BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV31857 (516 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0855 + 8023266-8023459,8023830-8023866,8023911-8023966,802... 28 5.1 01_01_0129 + 1180354-1180959 27 6.8 >12_01_0855 + 8023266-8023459,8023830-8023866,8023911-8023966, 8025102-8026215 Length = 466 Score = 27.9 bits (59), Expect = 5.1 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -2 Query: 278 HGDGICGTAYNAIEVSVAYDVELPYSQY 195 HG + +YNA VS+A D+ELP++ Y Sbjct: 345 HGGTVIKFSYNA--VSLAQDMELPFAAY 370 >01_01_0129 + 1180354-1180959 Length = 201 Score = 27.5 bits (58), Expect = 6.8 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -3 Query: 214 SFHIVNISSPEWKRVTNGGSTQNNSEN 134 SFH +S WKR+ GG + + + Sbjct: 101 SFHAATAASSSWKRIATGGGRRRDGSH 127 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,929,907 Number of Sequences: 37544 Number of extensions: 220759 Number of successful extensions: 456 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 447 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 456 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1118831240 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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