Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31833
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   3.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   3.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   4.3  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    21   7.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   10.0 
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   10.0 
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   10.0 
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   10.0 

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 376 DFENSVTNLENRMRISDKILESV 444
           DF NS+   EN++  SD + E +
Sbjct: 545 DFWNSINFNENKLHTSDTLKEEL 567


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 376 DFENSVTNLENRMRISDKILESV 444
           DF NS+   EN++  SD + E +
Sbjct: 545 DFWNSINFNENKLHTSDTLKEEL 567


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +1

Query: 148 EPERESIRADVDNRIKSALHDMETPNDEL 234
           EPE E  +  V        H  E PNDE+
Sbjct: 297 EPEIEISQNSVSTGSDKENHKTEEPNDEV 325


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 4   LQGTENKAXMSRVGRTRRTRVYDCNYNKGESY 99
           +QGT+       +    + RVYD N   G++Y
Sbjct: 44  IQGTKEGKSRPSLDIDYKQRVYDKNGMTGDAY 75


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 289 EDDEFNEDITESLKRL 336
           EDD FN    +S KR+
Sbjct: 65  EDDSFNNQADKSEKRI 80


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 502 VLRYPAEHVWR 470
           +L  P++H+WR
Sbjct: 102 MLHVPSDHIWR 112


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 502 VLRYPAEHVWR 470
           +L  P++H+WR
Sbjct: 102 MLHVPSDHIWR 112


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 502 VLRYPAEHVWR 470
           +L  P++H+WR
Sbjct: 98  MLHVPSDHIWR 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.130    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,693
Number of Sequences: 438
Number of extensions: 2264
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)