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSY-ASGSEDGTIRIWQ 298
Query: 272 ARKRNPVASFDSS 310
NP + SS
Sbjct: 299 TTPANPEENETSS 311
Score = 31.1 bits (67), Expect = 0.46
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 139
E + KGH G + + F+P G +G+ D T+ +W
Sbjct: 261 EEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 52.4 bits (120), Expect = 2e-07
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSP---DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
V GH+ ++ L +SP DG L + + D+ + + TG I +GH V S S
Sbjct: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS-SCL 69
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
SAS D + KLWDA + + SF+ + V + F++ + +L+ G + +++++
Sbjct: 70 DNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRVF 129
Query: 392 DI 397
D+
Sbjct: 130 DM 131
Score = 50.8 bits (116), Expect = 5e-07
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Frame = +2
Query: 59 GAIMQLCFSPDGSHLYTGATD-NTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 235
G+I L + + + TD V +WDV +G ++ L+ + V S ++ G +
Sbjct: 146 GSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGR--YI 202
Query: 236 SASDDNTIKLWDARKRNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQI 412
+ +D +T+K WDA V S+D + S L + EK ++ G D ++++D +
Sbjct: 203 TTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEE 262
Query: 413 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
KGH V + + G S S D T+RI
Sbjct: 263 IGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRI 296
Score = 40.7 bits (91), Expect = 6e-04
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV----PTGTRIKKLKGHANFVNSVSGARRG 220
H + FS D L TG + + V+D+ T + K G + +++
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGS---IRTLTWLHSD 157
Query: 221 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
+L S +D ++LWD R V + ++ PVTS + + +++ + +K WD
Sbjct: 158 QTILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDG-RYITTADGSTVKFWD 214
Score = 37.9 bits (84), Expect = 0.004
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +2
Query: 92 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 271
G G D V V+D TG I KGH V+ V G S S+D TI++W
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSY-ASGSEDGTIRIWQ 298
Query: 272 ARKRNPVASFDSS 310
NP + SS
Sbjct: 299 TTPANPEENETSS 311
Score = 31.1 bits (67), Expect = 0.46
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 139
E + KGH G + + F+P G +G+ D T+ +W
Sbjct: 261 EEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 52.0 bits (119), Expect = 2e-07
Identities = 33/124 (26%), Positives = 56/124 (45%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 226
KGH G I+ L +S G +L + + D TV +W V ++ H NFV V+
Sbjct: 319 KGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDN 376
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 406
+S S D +++WD + V D VT+V + A+ + + + + I N
Sbjct: 377 YFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFEN 436
Query: 407 QISL 418
Q+ +
Sbjct: 437 QLQM 440
Score = 36.3 bits (80), Expect = 0.012
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 22/176 (12%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-----IKKLKGHANF-VNSVS--- 205
H G+I+ + FSPDG ++ + D V VW + R + ++ F +N S
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRSQIE 276
Query: 206 -------GARRGPELLVSASDDNTIKLWD---ARKRNPVASFDSSYPVTSVLFNDTAEK- 352
+ L +SD + L + P+ F + +L +EK
Sbjct: 277 PLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGH--IGEILDLSWSEKG 334
Query: 353 -ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRI 514
+LSS VD +++W + ++ L+ H + VT ++ + D Y +S S+D +RI
Sbjct: 335 YLLSSSVDETVRLWRVGCDE-CLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRI 389
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 52.0 bits (119), Expect = 2e-07
Identities = 33/124 (26%), Positives = 56/124 (45%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 226
KGH G I+ L +S G +L + + D TV +W V ++ H NFV V+
Sbjct: 319 KGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDN 376
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 406
+S S D +++WD + V D VT+V + A+ + + + + I N
Sbjct: 377 YFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFEN 436
Query: 407 QISL 418
Q+ +
Sbjct: 437 QLQM 440
Score = 36.3 bits (80), Expect = 0.012
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 22/176 (12%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-----IKKLKGHANF-VNSVS--- 205
H G+I+ + FSPDG ++ + D V VW + R + ++ F +N S
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRSQIE 276
Query: 206 -------GARRGPELLVSASDDNTIKLWD---ARKRNPVASFDSSYPVTSVLFNDTAEK- 352
+ L +SD + L + P+ F + +L +EK
Sbjct: 277 PLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGH--IGEILDLSWSEKG 334
Query: 353 -ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRI 514
+LSS VD +++W + ++ L+ H + VT ++ + D Y +S S+D +RI
Sbjct: 335 YLLSSSVDETVRLWRVGCDE-CLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRI 389
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 52.0 bits (119), Expect = 2e-07
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRGPEL 229
H A+ L S DGS LY+ + D + +W + + K H + +N++ ++ G
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDG--F 248
Query: 230 LVSASDDNTIKLWDA--RKRNPVASFDSSYPVTSVLFNDTAEKILSSGV-DNVIKMWD-- 394
+ + S D IK+W+ +K + VA+ + L K+L SG D I +W+
Sbjct: 249 VYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERL 308
Query: 395 IRNNQISL------KIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
I + L ++GH + L+++ D +LS S D +LR+
Sbjct: 309 INGDDEELHMSVVGALRGHRKAIMCLAVASD--LVLSGSADKSLRV 352
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Frame = +2
Query: 5 IWNVYGQCEN-VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
+WN + + V + H A+ L S DG LY+GA D ++ VW+ ++L H
Sbjct: 260 VWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEEL--H 317
Query: 182 ANFVNSVSGARR-------GPELLVSASDDNTIKLW 268
+ V ++ G R+ +L++S S D ++++W
Sbjct: 318 MSVVGALRGHRKAIMCLAVASDLVLSGSADKSLRVW 353
Score = 36.3 bits (80), Expect = 0.012
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
Frame = +2
Query: 101 LYTGATDNTVAVWD-VPTGTRIKKLKGHANFVNSVSGARRG----PELLVSASDDNTIKL 265
LYTG++++ + VW P + N V + +G + + L+SA D+ I++
Sbjct: 82 LYTGSSNSEIRVWPREPPFSPEYSTGDDRNVVANGNGGVKSLVILGDKLISAHQDHKIRV 141
Query: 266 WDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTV 445
W + T ND + + SS ++R ++ + H D V
Sbjct: 142 WKIIDESNRRGQKYKCVATLPTMNDRFKTLFSSK-----SYVEVRRHKKCTWVH-HVDAV 195
Query: 446 TGLSLSWDGAYLLSNSMDNTLRI 514
+ L+LS DG+ L S S D + +I
Sbjct: 196 SSLALSQDGSLLYSASWDRSFKI 218
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 51.6 bits (118), Expect = 3e-07
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH--ANFVNSVSG 208
V V++GH ++M + F P S L+TG+ D + +WD + H AN V +V+
Sbjct: 10 VAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAA 69
Query: 209 AR-RGPELLVSASDDNTIKLWD 271
+ G + ++S D T+K WD
Sbjct: 70 SPWLGEDKIISQGRDGTVKCWD 91
Score = 35.5 bits (78), Expect = 0.021
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 89 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 268
DG T D+ + V++ G + LK H N+VS + EL+ SAS+D T+ LW
Sbjct: 319 DGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSP-DCELMASASEDATVALW 377
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 353 ILSSGVDNVIKMWDIRNNQISL-KIKGHTDTVTGLSLS 463
+L+ D I +WDIRN +I L +K H++ V LS++
Sbjct: 234 VLAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVA 271
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 51.6 bits (118), Expect = 3e-07
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSP---DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 208
+V GH+ ++ L +SP DG L + + D+ + + TG I +GH V S S
Sbjct: 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWS-SC 68
Query: 209 ARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKM 388
SAS D + KLWDA + + SF+ + V + F+ + +++ G + ++++
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSQDTKYLITGGFEKILRV 128
Query: 389 WDI 397
+D+
Sbjct: 129 FDL 131
Score = 49.2 bits (112), Expect = 2e-06
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Frame = +2
Query: 59 GAIMQLCFSPDGSHLYTGATD-NTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 235
G+I L + + + TD V +WDV +G ++ L+ + V S ++ G +
Sbjct: 146 GSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGR--YI 202
Query: 236 SASDDNTIKLWDARKRNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQI 412
+ +D +T+K WDA V S+D + S L + K ++ G D ++++D +
Sbjct: 203 TTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKE 262
Query: 413 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
KGH V + + G S S D T+RI
Sbjct: 263 IGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRI 296
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV----PTGTRIKKLKGHANFVNSVSGARRG 220
H + FS D +L TG + + V+D+ T I K G + + G +
Sbjct: 101 HKHIVRACAFSQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQT- 159
Query: 221 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
+L S +D ++LWD R V + ++ PVTS + + +++ + +K WD
Sbjct: 160 --ILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDG-RYITTADGSTVKFWD 214
Score = 41.5 bits (93), Expect = 3e-04
Identities = 31/88 (35%), Positives = 40/88 (45%)
Frame = +2
Query: 92 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 271
G+ G D V ++D TG I KGH V+ V A G E S S+D TI++W
Sbjct: 240 GNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTG-ESYASGSEDGTIRIWQ 298
Query: 272 ARKRNPVASFDSSYPVTSVLFNDTAEKI 355
NP S P SV ++ A KI
Sbjct: 299 TGPVNP-EEISESKPKQSV--DEVARKI 323
Score = 31.1 bits (67), Expect = 0.46
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 139
KGH G + + F+P G +G+ D T+ +W
Sbjct: 267 KGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 51.6 bits (118), Expect = 3e-07
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Frame = +2
Query: 161 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKR-------NPVASFDSSYPV 319
+K KGH + R E ++++S+D ++++WD P + PV
Sbjct: 271 LKNTKGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPV 330
Query: 320 TSVLFNDTAEKILSSGVDNVIKMWDIR---NNQISLKI-KGHTDTVTGLSLSWDGAYLLS 487
T+ ++ ++I D I++W ++ ++ + + K HTD +T + S DG LLS
Sbjct: 331 TTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLS 390
Query: 488 NSMDNTLRI 514
S D +L++
Sbjct: 391 RSFDGSLKV 399
Score = 41.1 bits (92), Expect = 4e-04
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Frame = +2
Query: 5 IWNVYGQCENVMVMK---GHTGAI-MQLC-FSPDGSHLYTGATDNTVAVWDVPTG----T 157
IW+V V+K G + + C + DG + G D ++ +W + G
Sbjct: 305 IWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRP 364
Query: 158 RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFD---SSYPVTS 325
I K H + + SV + G +L+S S D ++K+WD R+ + + F+ + YP T+
Sbjct: 365 DIYVGKAHTDDITSVKFSSDG-RILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTN 423
Query: 326 VLFNDTAEKILS 361
V F+ + IL+
Sbjct: 424 VAFSPDEQIILT 435
Score = 33.5 bits (73), Expect = 0.086
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Frame = +2
Query: 107 TGATDNTVAVWDVP---TGTRI--KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 271
T + D ++ +WDV + T++ KL + R + + D +I++W
Sbjct: 296 TSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWS 355
Query: 272 ARK---RNPVASFDSSYP--VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKI 424
+ P ++ +TSV F+ +LS D +K+WD+R + +LK+
Sbjct: 356 LKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKV 411
Score = 31.9 bits (69), Expect = 0.26
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 416 LKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+++KGHT V+ L++ GA +LS S D T+R+
Sbjct: 171 IQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRM 203
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 51.2 bits (117), Expect = 4e-07
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 5/127 (3%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRIKKLKG--HANF-VNSVSGA 211
+ GHT A+ + +S HL A D V VW+V + + KK++ H N V V +
Sbjct: 156 LTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDK-KKVRAFLHHNAPVKDVKWS 214
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFN-DTAEKILSSGVDNVIKM 388
++G LL S D T +L+D + SF V V F+ D LS G +++
Sbjct: 215 KQGLSLL-SCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRL 273
Query: 389 WDIRNNQ 409
WDIR N+
Sbjct: 274 WDIRANK 280
Score = 36.3 bits (80), Expect = 0.012
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 47 KGH--TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 220
+GH G ++ FSPDG L +G++D +V ++D + IKKLK + +VS
Sbjct: 381 EGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVL 440
Query: 221 PELLVSASDDNTIKLWD 271
P ++ + S + + +++
Sbjct: 441 PNVVAACSWNGQVSVFE 457
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 51.2 bits (117), Expect = 4e-07
Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Frame = +2
Query: 107 TGATDNTVAVWDVPTGT---RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 277
+ + D + WD+ TGT + K A+ + +V L + + +I W
Sbjct: 8 SSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNTSGSIFYWSWT 67
Query: 278 KRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLS 457
K P+ ++ N+ ++ G+ I +W++ ++ K GH +VT L
Sbjct: 68 KPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLV 127
Query: 458 LSWDGAYLLSNSMDNTLRI 514
S D + L+S S D ++R+
Sbjct: 128 FSGDDSLLVSGSQDGSIRV 146
Score = 45.2 bits (102), Expect = 3e-05
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 244
I L + +G++L G + +W+V TG +KK GH V + + LLVS S
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFS-GDDSLLVSGS 139
Query: 245 DDNTIKLW-------DARKRNPVASFDSSY-----PVTSVL--FNDTAEKILSSGVDNVI 382
D +I++W D +++ ++ ++ VT ++ + I+SS D
Sbjct: 140 QDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTC 199
Query: 383 KMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
K+W + ++ LK + L+L G + + D+ + I
Sbjct: 200 KVWSLSRGKL-LKNIIFPSVINALALDPGGCVFYAGARDSKIYI 242
Score = 31.5 bits (68), Expect = 0.35
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 62 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
AI L + DG+ L +G+ D V VWD P R H + G+R+GP
Sbjct: 265 AITCLAYCADGNLLISGSEDGVVCVWD-PKSLR------HVRTLIHAKGSRKGP 311
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 145
GH ++ L FS D S L +G+ D ++ VW +
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPT----GTRIK-KLKGHANFVNSVSGARRGPEL 229
I L P G Y GA D+ + + + GT++ + + ++ G L
Sbjct: 219 INALALDPGGCVFYAGARDSKIYIGAINATSEYGTQVLGSVSEKGKAITCLAYCADG-NL 277
Query: 230 LVSASDDNTIKLWDAR 277
L+S S+D + +WD +
Sbjct: 278 LISGSEDGVVCVWDPK 293
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 51.2 bits (117), Expect = 4e-07
Identities = 31/104 (29%), Positives = 52/104 (50%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
FS DG L + D+TV + D TG +K L GH V R E++ S S D+ +
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEV 170
Query: 260 KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
+LW+A+ + + D P+ S+ F+ E +L+ + + +W
Sbjct: 171 RLWNAKTGECIRTHDFYRPIASIAFHAGGE-LLAVASGHKLHIW 213
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 51.2 bits (117), Expect = 4e-07
Identities = 31/104 (29%), Positives = 52/104 (50%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
FS DG L + D+TV + D TG +K L GH V R E++ S S D+ +
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEV 170
Query: 260 KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
+LW+A+ + + D P+ S+ F+ E +L+ + + +W
Sbjct: 171 RLWNAKTGECIRTHDFYRPIASIAFHAGGE-LLAVASGHKLHIW 213
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 50.8 bits (116), Expect = 5e-07
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 9/178 (5%)
Frame = +2
Query: 8 WNVYGQCENVMVMKGHTGAIMQ-----LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 172
W +NV+ G G+I++ + G LYTG+ + VW K L
Sbjct: 102 WGADFNEDNVLETNGLIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVW--------KNL 153
Query: 173 KGHANFVNSVSGARRG----PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFND 340
K HA F +S SG + + + + D I++W KR P + L
Sbjct: 154 KEHAGFKSS-SGLIKAIVIFGDRIFTGHQDGKIRIWKVSKRKP-----GKHKRVGTL--P 205
Query: 341 TAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
T + ++ S V N ++R N+ S+K K H D V+ LSL + L S+S D T+++
Sbjct: 206 TFKSMVKSSV-NPKHFMEVRRNRNSVKTK-HNDAVSSLSLDVELGLLYSSSWDTTIKV 261
Score = 47.6 bits (108), Expect = 5e-06
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 8/160 (5%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H A+ L + LY+ + D T+ VW + ++ + H + +NSV +L+
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSG--FDDLV 291
Query: 233 VSASDDNTIKLWDAR-----KRNPVAS--FDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
+ S D T+K+W ++ +A VT++ + + D ++ W
Sbjct: 292 FTGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYW 351
Query: 392 DIRNNQISLKI-KGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
+ + I KGH V L ++ G LLS S D +
Sbjct: 352 ERSKRSFTGGILKGHKSAVLCLGIA--GNLLLSGSADKNI 389
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 139
++KGH A+ LC G+ L +G+ D + VW
Sbjct: 362 ILKGHKSAV--LCLGIAGNLLLSGSADKNICVW 392
Score = 28.7 bits (61), Expect = 2.5
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK-LKGHANFVNSVSGARR 217
V+ A+ L S +Y G++D V W+ + LKGH + V + A
Sbjct: 319 VLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGIA-- 376
Query: 218 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 331
LL+S S D I +W +R+P D S+ SVL
Sbjct: 377 -GNLLLSGSADKNICVW---RRDP---SDKSHQCLSVL 407
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 50.8 bits (116), Expect = 5e-07
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Frame = +2
Query: 98 HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 277
++ G + V DV + T K L GH + VN + P+L+++AS D +++LW+
Sbjct: 100 YVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVE 159
Query: 278 KRNPVASFDSS----YPVTSVLFNDT-AEKILSSGVDNVIKMWDIR 400
+ F + Y V SV F+ + + S G+D IK+W ++
Sbjct: 160 TGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSMK 205
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 50.4 bits (115), Expect = 7e-07
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL----KGHANFVN----- 196
++ H G+I + FS DG +L + D + +W V R +L K +N
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQEDGSINLFLLA 418
Query: 197 -------SVSGARRGPELL--VSASDDNTI--KLWDARKRNPVASFDSSYPVTSVLFNDT 343
S+S RRG S S DN + + PV SF L
Sbjct: 419 NGSPEPVSMSPKRRGRTSFSRKSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSWSK 478
Query: 344 AEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRI 514
++ +LSS +D +++WD+ +++ LK+ H+D VT + + D Y +S S+D +RI
Sbjct: 479 SQHLLSSSMDKTVRLWDL-SSKTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Score = 43.2 bits (97), Expect = 1e-04
Identities = 38/178 (21%), Positives = 74/178 (41%), Gaps = 11/178 (6%)
Frame = +2
Query: 14 VYGQCEN-VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF 190
V+G E V GH ++ L +S HL + + D TV +WD+ + T + K+ H+++
Sbjct: 453 VFGLSEKPVCSFVGHLDDVLDLSWSKS-QHLLSSSMDKTVRLWDLSSKTCL-KVFSHSDY 510
Query: 191 VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGV 370
V + +S S D +++W V D VT+ + + L
Sbjct: 511 VTCIQFNPVDDNYFISGSLDAKVRIWSIPDHQVVDWNDLHEMVTAACYTPDGQGALVGSY 570
Query: 371 DNVIKMWDIRNNQI---------SLKIKGHTDTVTGLS-LSWDGAYLLSNSMDNTLRI 514
+++ +N++ + K K H +TG ++ + +L S D+ R+
Sbjct: 571 KGTCCLYNTHDNKLQQRREINLKNRKKKTHHKKITGFQFVAGSSSEVLVTSADSRTRV 628
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 50.0 bits (114), Expect = 9e-07
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Frame = +2
Query: 230 LVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEKILSS---GVDNVIKMWDI 397
+V+ASDD++I+L+D + + +S Y V V F ++ S G D+ +++ +
Sbjct: 48 MVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSL 107
Query: 398 RNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
+N+ KGH D V LSL G +S S+D T+
Sbjct: 108 HDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTV 144
Score = 36.3 bits (80), Expect = 0.012
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 226
KGH ++ L G +G+ D TV +WD R++K +G + A
Sbjct: 117 KGHHDRVVSLSLCSGGECFISGSLDRTVLLWD----QRVEKCQGLLRVQGRPAAAYDDQG 172
Query: 227 LLVSASDDNTIKLWDAR--KRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKMW 391
L+ + + I+++DAR ++ P F ++ V F++ +L + +D I +
Sbjct: 173 LIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVL 232
Query: 392 D-IRNNQIS-LKIKGHT-DTVTGLSLSWDGAYLLSNSMDNT 505
D R +S +K ++ + S +G +++S S D +
Sbjct: 233 DSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSGDGS 273
Score = 27.9 bits (59), Expect = 4.3
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 68 MQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 178
+ FSP+G + +G+ D + W V +G ++ G
Sbjct: 254 LDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMG 290
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 50.0 bits (114), Expect = 9e-07
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Frame = +2
Query: 230 LVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEKILSS---GVDNVIKMWDI 397
+V+ASDD++I+L+D + + +S Y V V F ++ S G D+ +++ +
Sbjct: 45 MVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSL 104
Query: 398 RNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
+N+ KGH D V LSL G +S S+D T+
Sbjct: 105 HDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTV 141
Score = 36.3 bits (80), Expect = 0.012
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 226
KGH ++ L G +G+ D TV +WD R++K +G + A
Sbjct: 114 KGHHDRVVSLSLCSGGECFISGSLDRTVLLWD----QRVEKCQGLLRVQGRPAAAYDDQG 169
Query: 227 LLVSASDDNTIKLWDAR--KRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKMW 391
L+ + + I+++DAR ++ P F ++ V F++ +L + +D I +
Sbjct: 170 LIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVL 229
Query: 392 D-IRNNQIS-LKIKGHT-DTVTGLSLSWDGAYLLSNSMDNT 505
D R +S +K ++ + S +G +++S S D +
Sbjct: 230 DSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSGDGS 270
Score = 27.9 bits (59), Expect = 4.3
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 68 MQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 178
+ FSP+G + +G+ D + W V +G ++ G
Sbjct: 251 LDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMG 287
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 50.0 bits (114), Expect = 9e-07
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Frame = +2
Query: 107 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR-KR 283
+G+ D V VWDV TG ++ H V++V+ PE+L+S S D T+ L D R
Sbjct: 232 SGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPS 291
Query: 284 NPVASFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRNNQI--SLKIKGHTDTVTGL 454
N + + V + ++ +E + S D +K +D R + + S I H V+ +
Sbjct: 292 NSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSI 351
Query: 455 SLSWDGAYLL-SNSMDNTLRI 514
S + LL + S D ++++
Sbjct: 352 SYNIHAPNLLATGSADESVKL 372
Score = 37.9 bits (84), Expect = 0.004
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDV--PTGTRIKKL 172
+W+V G+C+ + M+ H + + ++ L +G+ D TV + D P+ + +K
Sbjct: 241 VWDVATGKCK--VTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNSGLK-W 297
Query: 173 KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF---DSSYPVTSVLFNDT 343
A V ++ V + D T+K +D R + SF V+S+ +N
Sbjct: 298 STEAK-VEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSISYNIH 356
Query: 344 AEKILSSG-VDNVIKMWDIRNNQIS 415
A +L++G D +K+WD+ NNQ S
Sbjct: 357 APNLLATGSADESVKLWDLSNNQPS 381
Score = 33.1 bits (72), Expect = 0.11
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Frame = +2
Query: 92 GSHLYTGATDNTVAVWD------VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 253
G+ + G ++++ +WD V ++ ++ G F + + R ++ S S+D
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRN--IVASGSEDK 237
Query: 254 TIKLWD-ARKRNPVASFDSSYPVTSVLFND-TAEKILSSGVDNVIKMWDIRNNQISLKIK 427
+K+WD A + V V +V +N+ T E +LS D + + D R+ S +K
Sbjct: 238 KVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNS-GLK 296
Query: 428 GHTDTVTGLSLSWD 469
T+ L+WD
Sbjct: 297 WSTEAKVE-KLAWD 309
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 50.0 bits (114), Expect = 9e-07
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Frame = +2
Query: 5 IW-NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG-----TRIK 166
+W N E+V V++GH + + ++ GS L T D +V +W++ I
Sbjct: 74 VWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIA 133
Query: 167 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKR----NPVASFDS-----SYPV 319
L GH+ V V ++L S S DNTIK+W + N V + S V
Sbjct: 134 VLTGHSEDVKMVLW-HPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTV 192
Query: 320 TSVLFNDTAEKILSSGVDNVIKMW 391
S+ FN +K+++ D +K+W
Sbjct: 193 WSISFNAAGDKMVTCSDDLAVKIW 216
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +2
Query: 161 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 271
++KL+GH + V +V+ ++ S S D T+++W+
Sbjct: 13 VQKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 50.0 bits (114), Expect = 9e-07
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 19/176 (10%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
++ H GA+ + FS D +L +G D + VW+V + +G ++ G
Sbjct: 400 IQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGSLTPIHPSLCDSSGN 459
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFD---------SSYPVTSV---------LFNDTAE 349
E+ V K R+ N + + S PV S+ L ++
Sbjct: 460 EITVVEKKKKG-KGSSGRRHNHIPDYVHVPETVFSFSDKPVCSLKGHLDAILDLSWSKSQ 518
Query: 350 KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRI 514
+LSS +D +++WDI + LK+ H D VT + S D Y LS S+D +RI
Sbjct: 519 LLLSSSMDKTVRLWDI-ETKTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRI 573
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 50.0 bits (114), Expect = 9e-07
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 11/162 (6%)
Frame = +2
Query: 62 AIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 238
AI L P D LY G VWD+ G + + H +NS+ + P ++ +
Sbjct: 307 AIFSLSQRPNDEQSLYFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPHVMAT 366
Query: 239 ASDDNTIKLWD-----ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 403
+S D T LWD A+K +++ + S V S F+ + + ++ +DN I + N
Sbjct: 367 SSTDGTACLWDLRSMGAKKPKTLSTVNHSRAVHSAYFSPSGLSLATTSLDNYIGVLSGAN 426
Query: 404 NQISLKIKGHTDTVTGLS-----LSWDGAYLLSNSMDNTLRI 514
+ + I H +T +S WD +Y+ ++ + +
Sbjct: 427 FENTCMIY-HNNTSRWISKFKAVWGWDDSYIYVGNLSKKIDV 467
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 50.0 bits (114), Expect = 9e-07
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Frame = +2
Query: 23 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 202
+C + +K H+ A+ L + D LY+ + D TV VW + I+ +K H + VNSV
Sbjct: 125 RCRTALWIK-HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV 183
Query: 203 SGARRGPELLVSASDDNTIKLWDAR---KRNPVASFDS----SYPVTSVLFNDTAEKILS 361
+ A L+ + S D T+K+W KR + F + VT+++ + A + S
Sbjct: 184 TTAE---SLVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMA--VYS 238
Query: 362 SGVDNVIKMWDIRNNQI 412
D + W++ + ++
Sbjct: 239 GSSDGAVNFWEMGDKKL 255
Score = 40.3 bits (90), Expect = 8e-04
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Frame = +2
Query: 101 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 280
LYTG+ +N + VW K ++ V ++ +R + + D I++W
Sbjct: 37 LYTGSDNNYIRVWK--NLNEFSGFKSNSGLVKAIVISREAK--VFTGHQDGKIRVWKTSS 92
Query: 281 RNP-VASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLS 457
+NP V + S P + + + N + ++R + +L IK H+D V+ LS
Sbjct: 93 KNPRVYTRAGSLPALKDVLKSSVKP------SNYV---EVRRCRTALWIK-HSDAVSCLS 142
Query: 458 LSWDGAYLLSNSMDNTLRI 514
L+ D L S S D T+++
Sbjct: 143 LAEDQGLLYSASWDRTVKV 161
Score = 32.3 bits (70), Expect = 0.20
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRIKKLKGHANFVNSV---- 202
V K H A+ LC + G L++GA D + VW + T + L GH V +
Sbjct: 261 VFKKHRLAV--LCIAAAGKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLAVVE 318
Query: 203 -SGARR-----GPELLVSASDDNTIKLW 268
SG G +L S S D ++K+W
Sbjct: 319 PSGGEEEDGGDGRLVLYSGSLDKSVKVW 346
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
+LL + SD+N I++W + N + F S+ + + K+ + D I++W
Sbjct: 35 DLLYTGSDNNYIRVW--KNLNEFSGFKSNSGLVKAIVISREAKVFTGHQDGKIRVW 88
Score = 29.5 bits (63), Expect = 1.4
Identities = 29/156 (18%), Positives = 67/156 (42%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 226
K ++G + + S + ++TG D + VW T ++ ++ A + ++ +
Sbjct: 59 KSNSGLVKAIVISREAK-VFTGHQDGKIRVWK--TSSKNPRVYTRAGSLPALKDVLKS-- 113
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 406
S N +++ R + D+ V+ + + + S+ D +K+W I +
Sbjct: 114 ---SVKPSNYVEVRRCRTALWIKHSDA---VSCLSLAEDQGLLYSASWDRTVKVWRIHDL 167
Query: 407 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ IK H D V S++ + + + S D T+++
Sbjct: 168 KCIESIKAHDDAVN--SVTTAESLVFTGSADGTVKV 201
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 12/60 (20%)
Frame = +2
Query: 5 IWNVYGQCEN-VMVMKGHTGAIMQLCF-SPDGSH----------LYTGATDNTVAVWDVP 148
+W G+ V V+ GHTG + L P G LY+G+ D +V VW VP
Sbjct: 290 VWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLYSGSLDKSVKVWRVP 349
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 49.6 bits (113), Expect = 1e-06
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT-RIKKLKGHANFVNSVS 205
E V + GHT + + + P+ +Y+ + D++V WDV TG + G A +N+V
Sbjct: 263 EAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKA--LNTVD 319
Query: 206 GARRGPELLVSASDDNTIKLWDARKRN---PVASFDS-SYPVTSVLFNDTAE-KILSSGV 370
L+ + D +++WD RK PV F S S +++ ++ ++ +LS+
Sbjct: 320 VGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASY 379
Query: 371 DNVIKMWDIR 400
D I +WD+R
Sbjct: 380 DGKIMLWDLR 389
Score = 41.1 bits (92), Expect = 4e-04
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCF--SPDGSHLY--TGATDNTVAVW------DVPTG 154
+W+ G C +++ +GH+GAI + S D + T + D T+ ++ V +
Sbjct: 135 VWSSAGSCSHIL--EGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDST 192
Query: 155 TRI---KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTS 325
T++ K L+GH V SVS + G ++ S+S D TI LW+ N S S V
Sbjct: 193 TKVRAYKILRGHKASVQSVSAQKSG-NMVCSSSWDCTINLWNT---NESTSEGESVSVKK 248
Query: 326 VLFNDTAEKILSSG 367
N+ AE+ S G
Sbjct: 249 RKGNNQAEESQSEG 262
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 49.6 bits (113), Expect = 1e-06
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 7/167 (4%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 208
+NV+ ++ H A+ L + D LY+G+ D T+ VW + ++ ++ H + VN+V
Sbjct: 237 KNVLKIR-HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVS 295
Query: 209 ARRGPELLVSASDDNTIKLW----DARKRNPV---ASFDSSYPVTSVLFNDTAEKILSSG 367
+L+ + S D T+K+W ++ V VT++ N T +
Sbjct: 296 G--FDDLVFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGS 353
Query: 368 VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
D + W+ R ++ K H + L L+ G+ LLS D +
Sbjct: 354 SDGTVNFWE-RQKYLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNI 399
Score = 32.7 bits (71), Expect = 0.15
Identities = 34/156 (21%), Positives = 68/156 (43%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 226
K +G + + + D + ++TG D + VW G+ KK + V S+ +
Sbjct: 169 KSTSGFVKAIVVTRD-NRVFTGHQDGKIRVW---RGS--KKNPEKYSRVGSLPTLKEF-- 220
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 406
L S + N +++ R+R V V+ + N+ + S D +K+W + ++
Sbjct: 221 LTKSVNPRNYVEV---RRRKNVLKIRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDS 277
Query: 407 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ I+ H D V + +D + + S D TL++
Sbjct: 278 KCLESIEAHDDAVNTVVSGFDD-LVFTGSADGTLKV 312
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVW 139
GH A+ LC + GS L +G D + VW
Sbjct: 375 GHRMAV--LCLATAGSLLLSGGADKNICVW 402
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 49.2 bits (112), Expect = 2e-06
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
HT +++ L ++ + ++ A+ D V VWDV TGT ++ H V +V+ PE+
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 323
Query: 230 LVSASDDNTIKLWDARKRNPVA-SFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRN 403
L+S S D T+ + D R+ + + V S+ ++ E + S D +K +DIR
Sbjct: 324 LLSGSFDQTVVMKDGRQPSHSGFKWSVMSDVESLAWDPHCEHSFVVSLEDGTVKGFDIRA 383
Query: 404 NQ 409
Q
Sbjct: 384 AQ 385
Score = 35.9 bits (79), Expect = 0.016
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Frame = +2
Query: 5 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKG 178
+W+V G C+ + M+ HT + + ++ L +G+ D TV + D +
Sbjct: 292 VWDVATGTCK--ITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVMKDGRQPSHSGFKWS 349
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKR--------NPVASFDSSYP---VTS 325
+ V S++ V + +D T+K +D R NP + + V+S
Sbjct: 350 VMSDVESLAWDPHCEHSFVVSLEDGTVKGFDIRAAQSGSDSDLNPTYTIQAHAQDRGVSS 409
Query: 326 VLFNDTAEKILSSG-VDNVIKMWDIRNNQIS--LKIKGHTDTVTGLSLSWDGAYLLS 487
+ +N + +L++G +D +K+WD+ NN+ S + + V +S + D +LL+
Sbjct: 410 ISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLA 466
Score = 31.1 bits (67), Expect = 0.46
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 317 VTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSN 490
V + +N IL+S D +K+WD+ + ++ HT V ++ + + LLS
Sbjct: 268 VLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSG 327
Query: 491 SMDNTL 508
S D T+
Sbjct: 328 SFDQTV 333
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 49.2 bits (112), Expect = 2e-06
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Frame = +2
Query: 53 HTGAIMQLC-FSPDGSHLYTGATDNTVAVW----DVPTGTRIKKLKGH--ANFVNSVSGA 211
H G +Q S DG + TGA D V+VW D P G+R +L+ A+ +
Sbjct: 3272 HEGNQIQCAGVSHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLR 3331
Query: 212 RRGPELLV-SASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIK 385
P +++ S+SDD T+ +WD + V + S PVT V ND +I+++ +V+
Sbjct: 3332 VSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYINDLTGEIVTA-AGSVLA 3390
Query: 386 MWDIRNNQISL 418
+W I + +S+
Sbjct: 3391 VWSINGDCLSV 3401
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 49.2 bits (112), Expect = 2e-06
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +2
Query: 158 RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLF 334
R +K++ H +V G + +V+AS D +I D VA ++++ + L
Sbjct: 43 RERKVRAHKESCRAVRFIDDG-QRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLI 101
Query: 335 NDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
N T I S +K+WD R S + H D ++G++ + D L+ S D TL +
Sbjct: 102 NVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSV 161
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 48.8 bits (111), Expect = 2e-06
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG--HANFVNSVSGARRG 220
KGH ++ LC SP +G+ D +V +WD+ R+ +G H +V+ ++G
Sbjct: 111 KGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDL----RVNACQGILHLRGRPAVAYDQQG 166
Query: 221 PELLVSASDDNTIKLWDAR--KRNPVASF---DSSYPVTSVLFNDTAEKILSSGVDNVIK 385
+ A + +KL+D+R + P +F + V + F++ + +L + +N I
Sbjct: 167 LVFAI-AMEGGAVKLFDSRCYDKGPFDTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIY 225
Query: 386 MWDIRNNQ--ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
+ D + ++ T + + DG Y+LS S D TL
Sbjct: 226 VLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLSGSGDGTL 268
Score = 40.7 bits (91), Expect = 6e-04
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Frame = +2
Query: 191 VNSVSGARRGPELLVSASDDNTIKLWD-ARKRNPVASFDSSYPVTSVLFNDTAEKILSSG 367
++SV G R +LLV++S+D++++L+D A + ++ + V F ++ S
Sbjct: 27 IHSV-GFHRTDDLLVTSSEDDSLRLFDIANAKQLKITYHKKHGTDRVCFTHHPSSLICSS 85
Query: 368 VDNV------IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
N+ ++ + +N+I KGH D V L +S +S S+D ++R+
Sbjct: 86 RYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRL 140
Score = 33.9 bits (74), Expect = 0.065
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = +2
Query: 59 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 238
G ++ F+PDG ++ +G+ D T+ W++ + + + + + V+ + A R + V+
Sbjct: 245 GTPIEATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPR-RAMFVA 303
Query: 239 AS 244
AS
Sbjct: 304 AS 305
Score = 31.1 bits (67), Expect = 0.46
Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
+ ++ G T + + FS DG + T+N + V D G + + +
Sbjct: 192 DTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEAT 251
Query: 212 -RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 331
+ ++S S D T+ W+ + VA ++++ V S L
Sbjct: 252 FTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCL 292
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 48.4 bits (110), Expect = 3e-06
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNT-VAVWDVPTGTRIKKLKGHANFVNSVSGARR 217
V +GH I + + +++ A D+ + +WD+ T ++K H +N +S
Sbjct: 213 VYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPF 272
Query: 218 GPELLVSASDDNTIKLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVIKM 388
+L +AS D+T+ L+D RK S + V V ++ E +L SSG D + +
Sbjct: 273 NEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMV 332
Query: 389 WDI 397
WDI
Sbjct: 333 WDI 335
Score = 38.7 bits (86), Expect = 0.002
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Frame = +2
Query: 167 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA------RKRNPVASFDSSYPVTS- 325
+L GH ++ + L+S S D I LWD + NP+ ++ +
Sbjct: 164 RLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIED 223
Query: 326 VLFNDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSN-SMD 499
V ++ E I S+G D + +WD+R NQ+ ++K H + LS + ++L+ S D
Sbjct: 224 VAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSD 283
Query: 500 NTLRI 514
+T+ +
Sbjct: 284 STVAL 288
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 48.4 bits (110), Expect = 3e-06
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W++ + V GH GA+ L S DG+ L + TD TV +W+VP +
Sbjct: 83 LWDISSR-RTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNVPRPSLEDSSISSE 141
Query: 185 NFV---------NSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLF 334
NF+ N+ E + A+ + +W+ + PV SF + V SV F
Sbjct: 142 NFIEPSATYVWKNAFWAVDHQFEGDLFATAGAQLDIWNHNRSQPVQSFQWGTDSVISVRF 201
Query: 335 NDTAEKIL-SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWD 469
N +L +S D I ++D+R + + KI T T S++W+
Sbjct: 202 NPGEPNLLATSASDRSITIYDLRLSSAARKIIMMTKT---NSIAWN 244
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +2
Query: 353 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
I S+ +D I++WDI + + + GH V GL+ S DG L+S D T+R+
Sbjct: 72 IFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRL 125
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
V M GH + + +P+ +++ + D + +WD+ + + + GH V ++ +
Sbjct: 49 VGAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTAS 108
Query: 212 RRGPELLVSASDDNTIKLWD 271
G +LVS D T++LW+
Sbjct: 109 TDG-NVLVSCGTDCTVRLWN 127
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 220
V K H A+M + FSP G TG+ D +V ++ G +++ H + V +
Sbjct: 274 VHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPY-NGGHSREIY-HTKRMQRVFCVKYS 331
Query: 221 PE--LLVSASDDNTIKLWDAR 277
+ ++S SDD ++LW A+
Sbjct: 332 CDATYVISGSDDTNLRLWKAK 352
Score = 35.9 bits (79), Expect = 0.016
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 170 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAE 349
+ GH + V+ ++ + + SAS D I+LWD R V F L T
Sbjct: 52 MDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDG 111
Query: 350 KIL-SSGVDNVIKMWDI 397
+L S G D +++W++
Sbjct: 112 NVLVSCGTDCTVRLWNV 128
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 48.4 bits (110), Expect = 3e-06
Identities = 27/75 (36%), Positives = 33/75 (44%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H AI + + S L T + D T+ VWDV L GH V S+ +LL
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 233 VSASDDNTIKLWDAR 277
VS S D LWD R
Sbjct: 187 VSGSRDGCFALWDLR 201
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 83 SPDGSHLYTGATDNTVAVWDV--PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 256
SPDG ++ +G++D +W V P I LKGH V +V + + +ASDD T
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDPI-ILKGHDFEVTAVDWSPSEIGKVATASDDFT 405
Query: 257 IKLWD 271
++LW+
Sbjct: 406 VRLWN 410
Score = 35.9 bits (79), Expect = 0.016
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Frame = +2
Query: 176 GHANFVNSVSGARRGPELLVSAS-DDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEK 352
GH + NS S + SA+ +NT K AR R+ +A +++ + + S + D+
Sbjct: 94 GHVSLFNSSS-----KKFASSATHQENTEK---ARFRDWIAHYNAIFDI-SWIKGDSC-- 142
Query: 353 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL-SLSWDGAYLLSNSMD 499
+L++ D IK+WD+ N+ + + GHT TV + S + L+S S D
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRD 192
Score = 31.1 bits (67), Expect = 0.46
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +2
Query: 224 ELLVSASDDNTIKLWDARKR--NPVASFDSSYPVTSVLFNDTA-EKILSSGVDNVIKMWD 394
E ++S S D +W K +P+ + VT+V ++ + K+ ++ D +++W+
Sbjct: 351 EYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWN 410
Query: 395 IRNN 406
I NN
Sbjct: 411 IENN 414
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 48.4 bits (110), Expect = 3e-06
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 9/161 (5%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H A+ L + + LY+ + D T+ VW + ++ + H + VNSV ++
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEA--IV 262
Query: 233 VSASDDNTIKLWDARKRNPVASF-------DSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
S S D T+K W ++ VT++ + + D ++ W
Sbjct: 263 FSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFW 322
Query: 392 DIRNNQISLK--IKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
+ R Q++ +KGH V L L G+ + S S D T+
Sbjct: 323 E-REKQLNYGGILKGHKLAV--LCLEVAGSLVFSGSADKTI 360
Score = 42.3 bits (95), Expect = 2e-04
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 1/167 (0%)
Frame = +2
Query: 14 VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTGTRIKKLKGHANF 190
V+ + K ++G + + S G ++TG D + VW V P + K G
Sbjct: 120 VWKNLKEFSAFKCNSGLVKAIVIS--GEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPT 177
Query: 191 VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGV 370
+ + A P V T LW + D+ V+ + ND + S+
Sbjct: 178 LKDIFKASLKPRNYVEVKKHRT-ALW-------IKHADA---VSCLSLNDEQGLLYSASW 226
Query: 371 DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
D IK+W I +++ I H D V + +S A + S S D T++
Sbjct: 227 DRTIKVWRIADSKCLESIPAHDDAVNSV-VSTTEAIVFSGSADGTVK 272
Score = 38.3 bits (85), Expect = 0.003
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRIKKLKGHANFVN--SVSG 208
++KGH A+ LC GS +++G+ D T+ VW D T + L GH V +V
Sbjct: 333 ILKGHKLAV--LCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEA 390
Query: 209 ARRGPE------LLVSASDDNTIKLW 268
R E ++ S S D ++K+W
Sbjct: 391 DREASERRDKKWIVYSGSLDKSVKVW 416
Score = 29.5 bits (63), Expect = 1.4
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 1/139 (0%)
Frame = +2
Query: 101 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 280
LYTG+ + VW +K+ V E + + D I++W
Sbjct: 109 LYTGSDSKNIRVWK-----NLKEFSAFKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSP 163
Query: 281 RNP-VASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLS 457
+N + + P +F + + N + +++ ++ +L IK H D V+ LS
Sbjct: 164 KNQSLHKRSGTLPTLKDIFKASLKP------RNYV---EVKKHRTALWIK-HADAVSCLS 213
Query: 458 LSWDGAYLLSNSMDNTLRI 514
L+ + L S S D T+++
Sbjct: 214 LNDEQGLLYSASWDRTIKV 232
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 48.0 bits (109), Expect = 4e-06
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = +2
Query: 83 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG-HANFVNSVSGARRGPELLVSASDDNTI 259
S D L +G + + VA++D+ GTR++ H +N V + P L ++S D +
Sbjct: 550 STDQLFLASGYSKD-VALYDIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATSSFDKDV 608
Query: 260 KLWDARKR--NPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIK 385
KLWD R+ P + S+ V F+ +L+S VDN ++
Sbjct: 609 KLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVR 652
Score = 34.7 bits (76), Expect = 0.037
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 14/149 (9%)
Frame = +2
Query: 89 DGSHLYTGATDNTVAVWDVPTGTRIKKL--KGHANFVNSVSGARRGPELLVSASDDNTIK 262
D S + G D V V + +G + + G + + + + P ++++ S + ++K
Sbjct: 454 DPSLMVFGTLDGEVVVLNHESGKIFRYIPSNGSQSTILGLCWLKIYPSMVIAGSANGSLK 513
Query: 263 LWDARKRNPVAS-----------FDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI-RNN 406
L+D +K + + FD +TSV N T + L+SG + ++DI R
Sbjct: 514 LYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGYSKDVALYDIGRGT 573
Query: 407 QISLKIKGHTDTVTGLSLSWDGAYLLSNS 493
++ + H + + + S +L + S
Sbjct: 574 RLQVFANMHQEHINVVKFSNHSPFLFATS 602
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 130
+W++ + T + +CFSPD +L A DN V
Sbjct: 610 LWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEV 651
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Frame = +2
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAEKILS-SGVDNVIKMWD 394
+L +++ + L+D + + F + + + V F++ + + + S D +K+WD
Sbjct: 553 QLFLASGYSKDVALYDIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATSSFDKDVKLWD 612
Query: 395 IRNN-QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
+R T + S D YLL++++DN +R
Sbjct: 613 LRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVR 652
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 47.6 bits (108), Expect = 5e-06
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP---------TGTR--IKKLKGHANFVNS 199
H + FSPDG TG D ++ +++VP T R I+ HA +N
Sbjct: 30 HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEPIND 89
Query: 200 VSGARRGPELLVSASDDNTIKLWDARK---RNPVASFDSSYPVTSVLFNDTAEKILSSGV 370
+ R +L+S++ DN IK +D K + F ++ V S+ F+ + E +L +G
Sbjct: 90 LDFHPRS-TILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLL-AGT 147
Query: 371 DNVI-KMWDIRNNQISLKI----KGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D+ I ++D+ Q L G + + + S G+ ++ S D +R+
Sbjct: 148 DHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRL 200
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = +2
Query: 56 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK----GHANFVNSVSGARRGP 223
T + + F P G L G ++DV T G + +N V + G
Sbjct: 128 THNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTG- 186
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSY---PVTSVLFNDTAEKILSSGVDNVIKMWD 394
+ ++AS D I+L+D V S +++ VTS +F +LSSG D+ +K+W+
Sbjct: 187 SIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWE 246
Query: 395 IRNNQI 412
I + ++
Sbjct: 247 IGSGRM 252
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELLVSASD-DN 253
F+ D + + D+TV +W++ +G +K+ G + S + E ++S + N
Sbjct: 226 FTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASN 285
Query: 254 TIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKI-LSSGVDNVIKMW 391
+ WDAR + VA + S++ + + E + ++ G+D I+ W
Sbjct: 286 EVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFW 333
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 47.6 bits (108), Expect = 5e-06
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP---------TGTR--IKKLKGHANFVNS 199
H + FSPDG TG D ++ +++VP T R I+ HA +N
Sbjct: 122 HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEPIND 181
Query: 200 VSGARRGPELLVSASDDNTIKLWDARK---RNPVASFDSSYPVTSVLFNDTAEKILSSGV 370
+ R +L+S++ DN IK +D K + F ++ V S+ F+ + E +L +G
Sbjct: 182 LDFHPRS-TILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLL-AGT 239
Query: 371 DNVI-KMWDIRNNQISLKI----KGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
D+ I ++D+ Q L G + + + S G+ ++ S D +R+
Sbjct: 240 DHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRL 292
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = +2
Query: 56 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK----GHANFVNSVSGARRGP 223
T + + F P G L G ++DV T G + +N V + G
Sbjct: 220 THNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTG- 278
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSY---PVTSVLFNDTAEKILSSGVDNVIKMWD 394
+ ++AS D I+L+D V S +++ VTS +F +LSSG D+ +K+W+
Sbjct: 279 SIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWE 338
Query: 395 IRNNQI 412
I + ++
Sbjct: 339 IGSGRM 344
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELLVSASD-DN 253
F+ D + + D+TV +W++ +G +K+ G + S + E ++S + N
Sbjct: 318 FTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASN 377
Query: 254 TIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKI-LSSGVDNVIKMW 391
+ WDAR + VA + S++ + + E + ++ G+D I+ W
Sbjct: 378 EVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFW 425
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 47.6 bits (108), Expect = 5e-06
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAV-WDVPTGTR--IKKLKGHANFVNSVSGA 211
V GH + + FSP + + D++ + WD TGT K K H ++ V
Sbjct: 287 VYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWN 346
Query: 212 RRGPELLVSASDDNTIKLWDARK------RNPVASFDS-SYPVTSVLFN-DTAEKILSSG 367
L+++ S DNT++L+D RK +P+ F+ V V ++ D + SS
Sbjct: 347 PHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSA 406
Query: 368 VDNVIKMWD 394
D ++ +WD
Sbjct: 407 EDGLLNIWD 415
Score = 38.3 bits (85), Expect = 0.003
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
Frame = +2
Query: 176 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSY--PVTSVLFNDTA 346
GH + V V+ + + S DD+ + LWDAR NPV + ++ + V +N
Sbjct: 290 GHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHD 349
Query: 347 EK-ILSSGVDNVIKMWDIRN---NQIS---LKIKGHTDTVTGLSLSWDGAYLLSNSMDNT 505
+ IL+ DN ++++D R N + K +GH V + S D + + +S ++
Sbjct: 350 DNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDG 409
Query: 506 L 508
L
Sbjct: 410 L 410
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 47.6 bits (108), Expect = 5e-06
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG----TRIKKLKGHANFVNSVSGA 211
+K H A+ + S +G+ +YTG+ D + VW PTG T + L+ H + VN+++
Sbjct: 231 IKAHDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALN 289
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSY----PVTSVLFNDTAEKILSSGVDNV 379
G +L S S D +I +W+ + + + LFN ++ +LS D
Sbjct: 290 DDG-SVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFN-VSDLLLSGSADRT 347
Query: 380 IKMW----DIRNNQISLKIKGHTDTVTGLS 457
+++W D + + + + GHT V L+
Sbjct: 348 VRIWRRGPDSSYSCLEV-LSGHTKPVKSLA 376
Score = 47.2 bits (107), Expect = 7e-06
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW---DVPTGTRIK-KLKGHANFVNSV 202
V ++ H A+ L + DGS L++G+ D ++ VW D ++ L+GH + S+
Sbjct: 273 VATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL 332
Query: 203 SGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDT 343
+LL+S S D T+++W +R P DSSY VL T
Sbjct: 333 FNV---SDLLLSGSADRTVRIW---RRGP----DSSYSCLEVLSGHT 369
Score = 37.9 bits (84), Expect = 0.004
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Frame = +2
Query: 230 LVSASDDNTIKLW---DARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW--- 391
+ S S D T+K+W D R + + + D + +V N T + + D I++W
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGT---VYTGSADRRIRVWAKP 264
Query: 392 -DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ + + ++ H V L+L+ DG+ L S S D ++ +
Sbjct: 265 TGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILV 306
Score = 32.3 bits (70), Expect = 0.20
Identities = 34/153 (22%), Positives = 64/153 (41%)
Frame = +2
Query: 56 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 235
+G + + FS G ++T D + VW KL + + + L
Sbjct: 125 SGTVKSVGFS--GEKIFTAHQDGKIGVW---------KLTAKSGYKQLTTLPTLNDRLRR 173
Query: 236 SASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIS 415
A N +++ +KR + D+ VT++ +D I S D +K+W + +
Sbjct: 174 FALPKNYVQVRRHKKRLWIEHADA---VTALAVSDGF--IYSVSWDKTLKIWRASDLRCK 228
Query: 416 LKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
IK H D V +++S +G + + S D +R+
Sbjct: 229 ESIKAHDDAVNAIAVSTNGT-VYTGSADRRIRV 260
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 47.2 bits (107), Expect = 7e-06
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 24/181 (13%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG-----HANFVNSVSG 208
++ H G I + FSPD L + D + VW+V + +G H + S
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECEIMSMNEGSLTPIHPSMSGSTDK 466
Query: 209 ARRGPELLVSASDDNTIKLWDARKRN------------------PVASFDSSYPVTSVLF 334
+ G VS K ++K N P+ SF L
Sbjct: 467 SSEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSDKPICSFTGHLDDVLDLS 526
Query: 335 NDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLR 511
++ +LSS +D +++WDI Q LK+ H D VT + + D Y +S S+D +R
Sbjct: 527 WSRSQLLLSSSMDKTVRLWDI-ETQSCLKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIR 585
Query: 512 I 514
I
Sbjct: 586 I 586
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 47.2 bits (107), Expect = 7e-06
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
GH G + LCF + L++G+ D T+++W+ T I+ GH + + S+ G E
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDAL--GRER 318
Query: 230 LVSASDDNTIKLW 268
++S D T++L+
Sbjct: 319 VLSVGRDRTMQLY 331
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 47.2 bits (107), Expect = 7e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +2
Query: 62 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK---LKGHANFVNSVSGARRGPEL- 229
++ ++ +SPDGS + + V ++ G +++ + H VN +S + +L
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLC 478
Query: 230 LVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMWDIR 400
+++ DD TIK+WDA +F+ PV SV + + + I S+ +D IK W
Sbjct: 479 VITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 401 NNQISLKIKGHTDTVTGLSLSWDGAYLLS 487
N + T ++ S DG L S
Sbjct: 539 NMGSRVDYDAPGRWCTTMAYSADGTRLFS 567
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Frame = +2
Query: 233 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILSSGVDN-VIKMWDIRNN 406
V ++ I L++ +A+F P + L F+ I++ G+D+ I+++++R +
Sbjct: 850 VMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVD 909
Query: 407 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
++ K+KGH+ +TGL+ S L+S+ D L
Sbjct: 910 EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQL 943
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV-SGARRGP 223
H G + + FS L T D T+ VWD TG + +GH V SV +
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 224 ELLVSASDDNTIKLW 268
+ + S + D IK W
Sbjct: 521 QFIFSTALDGKIKAW 535
Score = 31.1 bits (67), Expect = 0.46
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Frame = +2
Query: 74 LCFSPDGSHLYTGAT----DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 241
+ +S DG+ L++ T ++ + W+ G + +G V ++A
Sbjct: 556 MAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAA 615
Query: 242 SDDNTIKLWDARKRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKM 388
DD +IK WD + + D + + + FN + SG +NVIK+
Sbjct: 616 GDDFSIKFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSLLAVSGNENVIKI 667
Score = 30.3 bits (65), Expect = 0.80
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 74 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 250
L F P D + + G D+T+ +++V KLKGH+ + ++ + +LVS+ D
Sbjct: 882 LAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS-NVLNVLVSSGAD 940
Query: 251 NTIKLWD 271
+ +W+
Sbjct: 941 AQLCVWN 947
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
++ DD+TI++++ R + S +T + F++ ++SSG D + +W+
Sbjct: 891 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 47.2 bits (107), Expect = 7e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +2
Query: 62 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK---LKGHANFVNSVSGARRGPEL- 229
++ ++ +SPDGS + + V ++ G +++ + H VN +S + +L
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLC 478
Query: 230 LVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMWDIR 400
+++ DD TIK+WDA +F+ PV SV + + + I S+ +D IK W
Sbjct: 479 VITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 401 NNQISLKIKGHTDTVTGLSLSWDGAYLLS 487
N + T ++ S DG L S
Sbjct: 539 NMGSRVDYDAPGRWCTTMAYSADGTRLFS 567
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Frame = +2
Query: 233 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILSSGVDN-VIKMWDIRNN 406
V ++ I L++ +A+F P + L F+ I++ G+D+ I+++++R +
Sbjct: 850 VMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVD 909
Query: 407 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
++ K+KGH+ +TGL+ S L+S+ D L
Sbjct: 910 EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQL 943
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV-SGARRGP 223
H G + + FS L T D T+ VWD TG + +GH V SV +
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 224 ELLVSASDDNTIKLW 268
+ + S + D IK W
Sbjct: 521 QFIFSTALDGKIKAW 535
Score = 31.1 bits (67), Expect = 0.46
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Frame = +2
Query: 74 LCFSPDGSHLYTGAT----DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 241
+ +S DG+ L++ T ++ + W+ G + +G V ++A
Sbjct: 556 MAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAA 615
Query: 242 SDDNTIKLWDARKRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKM 388
DD +IK WD + + D + + + FN + SG +NVIK+
Sbjct: 616 GDDFSIKFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSLLAVSGNENVIKI 667
Score = 30.3 bits (65), Expect = 0.80
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 74 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 250
L F P D + + G D+T+ +++V KLKGH+ + ++ + +LVS+ D
Sbjct: 882 LAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS-NVLNVLVSSGAD 940
Query: 251 NTIKLWD 271
+ +W+
Sbjct: 941 AQLCVWN 947
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
++ DD+TI++++ R + S +T + F++ ++SSG D + +W+
Sbjct: 891 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 46.8 bits (106), Expect = 9e-06
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 208
+NV+ ++ H A+ L + + LY+G+ D T+ VW + ++ ++ H + +N+V
Sbjct: 241 KNVLKIR-HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTV-- 297
Query: 209 ARRGPELLVSASDDNTIKLWDARKRNPVAS-------FDSSYPVTSVLFNDTAEKILSSG 367
A +LL + S D T+K+W + VT++ N TA +
Sbjct: 298 AAGFDDLLFTGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGS 357
Query: 368 VDNVIKMWDIRNN-QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
D + W+ + ++GH V L L+ G+ +LS D +
Sbjct: 358 SDGTVNFWEGQKYLSHGGTLRGHRLAV--LCLAAAGSLVLSGGADKNI 403
Score = 38.3 bits (85), Expect = 0.003
Identities = 33/156 (21%), Positives = 70/156 (44%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 226
K +G + + + D + ++TG D + VW G+ K+ G + + S+ +
Sbjct: 173 KSTSGLVKAIVITGD-NRIFTGHQDGKIRVW---RGS--KRRTGGYSRIGSLPTLKEF-- 224
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 406
L S + N +++ R+R V V+ + N+ + S D +K+W + ++
Sbjct: 225 LTKSVNPKNYVEV---RRRKNVLKIRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDS 281
Query: 407 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ I+ H D + ++ +D L + S D TL++
Sbjct: 282 KCLESIQAHDDAINTVAAGFDD-LLFTGSADGTLKV 316
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 139
++GH A+ LC + GS + +G D + VW
Sbjct: 377 LRGHRLAV--LCLAAAGSLVLSGGADKNICVW 406
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +2
Query: 230 LVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNN 406
+V+AS D +I D VA ++++ + L N T I S +K+WD R
Sbjct: 9 IVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIWDTRQR 68
Query: 407 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
S + H D ++G++ + D L+ S D TL +
Sbjct: 69 SCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSV 104
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/128 (21%), Positives = 63/128 (49%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
GH+G I+ + +S + + L + + DN+V +W + + + H N+V SV +
Sbjct: 354 GHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLG-IFSHNNYVTSVQFNPVDDDH 411
Query: 230 LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 409
+S S D +++W A + V D+ VT+V + + ++ + + + +++ +
Sbjct: 412 FISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNVSGH- 470
Query: 410 ISLKIKGH 433
L++ GH
Sbjct: 471 -CLQLDGH 477
Score = 36.7 bits (81), Expect = 0.009
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 169
++ H GAI+ + FSPDG +L + D + VW V R ++
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEE 288
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 83 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP-ELLVSASDDNTI 259
S D S + + D+ V + + + K KG N N +S + + +VSA DD+++
Sbjct: 502 STDPSRVMVASADSQVRI--ISGRNVVHKYKGSRNAGNQISASFTADGKHIVSACDDSSV 559
Query: 260 KLWDARKRNPVASFDSSYPVTSVLFNDTAEK 352
+W+ +P S + T L + EK
Sbjct: 560 YVWNCVGHDPEQSSPGFFSHTKRLKIRSFEK 590
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/128 (21%), Positives = 63/128 (49%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 229
GH+G I+ + +S + + L + + DN+V +W + + + H N+V SV +
Sbjct: 354 GHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLG-IFSHNNYVTSVQFNPVDDDH 411
Query: 230 LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 409
+S S D +++W A + V D+ VT+V + + ++ + + + +++ +
Sbjct: 412 FISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNVSGH- 470
Query: 410 ISLKIKGH 433
L++ GH
Sbjct: 471 -CLQLDGH 477
Score = 36.7 bits (81), Expect = 0.009
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 169
++ H GAI+ + FSPDG +L + D + VW V R ++
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEE 288
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 83 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP-ELLVSASDDNTI 259
S D S + + D+ V + + + K KG N N +S + + +VSA DD+++
Sbjct: 498 STDPSRVMVASADSQVRI--ISGRNVVHKYKGSRNAGNQISASFTADGKHIVSACDDSSV 555
Query: 260 KLWDARKRNPVASFDSSYPVTSVLFNDTAEK 352
+W+ +P S + T L + EK
Sbjct: 556 YVWNCVGHDPEQSSPGFFSHTKRLKIRSFEK 586
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Frame = +2
Query: 74 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS---------GARRGPE 226
L S DG +L G + ++D+ + H + S+S +
Sbjct: 391 LAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFSFPVLTNVDSENASS 450
Query: 227 LLVSASDDNTIKLWDARKR-NPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 403
LL S I ++D ++ +PV S S VTSV F K+L+SG D ++M+D+
Sbjct: 451 LLASGGKGRAIHIYDVKRNFDPVGSVCGSAAVTSVKFACNGRKMLTSGADR-LQMFDVNR 509
Query: 404 NQISLKIK-GHTDTVT 448
S+++ HT T++
Sbjct: 510 KASSVRLSPSHTQTLS 525
Score = 33.5 bits (73), Expect = 0.086
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG-HANFVNSVS 205
E V GH A+ + F PD H+ + A+D + VW +P + ++ + N +V+
Sbjct: 603 ELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVWKLPLRMATRIIRAVNENGRLTVA 662
Query: 206 GARRGPELLVSASDDN 253
+ ++ V +DN
Sbjct: 663 QLEKFKQIAVDLEEDN 678
Score = 30.7 bits (66), Expect = 0.61
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +2
Query: 227 LLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
L+V+ D I ++D V SF D PV V+ + + ++ S + I D
Sbjct: 540 LVVTVGQDKKINIFDIESGKLVRSFKQDRDHGDPV-KVILDPSCNYLVCSYSNRTICFVD 598
Query: 395 IRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
++ + GH + VTG+ D +++S + D +
Sbjct: 599 FVTGELVAQATGHGEAVTGVIFLPDCKHIISVASDGCI 636
Score = 27.1 bits (57), Expect = 7.5
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 7/138 (5%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHT-----GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 169
+++V + +V + HT G I + P + T D + ++D+ +G ++
Sbjct: 504 MFDVNRKASSVRLSPSHTQTLSHGTIYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRS 563
Query: 170 LKGHANFVNSVSGARRGP-ELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDT 343
K + + V LV + + TI D VA VT V+F
Sbjct: 564 FKQDRDHGDPVKVILDPSCNYLVCSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLPD 623
Query: 344 AEKILSSGVDNVIKMWDI 397
+ I+S D I +W +
Sbjct: 624 CKHIISVASDGCIFVWKL 641
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 236 SASDDNTIKLWD-ARKRNPVASFDSSYPVTS 325
+ S+D TI+LWD A + NP+ + SS P S
Sbjct: 330 TCSEDGTIRLWDLAFQVNPLEANASSNPSES 360
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 244
I + P ++T A D+ WDV +G KGH++++++V +R +++ S
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVV-SRSSASQILTGS 220
Query: 245 DDNTIKLWDARKRNPVASFDS----SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQI 412
+D T ++WD + V S S S + D +E L G + +W++ ++
Sbjct: 221 EDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQGKNLALWNLPASEC 280
Query: 413 --SLKIKGHTDTV 445
++ I H V
Sbjct: 281 VQTIPIPAHVQDV 293
Score = 44.8 bits (101), Expect = 3e-05
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL--KGHANFVNSVSGA 211
M KGH+ + + S + TG+ D T +WD TG +K + + + + S A
Sbjct: 195 MTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMA 254
Query: 212 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
G E + + LW+ V + V V+F++ ++IL+ G + +++ +
Sbjct: 255 LDGSESWLVCGQGKNLALWNLPASECVQTIPIPAHVQDVMFDE--KQILTVGAEPLLRRF 312
Query: 392 DIRNNQIS 415
D+ +S
Sbjct: 313 DLNGALLS 320
Score = 35.5 bits (78), Expect = 0.021
Identities = 16/86 (18%), Positives = 41/86 (47%)
Frame = +2
Query: 257 IKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHT 436
++L + + + P + + ++ + + + ++ D+ WD+ + +I + KGH+
Sbjct: 142 LELINPQHKGPWGALSPMPEINAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHS 201
Query: 437 DTVTGLSLSWDGAYLLSNSMDNTLRI 514
D + + + +L+ S D T RI
Sbjct: 202 DYLHTVVSRSSASQILTGSEDGTARI 227
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 46.0 bits (104), Expect = 2e-05
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +2
Query: 62 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK---LKGHANFVNSVSGARRGPELL 232
++ ++ +SPDGS + + V ++ G +++ + H VN ++ + +L
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLC 478
Query: 233 VSA-SDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMWDIR 400
V+ DD TIK+WDA +F+ PV S+ + + + I S+ +D IK W
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 401 NNQISLKIKGHTDTVTGLSLSWDGAYLLS 487
N + + T ++ S DG L S
Sbjct: 539 NMGSRVDYEAPGRWCTTMAYSADGTRLFS 567
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Frame = +2
Query: 233 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILSSGVDN-VIKMWDIRNN 406
V ++ I L++ +A+F P + L F+ I++ G+D+ I+++++R +
Sbjct: 839 VMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVD 898
Query: 407 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
++ K+KGH+ +TGL+ S L+S+ D L
Sbjct: 899 EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQL 932
Score = 37.5 bits (83), Expect = 0.005
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLY--TGATDNTVAVWDVPTGTRIKKLKGHANFVNSV-SGARRGP 223
H G + + FS L T D T+ VWD TG + +GH V S+ +
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENI 520
Query: 224 ELLVSASDDNTIKLW 268
+ + S + D IK W
Sbjct: 521 QFIFSTALDGKIKAW 535
Score = 30.3 bits (65), Expect = 0.80
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 74 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 250
L F P D + + G D+T+ +++V KLKGH+ + ++ + +LVS+ D
Sbjct: 871 LAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS-NVLNVLVSSGAD 929
Query: 251 NTIKLWD 271
+ +W+
Sbjct: 930 AQLCVWN 936
Score = 29.5 bits (63), Expect = 1.4
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Frame = +2
Query: 74 LCFSPDGSHLYTGAT----DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 241
+ +S DG+ L++ T ++ + W+ G + +G V ++A
Sbjct: 556 MAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAA 615
Query: 242 SDDNTIKLWDARKRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKM 388
DD +IK WD + + D+ + + + FN + S DN+IK+
Sbjct: 616 GDDFSIKFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMIKV 667
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
++ DD+TI++++ R + S +T + F++ ++SSG D + +W+
Sbjct: 880 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 46.0 bits (104), Expect = 2e-05
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +2
Query: 62 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK---LKGHANFVNSVSGARRGPELL 232
++ ++ +SPDGS + + V ++ G +++ + H VN ++ + +L
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLC 478
Query: 233 VSA-SDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMWDIR 400
V+ DD TIK+WDA +F+ PV S+ + + + I S+ +D IK W
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 401 NNQISLKIKGHTDTVTGLSLSWDGAYLLS 487
N + + T ++ S DG L S
Sbjct: 539 NMGSRVDYEAPGRWCTTMAYSADGTRLFS 567
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Frame = +2
Query: 233 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILSSGVDN-VIKMWDIRNN 406
V ++ I L++ +A+F P + L F+ I++ G+D+ I+++++R +
Sbjct: 839 VMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVD 898
Query: 407 QISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
++ K+KGH+ +TGL+ S L+S+ D L
Sbjct: 899 EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQL 932
Score = 37.5 bits (83), Expect = 0.005
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLY--TGATDNTVAVWDVPTGTRIKKLKGHANFVNSV-SGARRGP 223
H G + + FS L T D T+ VWD TG + +GH V S+ +
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENI 520
Query: 224 ELLVSASDDNTIKLW 268
+ + S + D IK W
Sbjct: 521 QFIFSTALDGKIKAW 535
Score = 30.3 bits (65), Expect = 0.80
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 74 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 250
L F P D + + G D+T+ +++V KLKGH+ + ++ + +LVS+ D
Sbjct: 871 LAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS-NVLNVLVSSGAD 929
Query: 251 NTIKLWD 271
+ +W+
Sbjct: 930 AQLCVWN 936
Score = 29.5 bits (63), Expect = 1.4
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Frame = +2
Query: 74 LCFSPDGSHLYTGAT----DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 241
+ +S DG+ L++ T ++ + W+ G + +G V ++A
Sbjct: 556 MAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAA 615
Query: 242 SDDNTIKLWDARKRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKM 388
DD +IK WD + + D+ + + + FN + S DN+IK+
Sbjct: 616 GDDFSIKFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMIKV 667
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
++ DD+TI++++ R + S +T + F++ ++SSG D + +W+
Sbjct: 880 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 45.6 bits (103), Expect = 2e-05
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRGPEL 229
H A+ L S DG+ LY+ + D T+ +W ++ H + +N+V+ + G
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-- 221
Query: 230 LVSASDDNTIKLW----------DARKRNPVASF-DSSYPVTSVLFNDTAEKIL-SSGVD 373
+ + S D IK+W RK + VA + + + ++ + T +L S G D
Sbjct: 222 IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSD 281
Query: 374 NVIKMW---DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
I +W D + + ++GHT++V L++ D L S S D T+R+
Sbjct: 282 GSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSD--ILCSGSADKTVRL 329
Score = 44.4 bits (100), Expect = 5e-05
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Frame = +2
Query: 92 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASD-------D 250
G LYTG+ D V +W+ T + + + + + G + LV +D D
Sbjct: 48 GKRLYTGSNDGVVRLWNANTLETLAEASSNGDVITGERGGGGAVKSLVILADKLFTAHQD 107
Query: 251 NTIKLWDARK--RNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKI 424
+ I++W V + T +D K L N + +IR ++ + +
Sbjct: 108 HKIRVWKINDVVEEDVGGKKYMHLATMPTISDRFAKCLMP--KNQV---EIRRHKKASWV 162
Query: 425 KGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
H D V+GL+LS DG L S S D TL+I
Sbjct: 163 H-HVDAVSGLALSRDGTLLYSVSWDRTLKI 191
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFS-PDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNSV 202
V ++ H I L S +GS L++G +D ++ VW+ G I L+GH V +
Sbjct: 252 VAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCL 311
Query: 203 SGARRGPELLVSASDDNTIKLW--DARKRNPVASFDSSY-PVTSVL--FNDTAEK----- 352
+ ++L S S D T++LW A+ + +A + PV + F D+ +
Sbjct: 312 AVVS---DILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSRKADEASY 368
Query: 353 -ILSSGVDNVIKMWDI 397
I S G+D+ +K+W +
Sbjct: 369 HIYSGGLDSQVKVWQV 384
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
++++ + + ++GHT + + F DG + T TD + +W V G I+ +GH
Sbjct: 96 VYDIRKLVDPALTLQGHTKTVSYVRFL-DGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHV 154
Query: 185 NFVNSVS-GARRGPELLVSASDDNTIKLWDARKRNPV 292
N N V R L S++N + ++D R PV
Sbjct: 155 NNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPV 191
Score = 32.7 bits (71), Expect = 0.15
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = +2
Query: 218 GPELLVSASDDNTIKLWDARKR-NPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 391
GP + V +D ++D RK +P + + V+ V F D ++++G D +K+W
Sbjct: 82 GPAVAVGCADRKGY-VYDIRKLVDPALTLQGHTKTVSYVRFLDGGT-VVTAGTDGCLKLW 139
Query: 392 DIRNNQISLKIKGHTD--TVTGLSLSWDGAYLLSNSMDN 502
+ + ++ +GH + GLS+ +GA S +N
Sbjct: 140 SVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENN 178
Score = 28.3 bits (60), Expect = 3.2
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Frame = +2
Query: 197 SVSGARRGPELLVSAS--DDNTIKLWDARKRNPVASFDSSYP-------VTSVLFNDTAE 349
SV R G V AS DD T+++WD R P S P V V F+ +
Sbjct: 24 SVDYTRHGGASTVGASGSDDGTMQVWDPR-CPPEESVGVVRPAGICRSAVCCVEFDPSGG 82
Query: 350 KILSSG-VDNVIKMWDIRN-NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
++ G D ++DIR +L ++GHT TV+ + DG +++ D L++
Sbjct: 83 PAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSYVRF-LDGGTVVTAGTDGCLKL 138
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 45.6 bits (103), Expect = 2e-05
Identities = 30/106 (28%), Positives = 48/106 (45%)
Frame = +2
Query: 77 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 256
C + +Y+G+ D T+ VW + ++ +K H + +N G G + SAS D
Sbjct: 179 CLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAIN---GLVAGDGRVYSASADGK 235
Query: 257 IKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
+K+W KR + S SS VL T E V++V+ D
Sbjct: 236 VKIWGKEKRKQIESTSSSSSSLHVL-KATLEGRAEVSVNSVVVSGD 280
Score = 30.7 bits (66), Expect = 0.61
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPD----GSHLYTGATDNTVAVWDVPTGTRIKKLK 175
V+ GH G + L SP+ G LY+G D ++ VW VP +++ K
Sbjct: 356 VIHGHEGPVKCLQASPNNVGAGFMLYSGGLDKSLRVWWVPKQDNLEEKK 404
Score = 30.3 bits (65), Expect = 0.80
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 2/169 (1%)
Frame = +2
Query: 14 VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFV 193
+ G + + V+ H G++ L G L + + + VW P K G +
Sbjct: 47 ITGAYKPLAVLSAHVGSVSSLALC--GEFLLSASQGKDIIVWQQPDLKIFAKF-GQGD-- 101
Query: 194 NSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD--SSYPVTSVLFNDTAEKILSSG 367
SV + +A D+ I++W +RN +F + P T D K +
Sbjct: 102 GSVKALVSVGSKVFTAHQDSRIRVWKVSRRNSENAFRLVDTLPTT----KDYLGKFMKQ- 156
Query: 368 VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
N ++ R N L I+ H D+++ L++ + S S D TL++
Sbjct: 157 -SNYVQ---TRRNHKRLWIE-HADSISCLAV--HAGIIYSGSWDKTLKV 198
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 353 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
I S D +K+W + + + IK H D + GL ++ DG + S S D ++I
Sbjct: 187 IYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGL-VAGDGR-VYSASADGKVKI 238
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 45.6 bits (103), Expect = 2e-05
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 220
+++ H + L S D + L +G+ D+ V ++ P+G + + ++ G
Sbjct: 57 ILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSG 116
Query: 221 PELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDI 397
LL +A DD IKL + + V PVT + F+ E + S + W++
Sbjct: 117 -SLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWEL 175
Query: 398 RNNQISLKIKG 430
+N +S +KG
Sbjct: 176 QNGVVSFTLKG 186
Score = 42.3 bits (95), Expect = 2e-04
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 6/159 (3%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWD-VPTGTRIKK-LKGHANFVNSVSGARRG 220
G + A + + H T ++ D +++V D + T T L+ H + V S++
Sbjct: 15 GGSAAFCSILWDHKAEHFVTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLA-LSND 73
Query: 221 PELLVSASDDNTIKLW---DARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
LL S S D+ +KL+ + + F + P+ + FN + + ++G D IK+
Sbjct: 74 STLLASGSIDHCVKLYKFPSGEFQTNITRF--TLPIRVLAFNGSGSLLAAAGDDEGIKLI 131
Query: 392 DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
+ + I +KGH VTGL +G L S T+
Sbjct: 132 NTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTV 170
Score = 41.9 bits (94), Expect = 2e-04
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA---NFVNSVS 205
V V+KGH G + L F P+G L + T TV W++ G LKG A F S+
Sbjct: 139 VRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIV 198
Query: 206 GARR-GPE--LLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSGV 370
R P+ L N + ++D + + D + + + + I +SG+
Sbjct: 199 NIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGL 258
Query: 371 DNVIKMWDIRNNQ 409
D + +WD+ Q
Sbjct: 259 DKQVLLWDVDKKQ 271
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/104 (28%), Positives = 47/104 (45%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
FS DG L + D+TV + D TG +K L GH V E++ S S D +
Sbjct: 114 FSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEV 173
Query: 260 KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
+LW+ + S P+ S+ F+ E +L+ + + MW
Sbjct: 174 RLWNTTTSECIRSHLFYRPIASIAFHAEGE-LLAVASGHKLHMW 216
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 45.2 bits (102), Expect = 3e-05
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 9/170 (5%)
Frame = +2
Query: 5 IWNVYGQCEN---VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK-- 169
IW++ C + ++ K ++ ++ +SPDG+ + T + + ++ +++
Sbjct: 388 IWDM-SNCSHQFQALIAKETPISVTRVAWSPDGNFIGVAFTKHLIQLYAFSGPNDLRQHT 446
Query: 170 -LKGHANFVNSVSGARRGPEL-LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL--FN 337
+ H VN ++ A +L +++ DD IK+WD R PV S+ +
Sbjct: 447 EIDAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRKHFTFEGHDAPVYSICPHYK 506
Query: 338 DTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLS 487
+ + I S+ +D IK W N + T + S DG L S
Sbjct: 507 ENIQFIFSTAIDGKIKAWLYDNLGSRVDYDAPGKWCTRMLYSADGTRLFS 556
Score = 35.9 bits (79), Expect = 0.016
Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 320 TSVLFNDTAEKILSSGV-DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSM 496
T + F+ +++ G+ D+ I ++++R +++ K+KGH +TGL+ S L+S+
Sbjct: 865 TFLAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGA 924
Query: 497 D 499
D
Sbjct: 925 D 925
Score = 30.7 bits (66), Expect = 0.61
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +2
Query: 74 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 250
L F P D + + G D+T+ +++V KLKGH + ++ + +LVS+ D
Sbjct: 867 LAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFS-TALNILVSSGAD 925
Query: 251 NTIKLWDA---RKRNPVA 295
I W KR VA
Sbjct: 926 AQICFWSIDTWEKRKSVA 943
Score = 29.1 bits (62), Expect = 1.9
Identities = 28/135 (20%), Positives = 59/135 (43%), Gaps = 8/135 (5%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR-- 217
+KGH I L FS + L + D + W + T + K + + +G R
Sbjct: 900 LKGHQKRITGLAFSTALNILVSSGADAQICFWSIDTWEKRKSVAIQMPAGKAANGDTRVQ 959
Query: 218 --GPELLVSASDDNTIKLWDARKRNPVASF---DS-SYPVTSVLFNDTAEKILSSGVDNV 379
+L + + + ++DA K + + DS S P++S ++ ++ I ++ D
Sbjct: 960 FHVDQLRILVVHETQLAVFDASKMECIRQWIPQDSLSAPISSAVYACNSQLIYTTFRDGN 1019
Query: 380 IKMWDIRNNQISLKI 424
I ++D + ++ +I
Sbjct: 1020 IGVFDADSLRLRCRI 1034
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/72 (34%), Positives = 41/72 (56%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
+TG I L +S G H+YTG+ DNT+ W + G+ + + GH + V+++ +L
Sbjct: 586 YTG-IHALAYSEYG-HVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVN---GVL 640
Query: 233 VSASDDNTIKLW 268
S S D T++LW
Sbjct: 641 YSGSWDGTVRLW 652
Score = 32.3 bits (70), Expect = 0.20
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Frame = +2
Query: 317 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL--------SLSWDG 472
+ ++ +++ SG DN IK W +++ + + GH V+ L S SWDG
Sbjct: 589 IHALAYSEYGHVYTGSG-DNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGVLYSGSWDG 647
Query: 473 AYLLSNSMDNTL 508
L + DN+L
Sbjct: 648 TVRLWSLSDNSL 659
Score = 30.3 bits (65), Expect = 0.80
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 236 SASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGV-DNVIKMWDIRNNQI 412
+ S DNTIK W + + + + V S L +L SG D +++W + +N +
Sbjct: 602 TGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLV--VVNGVLYSGSWDGTVRLWSLSDNSL 659
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Frame = +2
Query: 83 SPDGSHLYTGATDNTVAVW----DVPTGTRIKKL-KGHANFVNSVSGAR-RGPELLV-SA 241
S DG + TGA D V VW D P G+R +L K V+ R P +++ S
Sbjct: 3339 SHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASG 3398
Query: 242 SDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISL 418
SDD T+ +WD + V D P++++ ND +I+++ V+ +W I + +++
Sbjct: 3399 SDDCTVIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTA-AGTVLAVWSINGDCLAV 3457
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 167 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTA 346
+ +GH V +S ++ L+SAS D T++LW + + F + VTSV FN
Sbjct: 323 EFRGHTGEVLDISWSK--DNYLLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPVN 380
Query: 347 EKILSSG-VDNVIKMWDI 397
E SG +D +++W+I
Sbjct: 381 ENYFMSGSIDGKVRIWNI 398
Score = 42.7 bits (96), Expect = 1e-04
Identities = 45/157 (28%), Positives = 70/157 (44%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
+K H GAI+ + FS DG L + D V VW V KK + + +N + P
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKV---VEDKKSRLRRDCLNEID-----P 268
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 403
+ ++ D + PV + T+ F T++ S+ V K++ I
Sbjct: 269 SCMY-------FEVNDLSQLKPVLVNEEKPKKTTESFRKTSD---SACVVFPPKVFRIME 318
Query: 404 NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ + +GHT V +S S D YLLS SMD T+R+
Sbjct: 319 KPL-YEFRGHTGEVLDISWSKDN-YLLSASMDKTVRL 353
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/52 (23%), Positives = 23/52 (44%)
Frame = +2
Query: 56 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
T ++ + DG H+ + D+ V +W + KK++ F + S A
Sbjct: 503 TRSLTSASLTSDGKHIVSACEDSNVYIWSNDEESETKKIRSFERFSANASVA 554
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H ++ L +SPD ++L +G+ DN+ +WDV G+ + L H ++V V+ + +
Sbjct: 52 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA-KYV 110
Query: 233 VSASDDNTIKLW 268
S S D T +++
Sbjct: 111 ASLSSDRTCRIY 122
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 353 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWD--GAYLLSNSMDNTLRI 514
++S VDN +WD+ + + H V G ++WD Y+ S S D T RI
Sbjct: 68 LISGSVDNSCIIWDVNKGSVHQILDAHCHYVQG--VAWDPLAKYVASLSSDRTCRI 121
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Frame = +2
Query: 350 KILSSGVDN----VIKMWDIRNNQ---ISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNT 505
++L+SG D + K+ NQ + + H V L S D AYL+S S+DN+
Sbjct: 18 ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNS 76
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H ++ L +SPD ++L +G+ DN+ +WDV G+ + L H ++V V+ + +
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA-KYV 169
Query: 233 VSASDDNTIKLW 268
S S D T +++
Sbjct: 170 ASLSSDRTCRIY 181
Score = 41.5 bits (93), Expect = 3e-04
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 19/173 (10%)
Frame = +2
Query: 53 HTGA-IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG---------HANFVNSV 202
H G ++ + F P L T D + +W + +G KK+ H VN++
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTI 70
Query: 203 SGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVL---FNDTAEKILS 361
+ G ELL S +D + +W S+ S+ VL ++ ++S
Sbjct: 71 RFSPSG-ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLIS 129
Query: 362 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWD--GAYLLSNSMDNTLRI 514
VDN +WD+ + + H V G ++WD Y+ S S D T RI
Sbjct: 130 GSVDNSCIIWDVNKGSVHQILDAHCHYVQG--VAWDPLAKYVASLSSDRTCRI 180
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 296 SFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKI 424
S+ PV +V F+ + + ++G D IK+W I + Q K+
Sbjct: 9 SWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKV 51
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H ++ L +SPD ++L +G+ DN+ +WDV G+ + L H ++V V+ + +
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA-KYV 169
Query: 233 VSASDDNTIKLW 268
S S D T +++
Sbjct: 170 ASLSSDRTCRIY 181
Score = 41.5 bits (93), Expect = 3e-04
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 19/173 (10%)
Frame = +2
Query: 53 HTGA-IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG---------HANFVNSV 202
H G ++ + F P L T D + +W + +G KK+ H VN++
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTI 70
Query: 203 SGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVL---FNDTAEKILS 361
+ G ELL S +D + +W S+ S+ VL ++ ++S
Sbjct: 71 RFSPSG-ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLIS 129
Query: 362 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWD--GAYLLSNSMDNTLRI 514
VDN +WD+ + + H V G ++WD Y+ S S D T RI
Sbjct: 130 GSVDNSCIIWDVNKGSVHQILDAHCHYVQG--VAWDPLAKYVASLSSDRTCRI 180
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 296 SFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKI 424
S+ PV +V F+ + + ++G D IK+W I + Q K+
Sbjct: 9 SWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKV 51
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 44.0 bits (99), Expect = 6e-05
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +2
Query: 221 PELLVSASDDNTIKLWDARKRNPVASF-DSSYP--VTSVLFN-DTAEKILSSGVDNVIKM 388
PELL+S +D+ ++WD RK P AS D ++ V S F+ + KIL++ DN I++
Sbjct: 325 PELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQDNRIRI 384
Query: 389 WD 394
WD
Sbjct: 385 WD 386
Score = 36.3 bits (80), Expect = 0.012
Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 17/171 (9%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHL-YTGATDNTVAVWDVPTGTRIKKLKGH------ANFVNSVSGA 211
H+ + + FSP + Y+ ++D T+ D+ TGT L + AN + G
Sbjct: 214 HSVQVNNMRFSPTNDDMVYSASSDGTIGYTDLETGTSSTLLNLNPDGWQGANSWKMLYGM 273
Query: 212 RRGPELLVSASDDNT--IKLWDARKRN----PVASFDSSYPVTSVLFNDTA-EKILSSGV 370
E V + DN + + D R N P+ V + N E +LS G
Sbjct: 274 DINSEKGVVLAADNFGFLHMIDHRTNNSTGEPILIHKQGSKVCGLDCNPVQPELLLSCGN 333
Query: 371 DNVIKMWDIRNNQ--ISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRI 514
D+ ++WD+R Q SL H V S G +L+ DN +RI
Sbjct: 334 DHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQDNRIRI 384
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 44.0 bits (99), Expect = 6e-05
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 206 GARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIK 385
GA P + + +L+D R+ ++S+ + + L + ++SS +D ++
Sbjct: 419 GASVSPSWIAAGFSSGQCRLFDLRENGFISSWRAHDGYVTKLVAPESHLLVSSSLDKTLR 478
Query: 386 MWDIRNNQI--SLKIKGHTDTVTGLSLSWDGAYLLSNSMDN 502
+WD+R + +KGH D V+G S+ W G ++S S +N
Sbjct: 479 IWDLRKSWTPQPFVVKGHNDGVSGFSI-W-GKDVISISRNN 517
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 43.6 bits (98), Expect = 8e-05
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 9/170 (5%)
Frame = +2
Query: 5 IWNVYGQCENVM---VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK-- 169
IWN+ C + ++K + ++ ++ +SPDG+ L T + + V+ G+ +++
Sbjct: 390 IWNM-AACSVIFQGSIVKEPSISVTRVAWSPDGNLLGVSFTKHLIHVYAYQ-GSDLRQHL 447
Query: 170 -LKGHANFVNSVSGARRGPEL-LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL--FN 337
+ H VN ++ A ++ +V+ DD IK+WD + PV S+
Sbjct: 448 EIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKKLFTFEGHEAPVYSICPHQK 507
Query: 338 DTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLS 487
+ + I S+ +D IK W N + T + S DG+ L S
Sbjct: 508 ENIQFIFSTALDGKIKAWLYDNVGSRVDYDAPGQWCTTMLYSADGSRLFS 557
Score = 35.9 bits (79), Expect = 0.016
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 320 TSVLFNDTAEKILSSGV-DNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSM 496
T + F+ I++ G+ D+ I ++++R +++ K+KGH +TGL+ S L+S+
Sbjct: 876 TFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGA 935
Query: 497 DNTL 508
D L
Sbjct: 936 DAQL 939
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 74 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 250
L F P D + + G D+++ +++V KLKGH + ++ + +LVS+ D
Sbjct: 878 LAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFS-TALNILVSSGAD 936
Query: 251 NTIKLWDA 274
+ W A
Sbjct: 937 AQLFFWTA 944
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 43.2 bits (97), Expect = 1e-04
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 23 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 145
+ VM +KGH A+ LCFSP+ + T + D ++ VW++
Sbjct: 278 EVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNI 318
Score = 34.3 bits (75), Expect = 0.049
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 139
+KGH A+ LCFS DG L T D + V+
Sbjct: 82 LKGHGDAVTGLCFSSDGKSLATACADGVIRVF 113
Score = 32.3 bits (70), Expect = 0.20
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 398 RNNQISLK-IKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
R++ + L +KGH D VTGL S DG L + D +R+
Sbjct: 73 RHHPLDLNTLKGHGDAVTGLCFSSDGKSLATACADGVIRV 112
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H ++ + DG+ +++G D +W + +G + + H + +++ G LL
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIP-GMNLL 129
Query: 233 VSASDDNTIKLWDARKRNPV 292
+ S D T+K WD R++NPV
Sbjct: 130 ATGSWDKTLKYWDTRQQNPV 149
Score = 27.5 bits (58), Expect = 5.7
Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
Frame = +2
Query: 62 AIMQLCFSPDGSHLYTGATDNTVAVWDVP-TGTRIKKL-KGHANFVNSV--SGARRGPEL 229
+I L FSP L + DN V W++ +G + K + V S +
Sbjct: 27 SISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86
Query: 230 LVSASDDNTIKLWDARK-RNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 400
+ S D K+W PV P+ ++ + + + D +K WD R
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTR 144
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 42.7 bits (96), Expect = 1e-04
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
+ P + +++V WD+ T ++ ++ HA+ V V + +LV+A D++ I
Sbjct: 176 WDPHDVNAVAATGESSVQFWDLRTMKKVNSIE-HAH-VRGVDYNPKREHILVTAEDESGI 233
Query: 260 KLWDARKRN-PVASFDSSYPVT-SVLFNDTAEK-ILSSGVDNVIKMW 391
+WD RK PV T +V N + ILS+G D+V+ +W
Sbjct: 234 HVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNT-VAVWDVPTG-TRIKKLKGHANFVNSVSGARRGPELLVSASDDN 253
++P H+ A D + + VWD+ +++L GH ++ +V L++SA D+
Sbjct: 216 YNPKREHILVTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDS 275
Query: 254 TIKLWDA 274
+ LW A
Sbjct: 276 VVNLWYA 282
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 42.3 bits (95), Expect = 2e-04
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Frame = +2
Query: 146 PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS--SYPV 319
P G + L+ H + VN ++ + VSASDD+T+K+WD+RK SF S +Y +
Sbjct: 1069 PRGVLVAHLQEHRSAVNDIATSS-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL 1127
Query: 320 -------TSVLFNDTAEKILSSGVDNVIKMWDI 397
T++L N T +++ D VI M+ I
Sbjct: 1128 EGSRGMCTTMLRNST--QVVVGASDGVIHMFSI 1158
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 142
++ H A+ + S D S + + D+TV VWD
Sbjct: 1077 LQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/127 (21%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS-- 205
+++ + GH G+I ++ +S DGS + + + D + +W++ + +++ G F +SV
Sbjct: 227 HMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDS----QEVVGPVLFGHSVRVW 282
Query: 206 GARRGPELLVSASDDNTIKLWDA-RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVI 382
L+V+A +D T ++W + V + L++ + ++++G D+ I
Sbjct: 283 DCCISDSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAI 342
Query: 383 KMWDIRN 403
K+ + N
Sbjct: 343 KVHQLHN 349
Score = 28.7 bits (61), Expect = 2.5
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 17/124 (13%)
Frame = +2
Query: 194 NSVSGARRGPELLVSASDDNTIKLWDARKRN---PVASFDSSYPVTSVLFNDTAE--KIL 358
+S +LL DN++ +WD ++ + S + T L+ D+ +I
Sbjct: 138 DSTGSLEEEDKLLAIGCSDNSLSIWDVKESRMAFEIQSPERCLLYTMRLWGDSISTLRIA 197
Query: 359 SSGVDNVIKMW--------DIRNNQIS----LKIKGHTDTVTGLSLSWDGAYLLSNSMDN 502
S + N I +W ++ + S L++ GH ++ + S DG+ ++S S D
Sbjct: 198 SGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDR 257
Query: 503 TLRI 514
+ RI
Sbjct: 258 SARI 261
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/127 (21%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS-- 205
+++ + GH G+I ++ +S DGS + + + D + +W++ + +++ G F +SV
Sbjct: 227 HMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDS----QEVVGPVLFGHSVRVW 282
Query: 206 GARRGPELLVSASDDNTIKLWDA-RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVI 382
L+V+A +D T ++W + V + L++ + ++++G D+ I
Sbjct: 283 DCCISDSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAI 342
Query: 383 KMWDIRN 403
K+ + N
Sbjct: 343 KVHQLHN 349
Score = 28.7 bits (61), Expect = 2.5
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 17/124 (13%)
Frame = +2
Query: 194 NSVSGARRGPELLVSASDDNTIKLWDARKRN---PVASFDSSYPVTSVLFNDTAE--KIL 358
+S +LL DN++ +WD ++ + S + T L+ D+ +I
Sbjct: 138 DSTGSLEEEDKLLAIGCSDNSLSIWDVKESRMAFEIQSPERCLLYTMRLWGDSISTLRIA 197
Query: 359 SSGVDNVIKMW--------DIRNNQIS----LKIKGHTDTVTGLSLSWDGAYLLSNSMDN 502
S + N I +W ++ + S L++ GH ++ + S DG+ ++S S D
Sbjct: 198 SGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDR 257
Query: 503 TLRI 514
+ RI
Sbjct: 258 SARI 261
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 42.3 bits (95), Expect = 2e-04
Identities = 42/175 (24%), Positives = 73/175 (41%), Gaps = 22/175 (12%)
Frame = +2
Query: 53 HTGAIMQLCFS-PDGSHLYTGATDNTVAVWDVPTGTR------IKKLK-----------G 178
H G++ L +G +L +GA D + AV+DV T I K K G
Sbjct: 42 HRGSVNSLQVDLTEGRYLLSGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENG 101
Query: 179 HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTA--EK 352
H ++S L ++ S D+ +K+WD V F V + A
Sbjct: 102 HKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHT 161
Query: 353 ILSSGVDNV-IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLL-SNSMDNTLR 511
++++G ++V +++ DI + S + GH D V + S ++L + D +R
Sbjct: 162 LIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIR 216
Score = 39.5 bits (88), Expect = 0.001
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHAN-FVNSVSGARRGP 223
GH AI + P + L+ TG+ D+ + VWD T + K + ++S
Sbjct: 101 GHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSH 160
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKIL-SSGVDNVIKMWDI 397
L+ + ++D ++L D + V SV ++ ++E +L + G D I+ WDI
Sbjct: 161 TLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
Query: 398 R 400
R
Sbjct: 221 R 221
Score = 37.5 bits (83), Expect = 0.005
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARRGPE 226
H GA+ L + DG +L + +D+ + +WD+ +G T + G +
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDTSDDP 370
Query: 227 LLVSASDDNTIK---LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
LV T+K +W R + S V + FN +++ +SG D I +W
Sbjct: 371 ALVFVPCMKTVKAFGMWSGRTTLMLRGHYES--VNTCCFNSNDQELYTSGSDRQILVW 426
Score = 34.7 bits (76), Expect = 0.037
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 157
++++GH ++ CF+ + LYT +D + VW P GT
Sbjct: 393 LMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWS-PGGT 431
Score = 33.9 bits (74), Expect = 0.065
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +2
Query: 110 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP 289
G D V + D+ +G L GH + V SV + +L + D I+ WD R+
Sbjct: 166 GTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGC 225
Query: 290 VASFDSS 310
D S
Sbjct: 226 FRVLDQS 232
Score = 29.5 bits (63), Expect = 1.4
Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 9/166 (5%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVN-------- 196
+ GH +M + +S LYTG D + WD+ + L +
Sbjct: 186 LSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDQSQTQLGFRPPILKR 245
Query: 197 SVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDN 376
+ G++ S N +K +++ + SS SV + +K + G+ +
Sbjct: 246 TAVGSKLSSVAKSSLGGQNRLKTLQSKQTGSQSVKGSSSAKASV--EKSRQKRIHPGMLS 303
Query: 377 VIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ + H VTGL + DG YLLS D+ +R+
Sbjct: 304 TLD-----------RATAHYGAVTGLKATNDGMYLLSAGSDSRIRL 338
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 166
KGHTGA+ + G + +G+TD +V +W+V TG +K
Sbjct: 420 KGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK 459
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 41.1 bits (92), Expect = 4e-04
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Frame = +2
Query: 50 GHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN-FVNSVSGARRGP 223
GH AI + P D TG+ D+ V VWD T + K + ++S
Sbjct: 101 GHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSH 160
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKIL-SSGVDNVIKMWDI 397
L+ + +DD ++L D + V SV ++ ++E +L + G D I+ WDI
Sbjct: 161 TLIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
Query: 398 R 400
R
Sbjct: 221 R 221
Score = 34.3 bits (75), Expect = 0.049
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 110 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP 289
G D V + D+ +G L GH + V SV + +L + D I+ WD R+
Sbjct: 166 GTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGC 225
Query: 290 VASFDSS 310
D+S
Sbjct: 226 FRVLDNS 232
Score = 33.1 bits (72), Expect = 0.11
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARRGPE 226
H G + L + DG +L + + + + +WD+ +G T + G ++
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQTDRAIQLDTSDDP 370
Query: 227 LLVSASDDNTIK---LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
LV T+K +W R + S V + FN +++ +SG D I +W
Sbjct: 371 ALVFVPCMKTVKGFGMWSGRTTLMLRGHYES--VNTCCFNSNDQELYTSGADRQIIVW 426
Score = 32.7 bits (71), Expect = 0.15
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 157
++++GH ++ CF+ + LYT D + VW P G+
Sbjct: 393 LMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS-PGGS 431
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 40.3 bits (90), Expect = 8e-04
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H G + + S S +Y+G D V D +G I+K K V+S+ + G ++L
Sbjct: 115 HPGGVNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDG-KIL 173
Query: 233 VSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAEKILSSGV-DNVIKMW 391
V+AS +K ++ + F + +P V V F + + +LSS V + I +W
Sbjct: 174 VTAS--TQLKTFNCSDLKKIQKF-TGHPGVVRCVAFTEDGKYVLSSAVGERYIAVW 226
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 226
K T + LC SPDG L T +T + ++ +I+K GH V V+ G
Sbjct: 155 KASTKTVSSLCVSPDGKILVTASTQ--LKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKY 212
Query: 227 LLVSASDDNTIKLW 268
+L SA + I +W
Sbjct: 213 VLSSAVGERYIAVW 226
Score = 34.3 bits (75), Expect = 0.049
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Frame = +2
Query: 95 SHLYTGATDNTVAVWDVPTGTRIKKLKG-HANFVNSVSGARRGPELLVSASDDNTIKLWD 271
S L G V DV +G ++ H VN+VS + + + S D + D
Sbjct: 86 SVLVLGTGGGDVLALDVASGQLKWRISDCHPGGVNAVSSSAKA-SCIYSGGADGMVCQID 144
Query: 272 ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTG 451
N + F +S S L KIL + +K ++ + + K GH V
Sbjct: 145 PHSGNLIRKFKASTKTVSSLCVSPDGKILVTA-STQLKTFNCSDLKKIQKFTGHPGVVRC 203
Query: 452 LSLSWDGAYLLSNSM 496
++ + DG Y+LS+++
Sbjct: 204 VAFTEDGKYVLSSAV 218
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVW 139
+ + GH G + + F+ DG ++ + A + +AVW
Sbjct: 189 KKIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERYIAVW 226
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 40.3 bits (90), Expect = 8e-04
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +2
Query: 2 LIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIKKLK 175
++W+ + + M HT I L +SP+ + TG+ D V V++V P +RI
Sbjct: 381 VVWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARN 440
Query: 176 GHANFVNSVSGARRGPELLVSASDDNTIKLW 268
H VN+V A + S+ +D +++LW
Sbjct: 441 AHLGGVNAV--AFIDDCTVASSGEDASVRLW 469
Score = 38.3 bits (85), Expect = 0.003
Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARR 217
V++ H GA+ + +SPD + +G + VWD T ++ + H +NS++ +
Sbjct: 351 VLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPN 410
Query: 218 GPELLVSASDDNTIKLWDARK--RNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKM 388
+++ + S D + +++ K + + + ++ V +V F D + SSG D +++
Sbjct: 411 N-KMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAFIDDC-TVASSGEDASVRL 468
Query: 389 WDI 397
W I
Sbjct: 469 WHI 471
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL---KGHANFVNSVSGARRGP 223
H+ + + +SPDG+ T ++D ++D TG ++ +L GH + +VS +
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 224 ELLVSASDDNTIKLWDARKRNPVAS 298
+L + S D + K+W+ + + S
Sbjct: 110 RVL-TVSADKSAKVWEVAEDGTIGS 133
Score = 36.7 bits (81), Expect = 0.009
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 9/123 (7%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNS------VSGA 211
GH G+I + +SPD + T + D + VW+V I + +F+ S + G
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGC 153
Query: 212 RRGPELLVSASDDNTIKLW--DARKRNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVI 382
+ L++ S T+ L+ D + P+ VTS+ + + + ILS D +I
Sbjct: 154 LWQNDHLITVSLGGTMSLFSADDMDKPPLLLSGHIKNVTSLAVLGENQKTILSCSYDGLI 213
Query: 383 KMW 391
W
Sbjct: 214 VKW 216
Score = 36.3 bits (80), Expect = 0.012
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGS-HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 226
GH+ ++ F P + T D V +D P + H+NFVN + + G +
Sbjct: 6 GHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTK 65
Query: 227 LLVSASDDNTIKLWDAR---KRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
+ +SD + ++D + K +AS D + +V ++ ++++L+ D K+W+
Sbjct: 66 FITVSSDKKGM-IYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVWE 124
Query: 395 I 397
+
Sbjct: 125 V 125
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 40.3 bits (90), Expect = 8e-04
Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Frame = +2
Query: 83 SPDGS-HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
+P GS + T D TV ++D + + H + VN++S + G +L+ D
Sbjct: 244 APSGSLRVMTANNDCTVRLFDATNFALLNRFAFHWS-VNNISTSPDG-KLVAVLGDSPEC 301
Query: 260 KLWDARKRNPVASFDSSYPVT-SVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKI-KGH 433
L D + + + S ++ + + + D ++WD+RN SLK+ KG+
Sbjct: 302 LLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGN 361
Query: 434 TDTVTGLSLSWDGAYL 481
+ L + DG +L
Sbjct: 362 MGAIRALRFTSDGRFL 377
Score = 33.5 bits (73), Expect = 0.086
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARRG 220
++GH + P+G L TG D T +WDV +K LKG+ + ++ G
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 221 PELLVSASDDNTIKLWD 271
L A + + L+D
Sbjct: 375 -RFLAMAEPADFVHLFD 390
Score = 33.5 bits (73), Expect = 0.086
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 154
+W+V +++ V+KG+ GAI L F+ DG L + V ++D G
Sbjct: 345 LWDVRNLSQSLKVLKGNMGAIRALRFTSDGRFLAMAEPADFVHLFDTEAG 394
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 40.3 bits (90), Expect = 8e-04
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
++P + +++++ WD+ T + ++ V +V + +LVSA D++ I
Sbjct: 176 WNPHDVNSVAATSESSIQFWDLRTMKKNNSIE--RAHVRNVDYNLKREHILVSADDESGI 233
Query: 260 KLWDARK-RNPVASFDS-SYPVTSVLFN-DTAEKILSSGVDNVIKMW 391
LWD RK + PV ++ +V N + E ILS G D+ + +W
Sbjct: 234 HLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
Score = 33.1 bits (72), Expect = 0.11
Identities = 20/91 (21%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +2
Query: 8 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNT-VAVWDV-PTGTRIKKLKGH 181
W++ +N + + H + + ++ H+ A D + + +WD+ T +++L GH
Sbjct: 195 WDLRTMKKNNSIERAH---VRNVDYNLKREHILVSADDESGIHLWDLRKTKFPVQELPGH 251
Query: 182 ANFVNSVSGARRGPELLVSASDDNTIKLWDA 274
++ +V EL++S D+ + LW A
Sbjct: 252 THWTWAVRCNPEYEELILSVGTDSAVNLWFA 282
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 39.9 bits (89), Expect = 0.001
Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Frame = +2
Query: 23 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNS 199
+ E V+ G + L F+ DG+ L TGA D T+ V++ P+ T + + K HA+ V S
Sbjct: 131 ESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHAS-VKS 189
Query: 200 VSGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVLFNDTAEKILSSG 367
++ + G + LVS ++WD +AS D + +++ ++L
Sbjct: 190 LTFSESG-KFLVSLGAP-LCRVWDVNASAAIASLSKEKDEMFASCRFSVDNSGSEVLYVA 247
Query: 368 VD----NVIKMWDIRN-NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ I WD + + S K+ ++++ ++S DG L +++ + I
Sbjct: 248 ANTQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAVGTLEGDVLI 301
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 39.9 bits (89), Expect = 0.001
Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Frame = +2
Query: 23 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNS 199
+ E V+ G + L F+ DG+ L TGA D T+ V++ P+ T + + K HA+ V S
Sbjct: 131 ESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHAS-VKS 189
Query: 200 VSGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVLFNDTAEKILSSG 367
++ + G + LVS ++WD +AS D + +++ ++L
Sbjct: 190 LTFSESG-KFLVSLGAP-LCRVWDVNASAAIASLSKEKDEMFASCRFSVDNSGSEVLYVA 247
Query: 368 VD----NVIKMWDIRN-NQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+ I WD + + S K+ ++++ ++S DG L +++ + I
Sbjct: 248 ANTQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAVGTLEGDVLI 301
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +2
Query: 167 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD----ARKRN-PVASFDSSYPVTSVL 331
KL GH VN+V G ++LVS SDD I LW+ +RK + P ++ + +
Sbjct: 50 KLNGHEGCVNAVEFNSTG-DVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIP 108
Query: 332 FNDTAEKILSSGVDNVIKMWDIRNN 406
F D I++SG D +++ I N
Sbjct: 109 FTDD-RTIITSGADGQVRLGQILEN 132
Score = 31.9 bits (69), Expect = 0.26
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
F P+ ++ +G+ + +W G ++ + G VN + P LL S + ++
Sbjct: 329 FGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHIP-LLASCGIEKSV 387
Query: 260 KLW 268
KLW
Sbjct: 388 KLW 390
Score = 30.3 bits (65), Expect = 0.80
Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 7/132 (5%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHA-NFVNSVSGARR 217
+ GH G + + F+ G L +G+ D + +W+ +G+R + GH N +
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 218 GPELLVSASDDNTIKLWDARKRNPVAS-----FDSSYPVTSVLFNDTAEKILSSGVDNVI 382
++++ D ++L + V + +VL D S G D +
Sbjct: 111 DDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGD-PNVFYSCGEDGFV 169
Query: 383 KMWDIRNNQISL 418
+ +DIR+N ++
Sbjct: 170 QHFDIRSNSATM 181
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 39.9 bits (89), Expect = 0.001
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +2
Query: 38 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 217
M+ G FS D L T NTV+V+ V TG +I L+ H V SV
Sbjct: 1 MIRGGRNNITSAPAFSKDAKKLLL-CTANTVSVYSVATGLKITSLEDHTAPVTSVIVDPS 59
Query: 218 GPELLV---SASDDNTIKLWDARKRNPVASFDSSYPVTSVL 331
E + ++S D I++W+ + FD+ P+ S++
Sbjct: 60 SDETVSYCWTSSLDGKIRIWEFSAPKLLKIFDTHLPIHSLV 100
Score = 32.7 bits (71), Expect = 0.15
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR 160
E+ H+ + L FS DG+ LY+G VW++ TG +
Sbjct: 237 ESCTTFNWHSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGKK 280
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W++ ++V V+KG+ GAI + ++ DG ++ + V V+DV G ++
Sbjct: 345 VWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQ---EI 401
Query: 185 NFVNSVSGARRGPE 226
+F +SG P+
Sbjct: 402 DFFGEISGISFSPD 415
Score = 32.7 bits (71), Expect = 0.15
Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 2/143 (1%)
Frame = +2
Query: 83 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 262
SPDG L + + D TG ++ L GH +F + S + + D T +
Sbjct: 286 SPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDF-SFASAWHPDGVTFSTGNQDKTCR 344
Query: 263 LWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHT 436
+WD R + + + + S+ + + + + + + ++D+ N + +
Sbjct: 345 VWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFF 404
Query: 437 DTVTGLSLSWDGAYLLSNSMDNT 505
++G+S S D L D T
Sbjct: 405 GEISGISFSPDTEALFIGVWDRT 427
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARRG 220
+ GH + PDG TG D T VWD+ + LKG+ + S+ G
Sbjct: 315 LSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDG 374
Query: 221 PELLVSASDD 250
+ ++ D
Sbjct: 375 KYMAMAEPAD 384
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 39.5 bits (88), Expect = 0.001
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 12/132 (9%)
Frame = +2
Query: 110 GATDNTVAVWDVPTG-----TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 274
G D + +W+ + ++ L H V + + P L S +DD T+ +WD
Sbjct: 86 GLVDGNIGLWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDL 145
Query: 275 RKRNPVASF---DSSY---PVTSVLFNDTAEKILSSGVDN-VIKMWDIRNNQISLKIKGH 433
+ + + SY ++S+ +N + +L+S N +WD+ N +I +K
Sbjct: 146 ANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIWDVNNEKIITDLK-- 203
Query: 434 TDTVTGLSLSWD 469
TV L WD
Sbjct: 204 -TTVRCSVLQWD 214
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGH-ANFVNSVSGARR 217
++GH G + L ++ +GS L +G+ D + +W+ + + + GH AN +
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 218 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVD 373
EL+VS + D ++L++ + + A D++ + S L+ ++ V+
Sbjct: 106 SDELVVSGAGDAEVRLFNTSRLSGRAEDDNAI-IPSALYQCHTRRVKKLAVE 156
Score = 29.9 bits (64), Expect = 1.1
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
Frame = +2
Query: 164 KKLKGHANFVNSVSGA----RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 331
++ GH N + A +RG E + S SDD +W+ + + V + +
Sbjct: 611 RRYVGHCNVGTDIKQASFLGQRG-EYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCI 669
Query: 332 FNDTAEKILS-SGVDNVIKMWDIRNNQISLKIKGHTDTVTG--LSLSWDGAYLLSNSMDN 502
+ +++ SG+DN IK+W + S+ G T + + LS + +N
Sbjct: 670 QCHPFDSVVATSGIDNTIKIWSPTASVPSIVAGGSAGPATANVVEVMESNQQKLSRNREN 729
Query: 503 TLRI 514
L +
Sbjct: 730 PLSV 733
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2
Query: 164 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY 313
KKL+ H VN+VS G ++L+S SDD + LWD + N SF S +
Sbjct: 53 KKLEKHKGCVNTVSFNAEG-DVLISGSDDRRVVLWDWQLGNVKLSFHSGH 101
Score = 36.3 bits (80), Expect = 0.012
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
++ H G + + F+ +G L +G+ D V +WD G KL H+ N+V A+ P
Sbjct: 55 LEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGN--VKLSFHSGHANNVFQAKFMP 112
Query: 224 ELLVSASDDNTI 259
SDD TI
Sbjct: 113 -----FSDDRTI 119
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/66 (21%), Positives = 32/66 (48%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
F P ++ +G+ + +W G I+ ++ + VN + P +L S+ ++ I
Sbjct: 342 FGPRSEYVVSGSDCGRIFIWRKKGGELIRVMEADRHVVNCIEPHPHIP-VLASSGIESDI 400
Query: 260 KLWDAR 277
K+W ++
Sbjct: 401 KVWTSK 406
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 39.1 bits (87), Expect = 0.002
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 3/158 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
IW+V Q + +G G I L +SP G + + D T +W+ T T + +
Sbjct: 239 IWDV-SQGAGTPIRRG-LGGISMLKWSPTGDYFFAARFDGTFCLWE--TNTWTSEPWSLS 294
Query: 185 NFVNSVSGARRGPE---LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKI 355
+ SV+GA PE +L+S S +T+ + P S D+ + V + A
Sbjct: 295 SGSGSVTGAIWDPEGRFILISFSKSSTLGSVHFSSKPP--SLDAH--LLPVELPEIASLT 350
Query: 356 LSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWD 469
G++ + WD ++++ KG + GL +D
Sbjct: 351 GCEGIEKI--AWDASGERLAVSYKGGDENYKGLIAIYD 386
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 39.1 bits (87), Expect = 0.002
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Frame = +2
Query: 59 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 238
GAI + FS DG++L T D + ++D T + +K + + + + G LL
Sbjct: 304 GAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTG 363
Query: 239 ASDDNTIKLWDARKRNPVA------------SFDS--SYPVTSVLFNDTAEKILSSGVDN 376
DD +++W R VA +FDS S P + + + S G D
Sbjct: 364 GEDD-LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSEGSGENVMYRFGSVGQDT 422
Query: 377 VIKMWDIRNNQISLKIK 427
+ +WD+ ++I + ++
Sbjct: 423 QLLLWDLEMDEIVVPLR 439
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 205
+K + GA++ +S DG +L TG D+ V VW + + +GH ++V+ V+
Sbjct: 341 VKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 394
Score = 32.3 bits (70), Expect = 0.20
Identities = 17/90 (18%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 191 VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSG 367
+NS++ + G L + D ++++D + V S Y + ++ + +L+ G
Sbjct: 306 INSIAFSNDGA-YLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGG 364
Query: 368 VDNVIKMWDIRNNQISLKIKGHTDTVTGLS 457
D+++++W + + ++ +GH V+G++
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 394
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 13/93 (13%)
Frame = +2
Query: 86 PDGSHLYTGATDNTVAVWD--VPTGT-----------RIKKLKGHANFVNSVSGARRGPE 226
P GS Y+ T + A WD VP GT ++ + H +SG E
Sbjct: 442 PGGSPTYS--TGSQSAHWDNIVPMGTLQPAPCMRDVPKLSPVVAHRVHTEPLSGLIFTQE 499
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTS 325
L++A + +K+W P +S +++ P TS
Sbjct: 500 SLITACREGHLKIWTRPDTQPSSSSEATNPTTS 532
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +2
Query: 11 NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHAN 187
N G+ E V+ G + L F+P+GS L GA D T+ V+ P+ T + + + H++
Sbjct: 138 NQAGESEEVIKELRDVGQQLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSS 197
Query: 188 FVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 298
V ++ + G + LVS ++WD VAS
Sbjct: 198 -VKCLTFSESG-QFLVSLGGP-VCRVWDVNASAAVAS 231
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Frame = +2
Query: 74 LCFSP-DGSHLYTGATDNTVAVWDVPTG--------TRIKKLKGHANFV-NSVSGARRGP 223
LC +P + L+TG D + WD +G ++KG N G+ P
Sbjct: 217 LCATPGESGTLFTGGEDRAITAWDTNSGKLAYSIEDAHPARIKGIVVLTRNDSDGSLEDP 276
Query: 224 ELLVSASDDNTIKLWDAR 277
L+ SAS D I++WD R
Sbjct: 277 YLIGSASSDGIIRVWDVR 294
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/61 (24%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Frame = +2
Query: 107 TGATDNTVAVWDVPTGTRIKKL--KGHANFVNSVS----GARRGPELLVSASDDNTIKLW 268
+G +D+T+ ++D+P+ + + L HA + ++S + P L+SA+ D ++ ++
Sbjct: 56 SGGSDDTIHLYDLPSASSLGSLLDHNHAASITALSFYTPSSLSFPRNLISAAADGSVAIF 115
Query: 269 D 271
D
Sbjct: 116 D 116
Score = 27.1 bits (57), Expect = 7.5
Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 12/129 (9%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE- 226
GH ++++ F P G Y N V V + +L+ + + A G
Sbjct: 171 GHEASLVK--FDPSGERFYM-VVSNKVGVHQSEDAKLLLELENPSR--KRILCATPGESG 225
Query: 227 LLVSASDDNTIKLWDARKRNPVASFDSSYP-----VTSVLFNDTAEK------ILSSGVD 373
L + +D I WD S + ++P + + ND+ I S+ D
Sbjct: 226 TLFTGGEDRAITAWDTNSGKLAYSIEDAHPARIKGIVVLTRNDSDGSLEDPYLIGSASSD 285
Query: 374 NVIKMWDIR 400
+I++WD+R
Sbjct: 286 GIIRVWDVR 294
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 38.3 bits (85), Expect = 0.003
Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Frame = +2
Query: 32 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 211
++ + GHT A+ + ++T D+ V +WD+ G I K + +++
Sbjct: 154 SIDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAA- 212
Query: 212 RRGPELLVSASDDNTIKLWDA--------------RKRNPVASFDSSYPVTSVLFNDTAE 349
+LLV+ D I W + +++ + P+TS+ + T+
Sbjct: 213 --DTKLLVAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLALDMTS- 269
Query: 350 KILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLS 457
I S D +++WD R++ +K H+D V GL+
Sbjct: 270 -IFSGSWDMSVRIWD-RSSMKCVKTLRHSDWVWGLA 303
Score = 33.5 bits (73), Expect = 0.086
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV---PTGTRIKKLK 175
IW+V + ++ H G L S G L+TG D + ++++ + T + +
Sbjct: 319 IWDVSSETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIRRYGSETSVVLIS 378
Query: 176 GHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 280
+ V LVSAS D + L D RK
Sbjct: 379 QWMPHTSPVYSLSFEFPWLVSASGDGKLALIDVRK 413
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2
Query: 164 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY 313
KKL H VN+VS G ++L+S SDD + LWD + + SFDS +
Sbjct: 49 KKLDKHKGCVNTVSFNADG-DILLSGSDDRQVILWDWQTASVKLSFDSGH 97
Score = 33.1 bits (72), Expect = 0.11
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H G + + F+ DG L +G+ D V +WD T + KL + N++ A+ P
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTAS--VKLSFDSGHFNNIFQAKFMP--- 108
Query: 233 VSASDDNTI 259
SDD TI
Sbjct: 109 --FSDDRTI 115
Score = 30.3 bits (65), Expect = 0.80
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
F P ++ +G+ + +W G ++ ++ + VN + P L+ S+ D I
Sbjct: 318 FGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMP-LMCSSGIDTDI 376
Query: 260 KLW 268
K+W
Sbjct: 377 KIW 379
Score = 27.5 bits (58), Expect = 5.7
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIL-SSGVDNVIKMWDIR 400
E +VS SD I +W + + + ++ V + + + ++ SSG+D IK+W
Sbjct: 323 EYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMPLMCSSGIDTDIKIWTPG 382
Query: 401 NNQISLKIKGHTDTVTGL-SLSWDGAYLLSNSMDN 502
+ L G+ +G + W Y + + D+
Sbjct: 383 GTEKPLS-PGNAKQASGFGNPRWFDGYYVDDDDDS 416
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +2
Query: 317 VTSVLFNDTAEKILSSGV-DNVIKMWDIRNNQISL--KIKGHTDTVTGLSLSWDGAYLLS 487
VT+++++ + +L SG D I++W++ +L IK H TVT SLS G +LS
Sbjct: 856 VTALIYH---KGLLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLS 912
Query: 488 NSMDNTLRI 514
S D T+R+
Sbjct: 913 GSADKTIRV 921
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W++ ++V V++G+ GAI + ++ DG ++ + V V+DV G ++
Sbjct: 343 VWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQ---EI 399
Query: 185 NFVNSVSGARRGPE---LLVSASDDNTIKLWDARKRNPVASFDS 307
+F +SG P+ L + D L + +R+ + DS
Sbjct: 400 DFFGEISGISFSPDTEALFIGVWDRTYGSLIEYSRRHNYSYLDS 443
Score = 32.7 bits (71), Expect = 0.15
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 3/144 (2%)
Frame = +2
Query: 83 SPDGSHLYTGATDNTVAVW-DVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
SPDG L T DN ++ D TG + L GH +F + S + + D T
Sbjct: 284 SPDGK-LLTIVGDNPESLLVDPNTGKTLATLSGHLDF-SFASAWHPDGFTFSTGNQDKTC 341
Query: 260 KLWDARK-RNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGH 433
++WD R VA + + S+ + + + + + + ++D+ N + +
Sbjct: 342 RVWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDF 401
Query: 434 TDTVTGLSLSWDGAYLLSNSMDNT 505
++G+S S D L D T
Sbjct: 402 FGEISGISFSPDTEALFIGVWDRT 425
Score = 31.9 bits (69), Expect = 0.26
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVS 205
+ + + GH + PDG TG D T VWD+ ++ + L+G+ + S+
Sbjct: 308 KTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIR 367
Query: 206 GARRGPELLVSASDD 250
G + ++ D
Sbjct: 368 YTSDGKYMAMAEPAD 382
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 38.3 bits (85), Expect = 0.003
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 3/135 (2%)
Frame = +2
Query: 86 PDGS-HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 262
P GS L T D + V+D + TR+ + + VN+ S + G +LL D
Sbjct: 216 PSGSLRLITANNDCKIRVFDAQSFTRVSEFALDWS-VNNTSVSPDG-KLLAVVGDSTECL 273
Query: 263 LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQISLKI-KGHT 436
+ D+ ++S + IL++G D ++WDIRN S + KG+
Sbjct: 274 ISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNM 333
Query: 437 DTVTGLSLSWDGAYL 481
+ GL + +G +L
Sbjct: 334 GAIRGLKFTPEGRFL 348
Score = 36.7 bits (81), Expect = 0.009
Identities = 25/103 (24%), Positives = 45/103 (43%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W++ E+ V+KG+ GAI L F+P+G L + V ++D +G +
Sbjct: 316 LWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQSQEIDLF 375
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY 313
+ +S + L V +D L + ++R DS Y
Sbjct: 376 GEIAGISFSPDTEALYVGVADRTYGSLLEYKRRKDNHYMDSFY 418
Score = 34.7 bits (76), Expect = 0.037
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +2
Query: 83 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 262
SPDG L + D +G I L+GH ++ + S +L + + D +
Sbjct: 257 SPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDY-SFASAWHPNGLILATGNQDTACR 315
Query: 263 LWDARKRNPVASF 301
LWD RNP SF
Sbjct: 316 LWDI--RNPSESF 326
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVSGARRG 220
++GH + P+G L TG D +WD+ + LKG+ + + G
Sbjct: 286 LRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEG 345
Query: 221 PELLVSASDDNTIKLWDAR 277
L A + + ++D +
Sbjct: 346 -RFLAMAEPADFVHIFDTQ 363
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
IW+ E+V V+KG+ GA+ + F+ DG ++ + V ++D +G K +
Sbjct: 345 IWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSG---YKKEQEI 401
Query: 185 NFVNSVSGARRGPE 226
+F +SG P+
Sbjct: 402 DFFGEISGISFSPD 415
Score = 37.1 bits (82), Expect = 0.007
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 2/143 (1%)
Frame = +2
Query: 83 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 262
SPDG + D + D G I LKGH ++ + S + + D T +
Sbjct: 286 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDY-SFASAWHPNGVTFATGNQDKTCR 344
Query: 263 LWDARK-RNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHT 436
+WD RK VA + V S+ F + + + + ++D ++ +
Sbjct: 345 IWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFF 404
Query: 437 DTVTGLSLSWDGAYLLSNSMDNT 505
++G+S S D L D T
Sbjct: 405 GEISGISFSPDTESLFIGVWDRT 427
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTGTRIKKLKGHANFVNSVS 205
+ + +KGH + P+G TG D T +WD + LKG+ V S+
Sbjct: 310 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 369
Query: 206 GARRGPELLVSASDDNTIKLWDAR 277
G + A + + ++D +
Sbjct: 370 FTSDG-RYVAMAEPADFVHIYDTK 392
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/94 (21%), Positives = 39/94 (41%)
Frame = +2
Query: 233 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQI 412
+++++D ++ +D + V F +PV + + + G D + D N Q
Sbjct: 252 MASNNDCGVRDFDMERYKLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQT 311
Query: 413 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+KGH D + +G + + D T RI
Sbjct: 312 IGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 345
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
IW+ E+V V+KG+ GA+ + F+ DG ++ + V ++D +G K +
Sbjct: 339 IWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSG---YKKEQEI 395
Query: 185 NFVNSVSGARRGPE 226
+F +SG P+
Sbjct: 396 DFFGEISGISFSPD 409
Score = 37.1 bits (82), Expect = 0.007
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 2/143 (1%)
Frame = +2
Query: 83 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 262
SPDG + D + D G I LKGH ++ + S + + D T +
Sbjct: 280 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDY-SFASAWHPNGVTFATGNQDKTCR 338
Query: 263 LWDARK-RNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHT 436
+WD RK VA + V S+ F + + + + ++D ++ +
Sbjct: 339 IWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFF 398
Query: 437 DTVTGLSLSWDGAYLLSNSMDNT 505
++G+S S D L D T
Sbjct: 399 GEISGISFSPDTESLFIGVWDRT 421
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTGTRIKKLKGHANFVNSVS 205
+ + +KGH + P+G TG D T +WD + LKG+ V S+
Sbjct: 304 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 363
Query: 206 GARRGPELLVSASDDNTIKLWDAR 277
G + A + + ++D +
Sbjct: 364 FTSDG-RYVAMAEPADFVHIYDTK 386
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/94 (21%), Positives = 39/94 (41%)
Frame = +2
Query: 233 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQI 412
+++++D ++ +D + V F +PV + + + G D + D N Q
Sbjct: 246 MASNNDCGVRDFDMERYKLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQT 305
Query: 413 SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+KGH D + +G + + D T RI
Sbjct: 306 IGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 339
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 37.9 bits (84), Expect = 0.004
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK---GHANFVNSVSGARRGP 223
H+ + + F+PDGS T ++D ++D T + +L GH + +VS + G
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGK 245
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFD-------SSYPVTSVLF-----NDTAEKILSSG 367
++L + S D + K+WD N S + SS V +L ND + G
Sbjct: 246 QVL-TVSADKSAKIWDI-SDNGSGSLNTTLNCPGSSGGVDDMLVGCLWQNDHIVTVSLGG 303
Query: 368 VDNVIKMWDIRNNQISLKIKGHTDTVTGLS-LSWDGAYLLSNSMDNTL 508
++ D+ ++ + GH V+ L+ L + Y+LS S D +
Sbjct: 304 TISIFSASDL--DKSPFQFSGHMKNVSSLAVLKGNADYILSGSYDGLI 349
Score = 37.1 bits (82), Expect = 0.007
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP---TGTRIKKLK--GHANFVNS-VSGA 211
GH G+I + +SPDG + T + D + +WD+ +G+ L G + V+ + G
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGC 289
Query: 212 RRGPELLVSASDDNTIKLWDAR--KRNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVI 382
+ +V+ S TI ++ A ++P V+S+ + A+ ILS D +I
Sbjct: 290 LWQNDHIVTVSLGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNADYILSGSYDGLI 349
Query: 383 KMW 391
W
Sbjct: 350 CKW 352
Score = 33.9 bits (74), Expect = 0.065
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD-VPTGTRIKKLKGHANFVNSVSGARR 217
V++ H GAI + +SPD S + + VWD V ++K + H+ +N ++ +
Sbjct: 486 VLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPN 545
Query: 218 GPELLVSASDDNTIKLWDARK-RNPVASFDSSY--PVTSVLFNDTAEKILSSGVDNVIKM 388
++ + S D + +++ K + + ++ V + F D + ++SSG D I++
Sbjct: 546 S-TMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFADDSH-VVSSGEDACIRV 603
Query: 389 W 391
W
Sbjct: 604 W 604
Score = 33.5 bits (73), Expect = 0.086
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +2
Query: 2 LIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIKKLK 175
++W+ + + M H+ I L +SP+ + + TG+ D V V++V P +R+
Sbjct: 516 VVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTIKG 575
Query: 176 GHANFVNSVSGARRGPELLVSASDDNTIKLW 268
H V + A +VS+ +D I++W
Sbjct: 576 AHLGGVYGLGFA--DDSHVVSSGEDACIRVW 604
Score = 31.5 bits (68), Expect = 0.35
Identities = 31/147 (21%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIK-KLKGHANFVNSVSGARRGPELLVS--ASDD 250
+SP+G + +G TV +W +K + K A ++ + + G ++ S
Sbjct: 64 YSPNGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAGRIDDLQWSADGMRIVASGDGKGK 123
Query: 251 NTIK--LWDARKRNPVASFDS-SYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRNNQISL 418
+ ++ +WD+ V FD S V S T +I++ G D ++ ++ + L
Sbjct: 124 SLVRAFMWDSGSN--VGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKFKL 181
Query: 419 KIKGHTDTVTGLSLSWDGAYLLSNSMD 499
+ H++ V + + DG+ ++ S D
Sbjct: 182 SSREHSNFVNCVRFAPDGSKFITVSSD 208
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 302 DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQI-SLKIKGHTDTVTGLSLSWDGAY 478
+ +YP T ++ E I S V +++W N+ + + K + L S DG
Sbjct: 54 EHAYPATVARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAGRIDDLQWSADGMR 113
Query: 479 LLSN 490
++++
Sbjct: 114 IVAS 117
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 80 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNS---VSGARRGPELLV---SA 241
FS D L T NTV+V+ TG +I L+GH V + V + ++L +A
Sbjct: 15 FSNDAKKLLV-CTGNTVSVFSAATGLQITSLEGHTAPVTTLIVVPASSPAQKILCYCWTA 73
Query: 242 SDDNTIKLWDARKRNPVASFDSSYPVTSVL 331
S D TI+ WD + + D+ P+ S++
Sbjct: 74 SLDGTIRHWDFSGPELLKTIDAQLPIYSMV 103
Score = 35.9 bits (79), Expect = 0.016
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR 160
H+ + L FS DG++LY+G + + VW + TG +
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGKK 317
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 37.5 bits (83), Expect = 0.005
Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-----PTGTRIKKLKGHANFVNSVSGA 211
+ H G I L S DG T + D+ V ++DV R+ + G +V
Sbjct: 110 RSHLGPIEGLAVSIDGLLCCTISNDHAVKIYDVVNYDMMAMIRLPYIPGAVEWVYKQGDV 169
Query: 212 RRGPELLVSASDDNTIKLWDAR--KRNPVASFD-SSYPVTSVLFNDTAEKILSSGVDNVI 382
+ +L VS D + ++D R P+AS + P+ + +N ++ ++S +I
Sbjct: 170 K--AKLAVSDRDSLFVHIYDPRSGSNEPIASKEIHMNPIKVMKYNPVSDTMISGDTKGII 227
Query: 383 KMW-----DIRNNQISLKIKGHTD---------TVTGLSLSWDGAYLLSNSMDNTLRI 514
+ W ++++ K+K T+ T++ + +S DG + D +R+
Sbjct: 228 EYWSATTLQFPEDEVNFKLKSDTNLFEIIKCKTTISAIEVSPDGKQFSITAPDRRIRV 285
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 281 RNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSL 460
R A D YPV S+ F+ + G D + +WD N + + + +++ LS
Sbjct: 232 RKSEAGRDIVYPVNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSF 291
Query: 461 SWDGAYL 481
S DG L
Sbjct: 292 SRDGQLL 298
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 244
+ + F P TG D V +WD R+ + + ++++S +R G L V++S
Sbjct: 244 VNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVASS 303
Score = 27.5 bits (58), Expect = 5.7
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H GA++ CF D S GA D V G + L H V V + + +
Sbjct: 57 HGGAVLDCCFHDDFSGFSVGA-DYKVRRIVFNVG-KEDILGTHDKAVRCVEYSYAAGQ-V 113
Query: 233 VSASDDNTIKLWDAR 277
++ S D T+K WD R
Sbjct: 114 ITGSWDKTVKCWDPR 128
Score = 27.1 bits (57), Expect = 7.5
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL-VSA 241
I L FS + HL + D V ++DV T + LKG +V + S
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNS----LKGEFLHGGAVLDCCFHDDFSGFSV 75
Query: 242 SDDNTIK--LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 400
D ++ +++ K + + + D + V V ++ A ++++ D +K WD R
Sbjct: 76 GADYKVRRIVFNVGKEDILGTHDKA--VRCVEYSYAAGQVITGSWDKTVKCWDPR 128
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 37.1 bits (82), Expect = 0.007
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Frame = +2
Query: 59 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 238
G++ L FS DG HL + D V VWD+ T + K + + + L S
Sbjct: 375 GSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSSLNGALFAS 434
Query: 239 ASDDNTIKLWD-----ARKRNPVASFDS-SYPVTSVLFNDTAE--KILSSGVDNVIKM 388
+D + ++ KR P+ + D+ + + + FN A+ I+S+ N +K+
Sbjct: 435 GTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILAIVSTMNKNSVKL 492
Score = 33.1 bits (72), Expect = 0.11
Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 3/146 (2%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGT--RIKKLKGHANFVNSVSGARRGPELLVS 238
I + F P+GS + +D+ +I L G + +
Sbjct: 291 IRKAAFLPNGSQVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAF 350
Query: 239 ASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISL 418
++ I L + + + + + V S+ F++ + +LSSG D + +WD+R +
Sbjct: 351 VGNEGYILLVSTKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLY 410
Query: 419 KIKGHTDTV-TGLSLSWDGAYLLSNS 493
K T T L S +GA S +
Sbjct: 411 KGVDEGSTCGTSLCSSLNGALFASGT 436
>At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat family
protein
Length = 454
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +2
Query: 59 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 238
G I +CF+ + + G T V+ WD+ R+ + + N V S+ R ++V+
Sbjct: 304 GGIQTICFNQGTNLAFIGTTGGYVSCWDLRKMDRLWEKRVSPNVVYSIQQLRNDTSVMVA 363
Query: 239 ASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFN 337
D +++ D + ++ D + TS N
Sbjct: 364 GGIDGVLRMIDQKSGRVLSRVIMDDKFSTTSTRNN 398
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 37.1 bits (82), Expect = 0.007
Identities = 24/116 (20%), Positives = 51/116 (43%)
Frame = +2
Query: 62 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 241
A+ +L FSP ++L + D+ + ++DV + + +L A ++ ++
Sbjct: 15 AVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCF---ENESTSFTS 71
Query: 242 SDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 409
D I+ +D TS++++ +++S+G D IK WD R +
Sbjct: 72 GSDGFIRRYDLNAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRE 127
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 37.1 bits (82), Expect = 0.007
Identities = 24/116 (20%), Positives = 51/116 (43%)
Frame = +2
Query: 62 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 241
A+ +L FSP ++L + D+ + ++DV + + +L A ++ ++
Sbjct: 15 AVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCF---ENESTSFTS 71
Query: 242 SDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 409
D I+ +D TS++++ +++S+G D IK WD R +
Sbjct: 72 GSDGFIRRYDLNAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRE 127
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 36.7 bits (81), Expect = 0.009
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 65 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
+ LC+ PDG + G D T+++ DV G ++ LK H
Sbjct: 67 VTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPH 105
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 36.3 bits (80), Expect = 0.012
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Frame = +2
Query: 83 SPDGSHLYTG-ATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 259
SP S TG +D T P G GH + V V+ + S DD+ +
Sbjct: 251 SPGSSFKQTGEGSDKTGGPSVGPRGI----YNGHKDTVEDVAFCPSSAQEFCSVGDDSCL 306
Query: 260 KLWDARK-RNPVASFDSSY--PVTSVLFNDTAEK-ILSSGVDNVIKMWDIRN---NQIS- 415
LWDAR +P + ++ + V +N IL+ DN ++++D RN N +
Sbjct: 307 MLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGS 366
Query: 416 --LKIKGHTDTVTGLSLSWDGAYLLSNSMDNTL 508
K +GH V + S D + + +S ++ L
Sbjct: 367 PVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGL 399
Score = 36.3 bits (80), Expect = 0.012
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Frame = +2
Query: 2 LIWNVY-GQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPT------GT 157
++W+ G + V K H + + ++P D + + TG+ DNTV V+D G+
Sbjct: 307 MLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGS 366
Query: 158 RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 271
+ K +GH V V + + S+++D + +WD
Sbjct: 367 PVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 404
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 36.3 bits (80), Expect = 0.012
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +2
Query: 302 DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYL 481
D YPV ++ F+ S G D + +WD N + + + ++ LS S DG L
Sbjct: 238 DIVYPVNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLL 297
Score = 31.5 bits (68), Expect = 0.35
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 5/122 (4%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H GA++ CF D S ++ D V D G L H V V + ++
Sbjct: 56 HGGAVLDCCFHDDSSG-FSVCADTKVRRIDFNAGKE-DVLGTHEKPVRCVEYSYAAGQV- 112
Query: 233 VSASDDNTIKLWDAR-----KRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 397
++ S D TIK WD R +R + ++ V S+ +++ + + ++D+
Sbjct: 113 ITGSWDKTIKCWDPRGASGTERTQIGTYMQPERVNSLSL--VGNRLVVATAGRHVNIYDL 170
Query: 398 RN 403
RN
Sbjct: 171 RN 172
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 35.9 bits (79), Expect = 0.016
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 353 ILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS-WDGAYLLSNSMDNTLRI 514
+LSS VD +++W + ++ +++ H VT ++ + D Y +S S+D +RI
Sbjct: 377 LLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRI 431
Score = 35.5 bits (78), Expect = 0.021
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 3/157 (1%)
Frame = +2
Query: 53 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 232
H G+I+ + FS DG +L + D V VW N + RR E
Sbjct: 256 HDGSIVVMKFSHDGKYLASAGEDCVVRVW------------------NIIEDERRDNEFE 297
Query: 233 VSASDDNTI--KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 406
V+ SD + + + D + P+ + + + L +E + V + + +
Sbjct: 298 VAESDSSCVYFGMNDKSQIEPLKTENEKIEKSRGLLRKKSESTCAVLPSKVFSISETPQH 357
Query: 407 QISLKIKGHTDTVTGLSLSW-DGAYLLSNSMDNTLRI 514
+ +GHT + L LSW + +LLS+S+D T+R+
Sbjct: 358 E----FRGHTGEI--LDLSWSEKGFLLSSSVDETVRL 388
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 35.9 bits (79), Expect = 0.016
Identities = 27/145 (18%), Positives = 61/145 (42%), Gaps = 7/145 (4%)
Frame = +2
Query: 56 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK------GHANFVNSVSGARR 217
+G + + +SPD +++G++D + WD + + ++ G ++ + S
Sbjct: 198 SGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVWSLLSL 257
Query: 218 GPELLVSASDDNTIKLWDARKRNPV-ASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 394
+LVS T++ WD+ + A + V ++ + ++ S+G D + ++
Sbjct: 258 RCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILY- 316
Query: 395 IRNNQISLKIKGHTDTVTGLSLSWD 469
++S G D S WD
Sbjct: 317 ----KLSGSTNGSQDLKPSSSQKWD 337
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 35.9 bits (79), Expect = 0.016
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 205
K + GA++ +S DG ++ TG D+ V VW + + +GH ++V+ V+
Sbjct: 342 KSYYGALLCCSWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 394
Score = 31.9 bits (69), Expect = 0.26
Identities = 18/90 (20%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 191 VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSG 367
+NS++ + G L + D ++++D + V S Y + ++ + IL+ G
Sbjct: 306 INSIAFSNDGAHL-ATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGG 364
Query: 368 VDNVIKMWDIRNNQISLKIKGHTDTVTGLS 457
D+++++W + + ++ +GH V+G++
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 394
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 35.9 bits (79), Expect = 0.016
Identities = 23/113 (20%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
++++ Q V+ AI + PDG +Y G +A +D+ TG + G
Sbjct: 242 LYDISTQRRPVLSFDFRETAITSIAEDPDGHTIYVGNASADLASFDIRTGKLLGSFLGKC 301
Query: 185 NFVNSVSGARRGP--ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFN 337
+ S+ R P +++ S D ++++D + R +++ +T ++F+
Sbjct: 302 S--GSIRSVVRHPQHQVIASCGLDRYLRVYDVKTRQLISAVFLKQHLTGLVFD 352
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 35.5 bits (78), Expect = 0.021
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 28/170 (16%)
Frame = +2
Query: 20 GQCENVMVMKGHTGAIMQLCFSPD--GSHLYTGATDNTVAVW---DVPTGTRIKKLKGHA 184
G + + + GH G + ++ ++ GS L + + D V +W + T+ H
Sbjct: 44 GGSQQLATLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHK 103
Query: 185 NFVNSVSGARRGPEL-LVSASDDNTIKLWDARKRN--PVASFDSSYPV--TSVLFN---- 337
+ VNS++ A L L S D I ++ AR + D ++PV TSV +
Sbjct: 104 SSVNSIAWAPHDIGLSLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATA 163
Query: 338 ----------DTAEKILSSGVDNVIKMWDIRNNQISL----KIKGHTDTV 445
D K+ S G DN +K+W + N + ++ HTD V
Sbjct: 164 PGALVSSGLLDPVYKLASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWV 213
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 35.5 bits (78), Expect = 0.021
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Frame = +2
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS---GVDNVIKMWD 394
+L VSA DD +K+W A + + S V++V + + + GV VI++
Sbjct: 76 KLFVSAGDDKLVKIWSADSWRCLNTVCSEKRVSAVAISSDDSHVCYADKFGVVWVIELDG 135
Query: 395 IRNNQI------SLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
I + + +L + + +T L S DG Y+LS D +R+
Sbjct: 136 INDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRV 181
Score = 33.1 bits (72), Expect = 0.11
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-----GTRIKKL-KGHANF 190
+ +++ + I L FSPDG ++ + D + V P I+ GH+ F
Sbjct: 146 KGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEF 205
Query: 191 VNSVSGARRGPEL----LVSASDDNTIKLWD 271
+ + PEL L+S S D+T++LWD
Sbjct: 206 ITCTAFVST-PELTQGYLMSGSGDSTVRLWD 235
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 29 ENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRI 163
E + V+ G G + + FS DG++LYTG D + WD+ I
Sbjct: 246 ELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDIRKSVEI 291
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 34.3 bits (75), Expect = 0.049
Identities = 26/135 (19%), Positives = 57/135 (42%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 223
+ GH+ + FS + ++ + + D T+ VW++ G I+ + G ++ R P
Sbjct: 212 LTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYG----ISPQYCIRFHP 267
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 403
++N + +A K V +F + + +LF D + +I D +
Sbjct: 268 ------VNNNFLSAGNANKELTVFNFSTGRIIKKLLFEDEVTSMDHDHTGQIIFCGDGQG 321
Query: 404 NQISLKIKGHTDTVT 448
S+ + HT +++
Sbjct: 322 TVYSVSMDSHTGSLS 336
Score = 33.1 bits (72), Expect = 0.11
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 317 VTSVLFNDTAEKILSSGV-DNVIKMWDIRNNQISLK-IKGHTDTVTGLSLSWDGAYLLSN 490
VT + F + IL+ G D + + + LK + GH+ VT S + Y+ S+
Sbjct: 175 VTVLKFGHMSSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASS 234
Query: 491 SMDNTLRI 514
S+D T+R+
Sbjct: 235 SLDKTIRV 242
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 33.9 bits (74), Expect = 0.065
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 305 SSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTV 445
S PVTSV FN +L+ D + +WD++ I+ I HT V
Sbjct: 477 SQSPVTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEHTAPV 523
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +2
Query: 23 QCENVMVMKGHTGA-----IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 181
Q E+ M+ G G + +CF+ GS L G D V VWD+ + K + H
Sbjct: 462 QMESKMIWLGLQGERSQSPVTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEH 519
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 33.9 bits (74), Expect = 0.065
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +2
Query: 230 LVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEK----ILSSG--VDNVIK 385
LVS+S D T+K+W RK P+ PV S +F + E+ IL +G ++ IK
Sbjct: 356 LVSSSVDGTVKIWQDRKTQPLVVLRPHDGLPVNSAIFVTSPERPDHIILITGGPLNREIK 415
Query: 386 MW 391
+W
Sbjct: 416 IW 417
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 33.9 bits (74), Expect = 0.065
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 254 TIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIR 400
T+ +W + P+ PV+SV F+ + +SG + IK+WD+R
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLR 311
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/72 (20%), Positives = 34/72 (47%)
Frame = +2
Query: 5 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 184
+W Q V M+ H G + + F P+G + T + + +WD+ ++ + H+
Sbjct: 265 MWKPTSQAPLVQ-MQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI--HS 321
Query: 185 NFVNSVSGARRG 220
++S +++G
Sbjct: 322 FHAKTLSFSQKG 333
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 33.9 bits (74), Expect = 0.065
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 50 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 145
GH + L SPD + L TG+ D+TV +W +
Sbjct: 2666 GHCAPVTCLALSPDNNFLVTGSRDSTVLLWRI 2697
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 320 TSVLFNDTAEKILSSG-VDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSM 496
+SV+ + +I++ G DN IK+ + GH VT L+LS D +L++ S
Sbjct: 2629 SSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSR 2688
Query: 497 DNTL 508
D+T+
Sbjct: 2689 DSTV 2692
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 33.5 bits (73), Expect = 0.086
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Frame = +2
Query: 230 LVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEK----ILSSG--VDNVIK 385
LVS+S D TIK+W RK P+ +PV+S F + E+ IL +G ++ +K
Sbjct: 337 LVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMK 396
Query: 386 MW 391
+W
Sbjct: 397 IW 398
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 33.5 bits (73), Expect = 0.086
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Frame = +2
Query: 230 LVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEK----ILSSG--VDNVIK 385
LVS+S D TIK+W RK P+ +PV+S F + E+ IL +G ++ +K
Sbjct: 372 LVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMK 431
Query: 386 MW 391
+W
Sbjct: 432 IW 433
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 33.5 bits (73), Expect = 0.086
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 220
V H ++ + DG+ ++TG D +W + +G + + H N ++ G
Sbjct: 68 VSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWI-PG 126
Query: 221 PELLVSASDDNTIK 262
LLV+ S D T+K
Sbjct: 127 MNLLVTGSWDKTLK 140
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 33.5 bits (73), Expect = 0.086
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 107 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR-KR 283
T +TD T +WD+ +L H V + A G + S S D +++++D R K
Sbjct: 153 TSSTDTTCTIWDIEREAVDTQLIAHDKEVFDI--AWGGVGVFASVSADGSVRVFDLRDKE 210
Query: 284 NPVASFDSSYPVTSVL 331
+ ++SS P T ++
Sbjct: 211 HSTIIYESSEPDTPLV 226
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 33.1 bits (72), Expect = 0.11
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +2
Query: 95 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG-ARRGPELLVSASDDNTIKLWD 271
+H+ G+ + +++ +G+ ++ + GH V V R +LL+S+S + ++LWD
Sbjct: 1442 NHIAVGSHAGEIKIFEASSGSMLESVSGHQAPVTLVQPYVSRDTQLLLSSSSSD-VQLWD 1500
Query: 272 ARK--RNPVASFD 304
A P SFD
Sbjct: 1501 ASSITGGPRHSFD 1513
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 32.3 bits (70), Expect = 0.20
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +2
Query: 62 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL--KGHANFVNSVSGARRGPELLV 235
A++ +SPDG H+ +G+ D + ++D+ L K H V P LLV
Sbjct: 584 ALINQSWSPDGLHISSGSADPVIHIFDIRYNAPSPSLSMKAHKKRVFKAEWHSSYP-LLV 642
Query: 236 SASDDNTI---KLW 268
S S D I KLW
Sbjct: 643 SISSDLAIGIHKLW 656
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 191 VNSVSGARRGPELLVSASDDNTIKLWDARKRN---PVASFDSSYPVTSVLFNDTAEKILS 361
+ V+ RG L +D + +WD R + D S +TSV ++ ++L
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCV-IWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLV 84
Query: 362 SGVDNVIKMWDIRNNQ 409
S D + +WD+ +
Sbjct: 85 SAADKSLTLWDVSTGE 100
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +2
Query: 317 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLSWD--GAYLLSN 490
+ V FN + + D +WD I+ +I+ + + S+SW G LL +
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVS 85
Query: 491 SMDNTLRI 514
+ D +L +
Sbjct: 86 AADKSLTL 93
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 443 VTGLSLSWDGAYLLSNSMDNTLRI 514
V + S +G YLL+NS D T+RI
Sbjct: 219 VKNIVFSRNGQYLLTNSHDRTIRI 242
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 32.3 bits (70), Expect = 0.20
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 15/113 (13%)
Frame = +2
Query: 221 PELLVSASDDNTIKLWDARKR-----NPVASFDSSYPVTSVL---FNDTAEKILSSGVDN 376
P ++SAS D T+ +W K+ N V + S+ ++ + IL+ G
Sbjct: 329 PLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCALGFYGGHWSPNSLSILAHGYGG 388
Query: 377 VIKMW-------DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLRI 514
+W + N Q+ GH VT ++ + G YLLS S D T R+
Sbjct: 389 AFHLWRNVSSSKESENWQMQKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRV 441
Score = 31.9 bits (69), Expect = 0.26
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 44 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 205
++ H I ++P G T + D TV +W V RIK++ F +SV+
Sbjct: 692 VEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIKQILVLPPFGSSVT 745
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 380 IKMWDIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMD 499
I +W++ + +++ H+ TVT L S+D LLS S D
Sbjct: 629 IWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRD 668
Score = 27.5 bits (58), Expect = 5.7
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Frame = +2
Query: 56 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVP-TG--TRIKKLKGHANFVNSVSGA----- 211
T ++ +L +P L G DN + ++ TG T + +LKGH +++ S+ +
Sbjct: 178 TLSLAELPQNPGRFALALGGLDNKIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHT 237
Query: 212 -RRGPE--LLVSASDDNTIKLW 268
P +LVS+S D I++W
Sbjct: 238 TEEIPNSIMLVSSSQDKVIRIW 259
>At5g51660.1 68418.m06405 cleavage and polyadenylation specificity
factor (CPSF) A subunit C-terminal domain-containing
protein similar to SP|Q9EPU4 Cleavage and polyadenylation
specificity factor, 160 kDa subunit (CPSF 160 kDa
subunit) {Mus musculus}; contains Pfam profile PF03178:
CPSF A subunit region
Length = 1442
Score = 31.5 bits (68), Expect = 0.35
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 140 DVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPV 319
+V T ++LKG + V S+ G LL+S+ + W+ + N VA FD+ P+
Sbjct: 1163 NVVTEVYSRELKGAISAVASIQG-----HLLISSGPKIILHKWNGTELNGVAFFDAP-PL 1216
Query: 320 TSVLFNDTAEKILSSGVDNVIKM--WDIRNNQISLKIK 427
V N IL V I W + +Q+SL K
Sbjct: 1217 YVVSMNVVKSFILLGDVHKSIYFLSWKEQGSQLSLLAK 1254
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 30.7 bits (66), Expect = 0.61
Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Frame = +2
Query: 23 QCENVM-VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT--GTRIKKLKGH---A 184
+C++V ++ T + LCF ++ + N + +DV T T K L+ +
Sbjct: 46 RCKDVQFIIDVGTEPVSSLCFKTGNENILYASCGNEIKSFDVHTLSATSWKPLESYNYNK 105
Query: 185 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAE-KI 355
+ VN V R L SA D +K+ D ++ + + + +SV F ++
Sbjct: 106 DEVNQVVCNGRS-SFLASADDSGDVKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWEV 164
Query: 356 LSSGVDNVIKMWDIRNNQISLKIKGHTDT 442
++ G+D+ + +WD + I +DT
Sbjct: 165 ITGGLDSKLVLWDFSKGRSQKIIDFGSDT 193
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 30.7 bits (66), Expect = 0.61
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 23/118 (19%)
Frame = +2
Query: 227 LLVSASDDNTIKLWDARK---RNPVASFDSSYPVTS--VLFNDTAEKILSSGVDN----- 376
+LV+ S D ++K+W + K +N V + SS+ + V N LS V N
Sbjct: 344 VLVTGSCDGSVKIWMSNKEDLQNSVEVYKSSFFLLKEVVAVNPVQVSTLSFVVSNHYNAM 403
Query: 377 ---------VIKMW----DIRNNQISLKIKGHTDTVTGLSLSWDGAYLLSNSMDNTLR 511
++W R + + H VTGL+ S+DG L S S DN +R
Sbjct: 404 HLAIGKGSGSFEVWKCEISTRKFEQIVSTNAHNQVVTGLAWSYDGRCLYSCSQDNYVR 461
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 30.3 bits (65), Expect = 0.80
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 11/123 (8%)
Frame = +2
Query: 68 MQLC--FSPDGSHLYTGATDNTVAVWDVPTGT--RIKKLKGHANFVNSVSGARRGPELLV 235
M LC + P + + G +D + +V +++ KGH + + S P L+
Sbjct: 121 MCLCLDWDPSSTSIVVGLSDGSASVVSFTDSNLETVQEWKGHDFELWTASFDLNNPNLVY 180
Query: 236 SASDDNTIKLWDARKRNPVAS--FDSS----YPVTSVLFNDT-AEKILSSGVDNVIKMWD 394
+ SDD WD R +P + F +S V + N + I + D +++WD
Sbjct: 181 TGSDDCKFSCWDIRD-SPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVWD 239
Query: 395 IRN 403
R+
Sbjct: 240 TRS 242
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 47 KGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTR 160
K HT + + +P D ++TG+ D T+ VWD + +R
Sbjct: 207 KVHTMGVCCISSNPSDPYSIFTGSYDETLRVWDTRSVSR 245
>At2g32160.2 68415.m03931 expressed protein
Length = 449
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 303 TVHTQSQVYSSMIQLRKFYPVVWTMSSKCGI 395
T+ T + ++YPV WTM KC I
Sbjct: 416 TIETTYSTNPRSMMKNRYYPVFWTMRKKCAI 446
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +2
Query: 83 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 262
+PDG G + +W +P K H V ++ R L ++ S D +K
Sbjct: 2350 NPDGGSSTDGDQNKNGMLWYIP--------KAHLGSVTKIATIPR-TSLFLTGSKDGEVK 2400
Query: 263 LWDAR 277
LWDA+
Sbjct: 2401 LWDAK 2405
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 41 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 142
+ K H G++ ++ P S TG+ D V +WD
Sbjct: 2370 IPKAHLGSVTKIATIPRTSLFLTGSKDGEVKLWD 2403
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 145
V ++ H + + + D + L TG+ D TV VWD+
Sbjct: 1039 VQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDI 1075
>At1g03380.1 68414.m00317 expressed protein
Length = 926
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV 145
V K HT I LCF P G+ L T + N + V+ +
Sbjct: 371 VSQFKAHTSPISALCFDPSGTLLVTASVCGNNINVFQI 408
>At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repeats
(PF00400) (1 weak) submitForm();
Length = 927
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 47 KGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV-PTGTR 160
+ HT I LCF P G+ L T + N + V+ + PT T+
Sbjct: 378 RAHTSPISALCFDPSGTLLVTASIHGNNINVFRIMPTPTK 417
>At3g56970.1 68416.m06340 basic helix-loop-helix (bHLH) family
protein
Length = 253
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 224 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDN 376
E+LV S +L+D ++ VAS+ S+ T + N+ ++ SS + N
Sbjct: 136 EILVRVSGQRDFELYDKQQPKAVASYLSTVSATRLGDNEVMVQVSSSKIHN 186
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 28.3 bits (60), Expect = 3.2
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 11/108 (10%)
Frame = +2
Query: 101 LYTGATDNTVAVWDVPTGT----RIKKLKGHANFVNSVSGARR---GPELLVSASDDNTI 259
L +G D+TV VW G+ L H ++V V+ A + S S+D +
Sbjct: 179 LASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKV 238
Query: 260 KLWDARKRNP----VASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 391
+W K D PV V ++ T + S +N + +W
Sbjct: 239 IIWTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVW 286
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
Pfam PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +2
Query: 89 DGSHLYTGATDNTVAVWDVPTGTRIKKLKG-HANFVNSVSG--ARRGPELLVSASDDNTI 259
DG + G+TD + V + T ++ G H + + A G LLVS D +
Sbjct: 100 DGPLVAFGSTDGVIRVLSMITWKLARRYTGGHKGSIYCLMNFMASSGEALLVSGGSDGLL 159
Query: 260 KLWDA 274
LW A
Sbjct: 160 VLWSA 164
>At5g05570.1 68418.m00605 transducin family protein / WD-40 repeat
family protein similar to unknown protein (pir||T04661);
contains Pfam PF00400: WD domain, G-beta repeat (4
copies, 2 weak)|8683726|gb|AV524198.1|AV524198
Length = 1124
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 230 LVSASDDNTIKLWDARKRNPVASFDSSYPVTS 325
LVS S++N I++WD R P +S +T+
Sbjct: 100 LVSISNENEIQVWDLDLRQPASSLKWESNITA 131
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 65 IMQLCF-SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 235
I LC+ S DGS L G D + WD G + K H + S +R P +++
Sbjct: 258 ISSLCWASTDGSVLAVGYVDGDILFWDFSDGQK-GKPSNHVVKLQLSSAEKRLPVIVM 314
>At4g33440.1 68417.m04751 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein weak
similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15)
(Pectinase) {Agrobacterium tumefaciens}; contains
PF00295: Glycosyl hydrolases family 28
Length = 475
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +2
Query: 116 TDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR------RGPELLVSASDDNTIKLWDAR 277
T + VWD G RIK KG ++++++ + P S S+D++ WD +
Sbjct: 332 TVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDHSDDKWDPK 391
>At3g17150.1 68416.m02188 invertase/pectin methylesterase inhibitor
family protein low similarity to SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 272
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 293 ASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR-NNQISLKIKGHTD 439
A F S P+T L+ND+A++ ++ +++ M + QI ++G D
Sbjct: 144 AQFGGSSPLTGPLYNDSAKETVTKPYASLLSMLILEAKPQIYKNVRGRVD 193
>At3g52910.1 68416.m05831 expressed protein nearly identical to
transcription activator GRL4 [Arabidopsis thaliana]
GI:21539886 (unpublished)
Length = 548
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 40 GDERSHGSNNAALLLTGWFTFVHWSYGQYCSS 135
G+E HG NN +G +H S+ Q CSS
Sbjct: 214 GEELGHGPNNNHFFSSGSSQPLHLSHQQSCSS 245
>At5g41330.1 68418.m05023 potassium channel tetramerisation
domain-containing protein contains Pfam profile PF02214:
K+ channel tetramerisation domain
Length = 458
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 362 SGVDNVIKMWDIRNNQISLKIKGHTDTVTGLSLS 463
SGV+ I+ WD+R+ + +IK D + +++S
Sbjct: 286 SGVNGHIRFWDVRSRNMVWEIKEAQDCFSDVTVS 319
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 122 NTVAVWDVPTGTR-IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 271
N V + D+ + T + +L+ H VN+++ A + + + S DD +W+
Sbjct: 243 NKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWE 293
Score = 27.1 bits (57), Expect = 7.5
Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDVPT 151
V ++ H ++ + ++P H+ +G D +W++PT
Sbjct: 257 VAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 296
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 122 NTVAVWDVPTGTR-IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 271
N V + D+ + T + +L+ H VN+++ A + + + S DD +W+
Sbjct: 243 NKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWE 293
Score = 27.1 bits (57), Expect = 7.5
Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 35 VMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDVPT 151
V ++ H ++ + ++P H+ +G D +W++PT
Sbjct: 257 VAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 296
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,188,767
Number of Sequences: 28952
Number of extensions: 249987
Number of successful extensions: 2163
Number of sequences better than 10.0: 257
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1612
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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