Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31858
         (502 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3SE90 Cluster: UNC119 homologue, putative; n=10; Oligo...    33   3.6  
UniRef50_Q38CA2 Cluster: Serine/threonine-protein kinase, putati...    33   4.8  
UniRef50_Q9FJ11 Cluster: Disease resistance protein-like; n=2; A...    32   6.3  

>UniRef50_Q3SE90 Cluster: UNC119 homologue, putative; n=10;
           Oligohymenophorea|Rep: UNC119 homologue, putative -
           Paramecium tetraurelia
          Length = 187

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -1

Query: 502 NFTILTHYYTRVIILLNRKFDFTFDARIWDEISAWEHVH 386
           NFTI+  +Y R ++L  R ++F F   I +  + WEH++
Sbjct: 104 NFTIIERHYFRNVLL--RSYEFQFPFCIPNSTNTWEHIY 140


>UniRef50_Q38CA2 Cluster: Serine/threonine-protein kinase, putative;
           n=1; Trypanosoma brucei|Rep: Serine/threonine-protein
           kinase, putative - Trypanosoma brucei
          Length = 987

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +2

Query: 56  GTESVGSVFLGSDTSPHREWYVNLI 130
           G+ S GSVFL  DT P  EWY  L+
Sbjct: 40  GSGSFGSVFLSHDTLPGSEWYGQLV 64


>UniRef50_Q9FJ11 Cluster: Disease resistance protein-like; n=2;
           Arabidopsis thaliana|Rep: Disease resistance
           protein-like - Arabidopsis thaliana (Mouse-ear cress)
          Length = 888

 Score = 32.3 bits (70), Expect = 6.3
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -2

Query: 225 LSASNPDLETILNFNFQFSIFMVVKKTHSLHQIRFTYHSLWGLVSD 88
           L  +NP+LE +   N  F+IF +    H+L  + F+ +++ GL  D
Sbjct: 342 LLENNPELEVLQLKNNSFTIFQMPTSVHNLQVLDFSENNIGGLFPD 387


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,790,373
Number of Sequences: 1657284
Number of extensions: 8808117
Number of successful extensions: 19315
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19311
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)