Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31841
         (302 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034947-1|AAH34947.1|  716|Homo sapiens leucine rich repeat neu...    28   6.2  
AY358312-1|AAQ88679.1|  716|Homo sapiens NLRR protein.                 28   6.2  
AK023273-1|BAB14500.1|  431|Homo sapiens protein ( Homo sapiens ...    28   6.2  
AB074161-1|BAE45733.1|  716|Homo sapiens neuronal leucine-rich r...    28   6.2  
AB040930-1|BAA96021.1|  730|Homo sapiens KIAA1497 protein protein.     28   6.2  

>BC034947-1|AAH34947.1|  716|Homo sapiens leucine rich repeat
           neuronal 1 protein.
          Length = 716

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = -3

Query: 294 RVTCAIRRITHFVSHGSTILVPIIFIPRAYICKSILKE*TPKIIYINWKLNSKVRT 127
           R TC  + +    +  +TI V    +    + K  +K+     I ++WK+NS V T
Sbjct: 496 RYTCVAQNVQGADTRVATIKVNGTLLDGTQVLKIYVKQTESHSILVSWKVNSNVMT 551


>AY358312-1|AAQ88679.1|  716|Homo sapiens NLRR protein.
          Length = 716

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = -3

Query: 294 RVTCAIRRITHFVSHGSTILVPIIFIPRAYICKSILKE*TPKIIYINWKLNSKVRT 127
           R TC  + +    +  +TI V    +    + K  +K+     I ++WK+NS V T
Sbjct: 496 RYTCVAQNVQGADTRVATIKVNGTLLDGTQVLKIYVKQTESHSILVSWKVNSNVMT 551


>AK023273-1|BAB14500.1|  431|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13211 fis, clone NT2RP4000907, highly similar to
           Mouse NLRR-1 mRNA for leucine-rich-repeat protein. ).
          Length = 431

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = -3

Query: 294 RVTCAIRRITHFVSHGSTILVPIIFIPRAYICKSILKE*TPKIIYINWKLNSKVRT 127
           R TC  + +    +  +TI V    +    + K  +K+     I ++WK+NS V T
Sbjct: 211 RYTCVAQNVQGADTRVATIKVNGTLLDGTQVLKIYVKQTESHSILVSWKVNSNVMT 266


>AB074161-1|BAE45733.1|  716|Homo sapiens neuronal leucine-rich
           repeat protein-1 protein.
          Length = 716

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = -3

Query: 294 RVTCAIRRITHFVSHGSTILVPIIFIPRAYICKSILKE*TPKIIYINWKLNSKVRT 127
           R TC  + +    +  +TI V    +    + K  +K+     I ++WK+NS V T
Sbjct: 496 RYTCVAQNVQGADTRVATIKVNGTLLDGTQVLKIYVKQTESHSILVSWKVNSNVMT 551


>AB040930-1|BAA96021.1|  730|Homo sapiens KIAA1497 protein protein.
          Length = 730

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = -3

Query: 294 RVTCAIRRITHFVSHGSTILVPIIFIPRAYICKSILKE*TPKIIYINWKLNSKVRT 127
           R TC  + +    +  +TI V    +    + K  +K+     I ++WK+NS V T
Sbjct: 510 RYTCVAQNVQGADTRVATIKVNGTLLDGTQVLKIYVKQTESHSILVSWKVNSNVMT 565


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,175,869
Number of Sequences: 237096
Number of extensions: 791871
Number of successful extensions: 1036
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)