Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31857
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.5  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   10.0 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   10.0 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   10.0 

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = -3

Query: 319 YLGSPHQVPATAVSMGMESAVPHTMPLRYLL 227
           Y+  PHQ+ +    + +    P   PL++L+
Sbjct: 611 YITEPHQIFSFPARLSLPKGQPQGFPLQFLV 641


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 135 FSELFCVLPPFVTRFHSGLEILTI 206
           F E FC++  F     +   +LTI
Sbjct: 122 FGEAFCIIQSFAAETSANATVLTI 145


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 368 LTCWLAF*IHINFV 327
           L+CWL    H NF+
Sbjct: 119 LSCWLQMTKHHNFI 132


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 343 FILIL*RVYLGSPHQVPATAVSM 275
           F+L L R +L +P  +PA   S+
Sbjct: 389 FVLALVRPFLKNPDAIPAFLSSL 411


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 258 TADSIPMDTAVAGT 299
           T  S+P+ +AVAGT
Sbjct: 53  TPPSVPVGSAVAGT 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,820
Number of Sequences: 438
Number of extensions: 2661
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)