Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31833
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    30   0.053
AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      23   4.6  
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    23   6.1  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 29.9 bits (64), Expect = 0.053
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +1

Query: 307 EDITESLKRLRASKKTSRFADDIDFENSVTNLENRMRISDKILES 441
           E ITE LK +   KKT R  +    E+ +  LENR++ S   LE+
Sbjct: 692 EKITEELKEVM--KKTRRQGELTTVESQIRGLENRLKYSMNDLET 734


>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = -1

Query: 426 VRNPHSVFEIGDAVLKVDVVSEPRSLFARAQAFQRFCDVFVKFIVFQGRRERSAALGACT 247
           V+ PH       A+ ++    +   L  R   FQR      +       R +SAA+GA  
Sbjct: 36  VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-LRFQSAAIGALQ 94

Query: 246 SEVEQFIVGCF 214
              E ++VG F
Sbjct: 95  EASEAYLVGLF 105


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 441 AFEYFVRNPHSVFEI 397
           A EYFV N H V+ +
Sbjct: 89  ALEYFVENGHEVYAV 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.130    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 457,108
Number of Sequences: 2352
Number of extensions: 7814
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)