Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31841
         (302 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3D0A6 Cluster: Membrane protein, putative; n=9; Strept...    31   3.8  
UniRef50_P59462 Cluster: Triosephosphate isomerase; n=1; Buchner...    31   3.8  
UniRef50_Q8STU9 Cluster: Similarity to HYPOTHETICAL INTEGRAL MEM...    31   5.1  

>UniRef50_Q3D0A6 Cluster: Membrane protein, putative; n=9;
           Streptococcus|Rep: Membrane protein, putative -
           Streptococcus agalactiae H36B
          Length = 330

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = +2

Query: 71  LV*SNLTQLFNNALTIFAIVRTFELSFQFMYIIFGVYSFRIDLHI 205
           ++ S L  + NN +  F++ + FE+++  +  I G Y  RIDL+I
Sbjct: 141 IIFSILPAVLNNRVPEFSLSKGFEMTWLLILYIIGAYLKRIDLNI 185


>UniRef50_P59462 Cluster: Triosephosphate isomerase; n=1; Buchnera
           aphidicola (Baizongia pistaciae)|Rep: Triosephosphate
           isomerase - Buchnera aphidicola subsp. Baizongia
           pistaciae
          Length = 252

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -3

Query: 171 KIIYINWKLNSKVRTIAKIVKALLNNWVK 85
           KII  NWKLN  ++ +  ++K L+N +++
Sbjct: 4   KIIIANWKLNGNIQLLQTLLKPLVNFYIR 32


>UniRef50_Q8STU9 Cluster: Similarity to HYPOTHETICAL INTEGRAL
           MEMBRANE PROTEIN YA35_SCHPO; n=1; Encephalitozoon
           cuniculi|Rep: Similarity to HYPOTHETICAL INTEGRAL
           MEMBRANE PROTEIN YA35_SCHPO - Encephalitozoon cuniculi
          Length = 393

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 64  CHSSLIKLDPIIQQCFNNFCYCSYF*IKLPIYVYNFWSLLL*NR 195
           C S+ I   P +   FN + +     + LP+  + ++SLL+ NR
Sbjct: 203 CRSNSILFAPFVMYPFNRYVFIRIAVVLLPLAAFQYYSLLMINR 246


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,593,612
Number of Sequences: 1657284
Number of extensions: 5114079
Number of successful extensions: 8737
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8736
length of database: 575,637,011
effective HSP length: 77
effective length of database: 448,026,143
effective search space used: 10304601289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)