Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31858
(502 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003383-1|AAB54234.1| 379|Caenorhabditis elegans Hypothetical ... 28 4.4
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 27 5.8
U67954-8|AAB52608.2| 782|Caenorhabditis elegans Sulfate permeas... 27 5.8
AY954524-1|AAX34432.2| 762|Caenorhabditis elegans anion transpo... 27 5.8
AY887909-1|AAX34421.1| 782|Caenorhabditis elegans anion transpo... 27 5.8
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr... 27 7.6
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 7.6
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 7.6
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 7.6
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 7.6
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 7.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 7.6
>AF003383-1|AAB54234.1| 379|Caenorhabditis elegans Hypothetical
protein ZC250.2 protein.
Length = 379
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = +2
Query: 317 WGNTCLVARYI*DTFTDG*ETLNV----DVFPCGDLVPYACVECKIEFP 451
W + A+Y F E L + D F CGD + V+C I FP
Sbjct: 98 WSGFAIDAKYEFAQFLHKWENLRLHHHPDYFCCGDTIDSCIVKCSIPFP 146
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical
protein K03H1.5 protein.
Length = 1385
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 325 HMFSCALYLRHLYGWVGNTKRGRVPMR 405
H F A Y ++ W+GNTK V R
Sbjct: 191 HSFVAAFYADAMFQWIGNTKISNVFFR 217
>U67954-8|AAB52608.2| 782|Caenorhabditis elegans Sulfate permease
family protein 3 protein.
Length = 782
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 123 FTYHSLWGLVSDPRKT-LPTDSVPFNVFTLLAFGFVNVXPW 4
+ Y+ +W LV + +PT + + F L FG + PW
Sbjct: 262 YLYYRIWDLVENLDNVHIPTVCISLSSFLFLVFGKEYLAPW 302
>AY954524-1|AAX34432.2| 762|Caenorhabditis elegans anion
transporter SULP-3b protein.
Length = 762
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 123 FTYHSLWGLVSDPRKT-LPTDSVPFNVFTLLAFGFVNVXPW 4
+ Y+ +W LV + +PT + + F L FG + PW
Sbjct: 262 YLYYRIWDLVENLDNVHIPTVCISLSSFLFLVFGKEYLAPW 302
>AY887909-1|AAX34421.1| 782|Caenorhabditis elegans anion
transporter SULP-3a protein.
Length = 782
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 123 FTYHSLWGLVSDPRKT-LPTDSVPFNVFTLLAFGFVNVXPW 4
+ Y+ +W LV + +PT + + F L FG + PW
Sbjct: 262 YLYYRIWDLVENLDNVHIPTVCISLSSFLFLVFGKEYLAPW 302
>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical
protein F54F11.2 protein.
Length = 1589
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 377 TLNVDVFPCGDLVPYACVECK--IEFPIQ*NNNT 472
++N+ V PC D Y C K + F I N+NT
Sbjct: 107 SVNLSVDPCNDFYAYTCGNFKGDMSFDISDNSNT 140
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 35 NNVNTLNGTESVGSVFLGSDTSPHREWYVN 124
+NV GT+ V V D P WY+N
Sbjct: 2761 SNVRARTGTKVVHKVVFTGDPKPSLTWYIN 2790
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 35 NNVNTLNGTESVGSVFLGSDTSPHREWYVN 124
+NV GT+ V V D P WY+N
Sbjct: 2121 SNVRARTGTKVVHKVVFTGDPKPSLTWYIN 2150
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 35 NNVNTLNGTESVGSVFLGSDTSPHREWYVN 124
+NV GT+ V V D P WY+N
Sbjct: 2761 SNVRARTGTKVVHKVVFTGDPKPSLTWYIN 2790
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 35 NNVNTLNGTESVGSVFLGSDTSPHREWYVN 124
+NV GT+ V V D P WY+N
Sbjct: 2761 SNVRARTGTKVVHKVVFTGDPKPSLTWYIN 2790
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 35 NNVNTLNGTESVGSVFLGSDTSPHREWYVN 124
+NV GT+ V V D P WY+N
Sbjct: 2121 SNVRARTGTKVVHKVVFTGDPKPSLTWYIN 2150
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 35 NNVNTLNGTESVGSVFLGSDTSPHREWYVN 124
+NV GT+ V V D P WY+N
Sbjct: 2761 SNVRARTGTKVVHKVVFTGDPKPSLTWYIN 2790
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,913,231
Number of Sequences: 27780
Number of extensions: 222611
Number of successful extensions: 484
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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