Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31841
         (302 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003553-1|AAO39557.1|  340|Drosophila melanogaster LP10386p pro...    27   3.4  
AY069592-1|AAL39737.2|  353|Drosophila melanogaster LD34179p pro...    27   3.4  
AL031766-2|CAA21132.1|  339|Drosophila melanogaster EG:84H4.1 pr...    27   3.4  
AF236156-1|AAF60321.1|  339|Drosophila melanogaster torsin-like ...    27   3.4  
AE014298-655|AAF45969.2|  340|Drosophila melanogaster CG3024-PA ...    27   3.4  

>BT003553-1|AAO39557.1|  340|Drosophila melanogaster LP10386p
           protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 15/76 (19%), Positives = 37/76 (48%)
 Frame = -3

Query: 300 AFRVTCAIRRITHFVSHGSTILVPIIFIPRAYICKSILKE*TPKIIYINWKLNSKVRTIA 121
           A+ +   +++ T   SH     +P + + +A++ K +  E       + W+ + K     
Sbjct: 250 AYNMDGGMKKTTMIESHVIDHFIPFLPMEKAHVIKCLEAE------LLRWRRDPKQANNQ 303

Query: 120 KIVKALLNNWVKFD*T 73
           KI++ ++N+ + +D T
Sbjct: 304 KIIEDIINSSISYDRT 319


>AY069592-1|AAL39737.2|  353|Drosophila melanogaster LD34179p
           protein.
          Length = 353

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 15/76 (19%), Positives = 37/76 (48%)
 Frame = -3

Query: 300 AFRVTCAIRRITHFVSHGSTILVPIIFIPRAYICKSILKE*TPKIIYINWKLNSKVRTIA 121
           A+ +   +++ T   SH     +P + + +A++ K +  E       + W+ + K     
Sbjct: 263 AYNMDGGMKKTTMIESHVIDHFIPFLPMEKAHVIKCLEAE------LLRWRRDPKQANNQ 316

Query: 120 KIVKALLNNWVKFD*T 73
           KI++ ++N+ + +D T
Sbjct: 317 KIIEDIINSSISYDRT 332


>AL031766-2|CAA21132.1|  339|Drosophila melanogaster EG:84H4.1
           protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 15/76 (19%), Positives = 37/76 (48%)
 Frame = -3

Query: 300 AFRVTCAIRRITHFVSHGSTILVPIIFIPRAYICKSILKE*TPKIIYINWKLNSKVRTIA 121
           A+ +   +++ T   SH     +P + + +A++ K +  E       + W+ + K     
Sbjct: 249 AYNMDGGMKKTTMIESHVIDHFIPFLPMEKAHVIKCLEAE------LLRWRRDPKQANNQ 302

Query: 120 KIVKALLNNWVKFD*T 73
           KI++ ++N+ + +D T
Sbjct: 303 KIIEDIINSSISYDRT 318


>AF236156-1|AAF60321.1|  339|Drosophila melanogaster torsin-like
           protein protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 15/76 (19%), Positives = 37/76 (48%)
 Frame = -3

Query: 300 AFRVTCAIRRITHFVSHGSTILVPIIFIPRAYICKSILKE*TPKIIYINWKLNSKVRTIA 121
           A+ +   +++ T   SH     +P + + +A++ K +  E       + W+ + K     
Sbjct: 249 AYNMDGGMKKTTMIESHVIDHFIPFLPMEKAHVIKCLEAE------LLRWRRDPKQANNQ 302

Query: 120 KIVKALLNNWVKFD*T 73
           KI++ ++N+ + +D T
Sbjct: 303 KIIEDIINSSISYDRT 318


>AE014298-655|AAF45969.2|  340|Drosophila melanogaster CG3024-PA
           protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 15/76 (19%), Positives = 37/76 (48%)
 Frame = -3

Query: 300 AFRVTCAIRRITHFVSHGSTILVPIIFIPRAYICKSILKE*TPKIIYINWKLNSKVRTIA 121
           A+ +   +++ T   SH     +P + + +A++ K +  E       + W+ + K     
Sbjct: 250 AYNMDGGMKKTTMIESHVIDHFIPFLPMEKAHVIKCLEAE------LLRWRRDPKQANNQ 303

Query: 120 KIVKALLNNWVKFD*T 73
           KI++ ++N+ + +D T
Sbjct: 304 KIIEDIINSSISYDRT 319


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,936,846
Number of Sequences: 53049
Number of extensions: 230046
Number of successful extensions: 465
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)