Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31854
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    54   8e-10
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    44   1e-06
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   4.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 54.0 bits (124), Expect = 8e-10
 Identities = 29/87 (33%), Positives = 45/87 (51%)
 Frame = +2

Query: 107 LPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERINGGMFVYAFTAACFH 286
           L R E F        + A K+ R+   A+  D  +  A + R+R+N  +F YAF+ A  H
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 287 RTDCKGLYLPAPYEIYPYFFVDSHVIS 367
           R D + L LP+   ++P  +VDS V +
Sbjct: 134 RPDTQNLDLPSFIHVFPDKYVDSQVFA 160


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 43.6 bits (98), Expect = 1e-06
 Identities = 20/59 (33%), Positives = 34/59 (57%)
 Frame = +2

Query: 191 KDFDVFMRTACWMRERINGGMFVYAFTAACFHRTDCKGLYLPAPYEIYPYFFVDSHVIS 367
           ++ D  +  A + R+R+N  +F YA + A  HR D + + LP+  E +P  +VDS V +
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFA 160



 Score = 24.2 bits (50), Expect = 0.70
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 418 PEDRVLGGFSHLHHKGFTDDMAVNEE 341
           P   V   F+HL H+ FT  + VN +
Sbjct: 466 PRGSVFVRFTHLQHQPFTYKITVNNQ 491


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 259 DEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 152
           D   ++ P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 28  NIEXKLRQVHECRCR 72
           N    LRQV  CRC+
Sbjct: 166 NFNVFLRQVFTCRCK 180


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 507 TSFWDKERRTP 475
           T+ WD E++TP
Sbjct: 316 TTVWDDEQKTP 326


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 467 WRKGVRRSLSQND 505
           W+  +R SLS ND
Sbjct: 184 WQNSIRHSLSFND 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,273
Number of Sequences: 336
Number of extensions: 2131
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)