Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31857
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030177-1|ABN49316.1|   77|Drosophila melanogaster IP17824p pro...    29   3.7  
AE014134-3336|ABI31325.1|   77|Drosophila melanogaster CG34136-P...    29   3.7  
AY119587-1|AAM50241.1| 1235|Drosophila melanogaster LD15137p pro...    28   8.6  
AE014298-1783|AAN09311.1| 1257|Drosophila melanogaster CG1848-PC...    28   8.6  
AE014298-1782|AAF48176.2| 1235|Drosophila melanogaster CG1848-PA...    28   8.6  
AB042818-1|BAB17234.1| 1257|Drosophila melanogaster LIM-kinase1 ...    28   8.6  
AB042816-1|BAB17233.1| 1235|Drosophila melanogaster LIM-kinase1 ...    28   8.6  

>BT030177-1|ABN49316.1|   77|Drosophila melanogaster IP17824p
           protein.
          Length = 77

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 224 MQQIPQWHCMRY 259
           M ++PQWHC+RY
Sbjct: 35  MPKVPQWHCLRY 46


>AE014134-3336|ABI31325.1|   77|Drosophila melanogaster CG34136-PA
           protein.
          Length = 77

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 224 MQQIPQWHCMRY 259
           M ++PQWHC+RY
Sbjct: 35  MPKVPQWHCLRY 46


>AY119587-1|AAM50241.1| 1235|Drosophila melanogaster LD15137p
           protein.
          Length = 1235

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 239 QWHCMRYRRFHPHGHCSRWHLMRRA*IYPSQN*Y 340
           QWHC  +R     GH   W+  R   +Y  ++ Y
Sbjct: 55  QWHCDCFRCSVCEGHLHNWYFEREGLLYCREDYY 88


>AE014298-1783|AAN09311.1| 1257|Drosophila melanogaster CG1848-PC,
           isoform C protein.
          Length = 1257

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 239 QWHCMRYRRFHPHGHCSRWHLMRRA*IYPSQN*Y 340
           QWHC  +R     GH   W+  R   +Y  ++ Y
Sbjct: 55  QWHCDCFRCSVCEGHLHNWYFEREGLLYCREDYY 88


>AE014298-1782|AAF48176.2| 1235|Drosophila melanogaster CG1848-PA,
           isoform A protein.
          Length = 1235

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 239 QWHCMRYRRFHPHGHCSRWHLMRRA*IYPSQN*Y 340
           QWHC  +R     GH   W+  R   +Y  ++ Y
Sbjct: 55  QWHCDCFRCSVCEGHLHNWYFEREGLLYCREDYY 88


>AB042818-1|BAB17234.1| 1257|Drosophila melanogaster LIM-kinase1
           protein.
          Length = 1257

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 239 QWHCMRYRRFHPHGHCSRWHLMRRA*IYPSQN*Y 340
           QWHC  +R     GH   W+  R   +Y  ++ Y
Sbjct: 55  QWHCDCFRCSVCEGHLHNWYFEREGLLYCREDYY 88


>AB042816-1|BAB17233.1| 1235|Drosophila melanogaster LIM-kinase1
           protein.
          Length = 1235

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 239 QWHCMRYRRFHPHGHCSRWHLMRRA*IYPSQN*Y 340
           QWHC  +R     GH   W+  R   +Y  ++ Y
Sbjct: 55  QWHCDCFRCSVCEGHLHNWYFEREGLLYCREDYY 88


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,433,272
Number of Sequences: 53049
Number of extensions: 398578
Number of successful extensions: 880
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)