Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31836
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032635-3|CAB63374.1|  635|Caenorhabditis elegans Hypothetical ...    28   3.4  
Z81030-4|CAB02708.1|   89|Caenorhabditis elegans Hypothetical pr...    27   6.0  

>AL032635-3|CAB63374.1|  635|Caenorhabditis elegans Hypothetical
           protein Y51A2A.5 protein.
          Length = 635

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 307 YQLLLNYVLSYAEKWMXXXXXXXXXXXSKCRTKPFLYPI 423
           Y++L NY++SY +               +CRT  F+ P+
Sbjct: 88  YEILKNYIISYIQDMEESKELYFAGIVDRCRTDIFIQPM 126


>Z81030-4|CAB02708.1|   89|Caenorhabditis elegans Hypothetical
           protein C01G10.6 protein.
          Length = 89

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 314 YY*ITFYHTQKNG*TISTSF*KNENRNAEPSRFYIQYNNG 433
           YY   +Y T  NG      +  N N N + + +Y   NNG
Sbjct: 20  YYLYYYYPTNNNGYQTYYYYPNNNNNNGQNTYYYDNGNNG 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,201,896
Number of Sequences: 27780
Number of extensions: 186890
Number of successful extensions: 315
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)