Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31831
         (512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.4  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   8.5  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 192 SIFERNYFHLHLKSLQ 145
           S++ER Y + HL  +Q
Sbjct: 50  SVYERRYMNAHLSGIQ 65


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -3

Query: 447 VYTIYCRALLKNMNIYFCMNF 385
           +Y  +C  ++  M++ FC  F
Sbjct: 166 IYHFFCAFIIFTMHLLFCCAF 186



 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -3

Query: 447 VYTIYCRALLKNMNIYFCMNF 385
           +Y  YC  ++     YFC  F
Sbjct: 285 IYYFYCALIILLCIYYFCRAF 305


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +1

Query: 406 IHIFKQCSTVDRIDLYRLGL 465
           +H+ KQC  + +I++ + G+
Sbjct: 111 LHVVKQCYHLQKINVQQSGI 130


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 287 ILCVYIYLTHSANAKYSFRY 228
           ILC ++    +A  KY+ +Y
Sbjct: 8   ILCAFLVAVSAAENKYTNKY 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,507
Number of Sequences: 336
Number of extensions: 2182
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)