Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31833
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0042 - 7672565-7672729,7672902-7672977,7673409-7674132,767... 32 0.24
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 31 0.55
11_06_0211 + 21305535-21305895,21306512-21306761,21307543-213076... 29 1.7
04_04_1023 + 30201374-30201487,30201601-30202285,30202402-302025... 29 1.7
01_05_0080 - 17957276-17957676,17957810-17957921,17958001-179581... 29 2.2
10_08_0263 - 16311650-16311675,16312101-16312149,16312987-163131... 29 2.9
07_03_0562 + 19535801-19535865,19535972-19536017,19536125-195362... 28 3.9
02_05_0332 - 28008205-28008520,28008630-28008841 28 3.9
09_06_0040 - 20432008-20432091,20432152-20432229,20432322-204329... 28 5.1
10_08_0459 + 18092656-18092724,18092827-18092886,18092970-180930... 27 6.8
12_02_0908 - 24214221-24215933 27 8.9
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 27 8.9
06_01_0210 - 1596578-1596868,1598550-1598828,1600503-1600511,160... 27 8.9
01_06_0880 + 32687018-32687060,32687142-32687219,32687323-326875... 27 8.9
01_05_0077 + 17928962-17929392,17929472-17929568,17929700-179297... 27 8.9
>11_02_0042 - 7672565-7672729,7672902-7672977,7673409-7674132,
7674684-7674708,7675041-7675486,7676643-7676862,
7677609-7678459,7678697-7679555
Length = 1121
Score = 32.3 bits (70), Expect = 0.24
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 8/140 (5%)
Frame = +1
Query: 112 LDRLDGKAPIVREPERE-SIRADVDNRIKSALHDMETP-NDELFDFRGARAQRGRPLSS- 282
L+RL I+ + E++ + ++ +AL + + N E+ R + Q + S
Sbjct: 649 LERLQQALKILSDAEKQIRLSSERSTWFTAALLQLGSGHNSEMIQSRSSSKQSAKATSEI 708
Query: 283 ---ALEDDEFNEDITESLKRLRASKKTS--RFADDIDFENSVTNLENRMRISDKILESVG 447
A+ + + L LR S+KT R A V ++ +RMR +D +
Sbjct: 709 VMDAVRESSASRTTAHPLFTLRGSRKTLDLRTASGHSSPQGVVSVSSRMRANDNLK---- 764
Query: 448 IGHSEVSSARRALQDNEERT 507
H E S R LQD+ +R+
Sbjct: 765 --HGECRSVDRVLQDSAQRS 782
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 31.1 bits (67), Expect = 0.55
Identities = 32/127 (25%), Positives = 53/127 (41%)
Frame = +1
Query: 10 GTENKAXMSRVGRTRRTRVYDCNYNKGESYYRPVLDRLDGKAPIVREPERESIRADVDNR 189
GT++ + S + TRV D G S RL + V ++ + R
Sbjct: 81 GTDDVSMPSPAVLSTTTRVPDRPKENGRSTSIGNFGRLKAQKVKVLARRSAHLKREDSGR 140
Query: 190 IKSALHDMETPNDELFDFRGARAQRGRPLSSALEDDEFNEDITESLKRLRASKKTSRFAD 369
I ++ E+P+DE D G +R R ++ ++ +D T L + + R AD
Sbjct: 141 ISTSRFS-ESPSDES-DEDGTYFERDRARNTR-QNSRSRDDKTRGAHSLNSVLRQYRGAD 197
Query: 370 DIDFENS 390
D+DF S
Sbjct: 198 DLDFPGS 204
>11_06_0211 +
21305535-21305895,21306512-21306761,21307543-21307652,
21308836-21309067,21310233-21310603,21311434-21311507,
21311727-21311880,21312251-21312434,21313066-21313291,
21313704-21314135,21314399-21314456,21314748-21314829,
21315350-21315421,21316594-21316737,21317379-21317457,
21318023-21318105,21318198-21318252,21318488-21318778
Length = 1085
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 205 HDMETPNDELFDFRGARAQRGR-PLSSALEDDEFNEDITESLKRLRA-SKKTSRFADDID 378
HD +T + +LF + +RGR S L + F E + + + L A S+ S A +D
Sbjct: 638 HDSDTIDGDLFILKRIMVERGRAAYLSGLREKYFGELFSNASRTLEALSRAESSTAFSVD 697
Query: 379 FE-NSVTNLENRMRISDKILESV 444
+ N EN M +++ L+ +
Sbjct: 698 SQLNPHIFAENNMSFTEEPLKHI 720
>04_04_1023 +
30201374-30201487,30201601-30202285,30202402-30202506,
30202561-30203939
Length = 760
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +1
Query: 205 HDMETPNDELFDFRGARAQRGRPLSSALEDDEFNEDITESLKRLRAS--KKTSRFADDID 378
HD ET E G A S E DEFN DI +++ + S +D+
Sbjct: 579 HDTETNAAENAQEEGVVASEDLLQISETEQDEFNSDICHAVEHNERDNVESVSSEREDVS 638
Query: 379 FENSVT 396
EN+ T
Sbjct: 639 MENAFT 644
>01_05_0080 -
17957276-17957676,17957810-17957921,17958001-17958126,
17958199-17958331,17960069-17960193,17960314-17960409,
17960430-17960621,17960694-17960800,17961318-17961426,
17961538-17961624,17963017-17963103,17964254-17964379
Length = 566
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +1
Query: 274 LSSALEDD---EFNEDITESLKRLRASKKTSRFADDIDFENSVTNLE 405
+S+AL D E + E++K +R +K+T ADD+D S+ N+E
Sbjct: 25 VSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADDVDSALSLRNVE 71
>10_08_0263 -
16311650-16311675,16312101-16312149,16312987-16313167,
16313900-16314722,16314749-16314818
Length = 382
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 22 KAXMSRVGRTRRTRVYDCNYNKGESYY-RPVLDRLDGKAPIVREPERESIRADVDNRIKS 198
K + R GR + R+Y+ + GE YY R +L+ G + ++ V + KS
Sbjct: 110 KKWVRRKGRKKIGRIYNAHPASGERYYLRVILNTAKGCTTF---EDIRTVNGFVHSSYKS 166
Query: 199 ALHDMETPNDE 231
A H + ND+
Sbjct: 167 ACHALGFLNDD 177
>07_03_0562 +
19535801-19535865,19535972-19536017,19536125-19536223,
19536588-19536674,19537545-19537613,19537702-19538710,
19539217-19539365,19539453-19540487,19540488-19541003
Length = 1024
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 223 NDELFDFRGARAQRGRPLSSALEDD-EFNEDITESLKRLRASKKTSRFADDIDFENSVTN 399
+D+ F + Q RP S LEDD +F + + +++ R +S F + ++SV N
Sbjct: 172 SDDDLGFMSHKEQVSRPNSKDLEDDRKFKDQVKKTISRNSEDVLSSSFQKERVKKSSVRN 231
Query: 400 LENRMRIS 423
++ + S
Sbjct: 232 SDDDLSSS 239
>02_05_0332 - 28008205-28008520,28008630-28008841
Length = 175
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +1
Query: 250 ARAQRGRPLSSALEDDEFNEDITESLKRLRASKKTSRFADDIDFENSVTNLENRMRISD 426
A +RG ++++ T + R+S +S ADD +S ++ E R +SD
Sbjct: 5 AWCRRGGAADCEEQEEDIGSPSTSAGSSARSSGSSSELADDASSSSSSSSAERRFEMSD 63
>09_06_0040 -
20432008-20432091,20432152-20432229,20432322-20432941,
20433042-20433108,20433276-20433291,20433781-20433887,
20433989-20434037,20435059-20435142,20435288-20435384,
20435914-20435985,20436075-20436435,20437864-20438259
Length = 676
Score = 27.9 bits (59), Expect = 5.1
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +1
Query: 133 APIVREPERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRGRPLSSALEDDEFNE- 309
A I R+ + ++ R++ ++ EL R + R LSS+LED F +
Sbjct: 107 ADIERQEAAARLASEEVRRLERRRDEITESQRELLQAREMIDEAQRSLSSSLEDQSFGDV 166
Query: 310 ---DITESLKRLRASK 348
DI E +RL + K
Sbjct: 167 PSGDIDEDSERLESVK 182
>10_08_0459 +
18092656-18092724,18092827-18092886,18092970-18093038,
18093134-18093178,18093706-18094332,18094424-18094597,
18094688-18094991,18095070-18095161,18095253-18095319,
18095407-18095478,18095613-18095830,18095979-18096113,
18096225-18096520,18096603-18096774,18096860-18096958,
18097048-18097179,18097273-18097373,18097460-18097649,
18097713-18097751
Length = 986
Score = 27.5 bits (58), Expect = 6.8
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +1
Query: 46 RTRRTRVYDCNYNKGESYYRPVLDRL 123
+ R + DC Y++G+ +Y P++ +L
Sbjct: 852 KDRMLVILDCVYHEGDDFYEPIMTQL 877
>12_02_0908 - 24214221-24215933
Length = 570
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -1
Query: 399 IGDAVLKVDVVSEPRSLFARAQAFQRFCDVFVKFIVFQGRRERSAALGACTSE 241
+GD + V R + A Q+ Q+ D FV +V RR R AA A +
Sbjct: 275 VGDFFPALRWVDRLRGVVATLQSLQKRRDAFVAGLVDDHRRTRRAAAAAADKD 327
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 452 PIPTLSSILSEILIRFSRLVTLFSK 378
P+PT SSIL +L F+RL L K
Sbjct: 272 PVPTNSSILDSVLEGFARLQNLNGK 296
>06_01_0210 -
1596578-1596868,1598550-1598828,1600503-1600511,
1600713-1600781
Length = 215
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 396 GDAVLKVDVVSEPRSLFARAQAFQR 322
G+ +KVDVV + R LFA+ +A +R
Sbjct: 33 GEGGVKVDVVEKLRGLFAKGEAKRR 57
>01_06_0880 +
32687018-32687060,32687142-32687219,32687323-32687532,
32687868-32689744
Length = 735
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = +1
Query: 274 LSSALEDDEFNEDITESLKRLRASKKTSRFADDIDFENSVTNLENRM 414
+S +ED N+D + +++++ KT+ +++I+ NS + L+ M
Sbjct: 133 VSITIEDTTSNKDSSTLVEKIKLVHKTTERSEEINIGNSQSLLKENM 179
>01_05_0077 +
17928962-17929392,17929472-17929568,17929700-17929747,
17929833-17929996,17930454-17930469
Length = 251
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 115 DRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELFD 240
D+++ K P + + E ADVDN I+S E ++LFD
Sbjct: 196 DKVEIKVPFIADDEDIEEMADVDNNIESD----EEEEEDLFD 233
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.130 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,070,152
Number of Sequences: 37544
Number of extensions: 213295
Number of successful extensions: 538
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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