Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31849
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1247 + 35233756-35233785,35234902-35236107                       29   2.9  
11_02_0111 + 8396304-8396378,8396697-8397113,8397220-8397483,839...    27   6.8  

>02_05_1247 + 35233756-35233785,35234902-35236107
          Length = 411

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 39  HAGLSKGETEVSTRRAHATLPLRRS 113
           H  +SKG+  ++ RR    LPLRRS
Sbjct: 346 HVSISKGDECIAVRRDRNVLPLRRS 370


>11_02_0111 +
           8396304-8396378,8396697-8397113,8397220-8397483,
           8398237-8398608
          Length = 375

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +1

Query: 1   SDGVTRTFPLSRYTPVSPREKLKSLLAEHMPRSLYEGLYTD*KIFCSNF 147
           ++G++ T         S R  ++SL+A H    + E L+T   +F  NF
Sbjct: 306 AEGISATHTAGESMSASLRAAMESLIASHFGEGILEELFT---VFARNF 351


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,415,501
Number of Sequences: 37544
Number of extensions: 195457
Number of successful extensions: 375
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)