Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31830
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040640-1|AAD34652.1|  602|Caenorhabditis elegans Hypothetical ...    30   1.1  
AL132848-1|CAB60388.2|  381|Caenorhabditis elegans Hypothetical ...    29   1.5  
Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z70686-9|CAA94614.3|  915|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical ...    27   8.0  

>AF040640-1|AAD34652.1|  602|Caenorhabditis elegans Hypothetical
           protein F09D1.1 protein.
          Length = 602

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 296 VHYYDCIFKDYFINHKFRTLD 234
           V +YDC+ KD   NHK+ T D
Sbjct: 509 VDFYDCLAKDARANHKYTTYD 529


>AL132848-1|CAB60388.2|  381|Caenorhabditis elegans Hypothetical
           protein Y47H10A.2 protein.
          Length = 381

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
 Frame = +1

Query: 94  KKHYTHYHVFDAHTHAYYLFIVKLFLLHKVYGQIEN--RLNIFCLC 225
           K  +    V   H HA+    +K F+LH + G + N  R    C C
Sbjct: 260 KNIFRFCEVIHLHIHAFTAKCIKQFILHWLAGHVPNLRRFRFVCFC 305


>Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical
           protein T01E8.5 protein.
          Length = 1270

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 214 KYLIYSQFDHRLYAIRKV*Q*TNSMHACVRQIHG 113
           KYL Y Q+D  +Y  +K+    N+   C+RQ+ G
Sbjct: 456 KYLDYIQYDSNVYNYKKL---KNAFEDCIRQVTG 486


>Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical
           protein T01E8.5 protein.
          Length = 1270

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 214 KYLIYSQFDHRLYAIRKV*Q*TNSMHACVRQIHG 113
           KYL Y Q+D  +Y  +K+    N+   C+RQ+ G
Sbjct: 456 KYLDYIQYDSNVYNYKKL---KNAFEDCIRQVTG 486


>Z70686-9|CAA94614.3|  915|Caenorhabditis elegans Hypothetical
           protein R10H10.7 protein.
          Length = 915

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 97  KHYTHYHVFDAHTHAYYLFIVKLFLLHKVYGQIENRLNIF--CLC*YLSKVRNL 252
           K  TH    D  T    L +V + L  K  G+I NR N+   CLC  +++  +L
Sbjct: 542 KPLTHGTELDWSTCIESLSLVNVTLCMKFIGEIANRSNVSVNCLCTIINQTNSL 595


>AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical
           protein F02E11.2 protein.
          Length = 514

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 134 VCASNTW*CV*CFFYGFNVFFRHNLKKN*QTTP 36
           V ++NT+    CFF+GF  FF +   +N Q  P
Sbjct: 83  VVSTNTFLLFLCFFFGFFGFFSNFKNENFQRLP 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,106,337
Number of Sequences: 27780
Number of extensions: 200396
Number of successful extensions: 364
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)