Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31858
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   4.7  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   4.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   4.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   4.7  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +2

Query: 20  TNPKANNVNTLNGTESVGS 76
           TN   N  N  NG  SVGS
Sbjct: 135 TNNNTNFNNNSNGASSVGS 153


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = -1

Query: 439 FTFDARIWDEISAWEHV 389
           F+ + ++W +I AW ++
Sbjct: 32  FSLEHQLWQKIQAWTYL 48


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +2

Query: 20  TNPKANNVNTLNGTESVGS 76
           TN   N  N  NG  SVGS
Sbjct: 83  TNNNTNFNNNSNGASSVGS 101


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +2

Query: 20  TNPKANNVNTLNGTESVGS 76
           TN   N  N  NG  SVGS
Sbjct: 266 TNNNTNFNNNSNGASSVGS 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,959
Number of Sequences: 336
Number of extensions: 2508
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)