Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31857
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0855 + 8023266-8023459,8023830-8023866,8023911-8023966,802...    28   5.1  
01_01_0129 + 1180354-1180959                                           27   6.8  

>12_01_0855 +
           8023266-8023459,8023830-8023866,8023911-8023966,
           8025102-8026215
          Length = 466

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 278 HGDGICGTAYNAIEVSVAYDVELPYSQY 195
           HG  +   +YNA  VS+A D+ELP++ Y
Sbjct: 345 HGGTVIKFSYNA--VSLAQDMELPFAAY 370


>01_01_0129 + 1180354-1180959
          Length = 201

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 214 SFHIVNISSPEWKRVTNGGSTQNNSEN 134
           SFH    +S  WKR+  GG  + +  +
Sbjct: 101 SFHAATAASSSWKRIATGGGRRRDGSH 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,929,907
Number of Sequences: 37544
Number of extensions: 220759
Number of successful extensions: 456
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)