Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31834
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF525673-2|AAM82610.1|   58|Anopheles gambiae cecropin CecA prot...    24   2.6  
AF200686-1|AAF22649.1|   58|Anopheles gambiae cecropin precursor...    24   2.6  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.1  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.1  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   6.1  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   6.1  

>AF525673-2|AAM82610.1|   58|Anopheles gambiae cecropin CecA
           protein.
          Length = 58

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 47  IKFSRIWIFIYLMILFISKQRE 112
           + FS+I+IF+ L +L +  Q E
Sbjct: 1   MNFSKIFIFVVLAVLLLCSQTE 22


>AF200686-1|AAF22649.1|   58|Anopheles gambiae cecropin precursor
           protein.
          Length = 58

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 47  IKFSRIWIFIYLMILFISKQRE 112
           + FS+I+IF+ L +L +  Q E
Sbjct: 1   MNFSKIFIFVVLAVLLLCSQTE 22


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/48 (18%), Positives = 25/48 (52%)
 Frame = +2

Query: 221 ELPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLSYL 364
           E+P    +  Y C  +  + ++    +RR   +  +++++P + +S+L
Sbjct: 213 EVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFL 260


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/48 (18%), Positives = 25/48 (52%)
 Frame = +2

Query: 221 ELPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLSYL 364
           E+P    +  Y C  +  + ++    +RR   +  +++++P + +S+L
Sbjct: 213 EVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFL 260


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +1

Query: 172 LRPMRCDVLVFELTKKRAPWLILPVVICLSQRLSHACLSASRIKAIPRMAQYI 330
           LR    D+L+  LT +    +  P  +    +L+HA  S   +KA P + Q +
Sbjct: 307 LRLSSIDLLLQSLTAENGTLVQDPEYVYRLSQLAHAMPSLVDVKAHPDLQQSV 359


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 172  LRPMRCDVLVFELTKKRA 225
            +R  R D+LV+E  KKRA
Sbjct: 1098 IRANRPDILVYEKRKKRA 1115


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,548
Number of Sequences: 2352
Number of extensions: 8110
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)