Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31826
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein. 31 3.2
BC112226-1|AAI12227.2| 637|Homo sapiens R3H domain containing 2... 30 5.5
BC104995-1|AAI04996.2| 637|Homo sapiens R3H domain containing 2... 30 5.5
BC041857-1|AAH41857.1| 681|Homo sapiens R3HDM2 protein protein. 30 5.5
AB023219-1|BAA76846.2| 962|Homo sapiens KIAA1002 protein protein. 30 5.5
BC096288-1|AAH96288.1| 436|Homo sapiens glial cells missing hom... 29 9.7
AL512347-2|CAI14905.1| 436|Homo sapiens glial cells missing hom... 29 9.7
AB047819-1|BAB18039.1| 436|Homo sapiens chorion-specific transc... 29 9.7
AB041714-1|BAA94757.1| 436|Homo sapiens chorion-specific transc... 29 9.7
AB026493-1|BAA77250.2| 436|Homo sapiens GCM motif protein protein. 29 9.7
>AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein.
Length = 2414
Score = 30.7 bits (66), Expect = 3.2
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Frame = -1
Query: 372 PFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVL-PQYFKQPNMFFKKVLVY-- 202
P LF F + + P +S F S + P+ P+L P F+ P + + +++
Sbjct: 1151 PVSLFSFQHLVQHEPGQSPEFFSTQAMSSLLSSPYSMPLLPPSLFQAPPLPLQPTVLHPG 1210
Query: 201 --HEGELFPYLFNIPHYTP 151
H +L P+ NIP P
Sbjct: 1211 QLHLPQLMPHPANIPFRQP 1229
>BC112226-1|AAI12227.2| 637|Homo sapiens R3H domain containing 2
protein.
Length = 637
Score = 29.9 bits (64), Expect = 5.5
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -1
Query: 450 IPTDMFN-SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGY 274
+PT ++ SS P++ +LP Y P Q+ V YP P ++ ++ P + P Y
Sbjct: 147 LPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYR---PLSHPVAY 203
Query: 273 -PFDRPVLPQYFKQPNM 226
P LPQ +QP +
Sbjct: 204 SPQRGQQLPQPSQQPGL 220
>BC104995-1|AAI04996.2| 637|Homo sapiens R3H domain containing 2
protein.
Length = 637
Score = 29.9 bits (64), Expect = 5.5
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -1
Query: 450 IPTDMFN-SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGY 274
+PT ++ SS P++ +LP Y P Q+ V YP P ++ ++ P + P Y
Sbjct: 147 LPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYR---PLSHPVAY 203
Query: 273 -PFDRPVLPQYFKQPNM 226
P LPQ +QP +
Sbjct: 204 SPQRGQQLPQPSQQPGL 220
>BC041857-1|AAH41857.1| 681|Homo sapiens R3HDM2 protein protein.
Length = 681
Score = 29.9 bits (64), Expect = 5.5
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -1
Query: 450 IPTDMFN-SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGY 274
+PT ++ SS P++ +LP Y P Q+ V YP P ++ ++ P + P Y
Sbjct: 191 LPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYR---PLSHPVAY 247
Query: 273 -PFDRPVLPQYFKQPNM 226
P LPQ +QP +
Sbjct: 248 SPQRGQQLPQPSQQPGL 264
>AB023219-1|BAA76846.2| 962|Homo sapiens KIAA1002 protein protein.
Length = 962
Score = 29.9 bits (64), Expect = 5.5
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -1
Query: 450 IPTDMFN-SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGY 274
+PT ++ SS P++ +LP Y P Q+ V YP P ++ ++ P + P Y
Sbjct: 472 LPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYR---PLSHPVAY 528
Query: 273 -PFDRPVLPQYFKQPNM 226
P LPQ +QP +
Sbjct: 529 SPQRGQQLPQPSQQPGL 545
>BC096288-1|AAH96288.1| 436|Homo sapiens glial cells missing
homolog 1 (Drosophila) protein.
Length = 436
Score = 29.1 bits (62), Expect = 9.7
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Frame = -1
Query: 429 SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLP 250
S + R L Y +PF L + + P+ SEPF +P P P+ P
Sbjct: 298 SKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWP 357
Query: 249 Q-----YFKQPNMFFKKVL---VYHEGELFPYLF 172
Y ++ ++ F + YH + P+LF
Sbjct: 358 NPAGNLYEEKVHVDFNSYVQSPAYHSPQEDPFLF 391
>AL512347-2|CAI14905.1| 436|Homo sapiens glial cells missing
homolog 1 (Drosophila) protein.
Length = 436
Score = 29.1 bits (62), Expect = 9.7
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Frame = -1
Query: 429 SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLP 250
S + R L Y +PF L + + P+ SEPF +P P P+ P
Sbjct: 298 SKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWP 357
Query: 249 Q-----YFKQPNMFFKKVL---VYHEGELFPYLF 172
Y ++ ++ F + YH + P+LF
Sbjct: 358 NPAGNLYEEKVHVDFNSYVQSPAYHSPQEDPFLF 391
>AB047819-1|BAB18039.1| 436|Homo sapiens chorion-specific
transcription factor GCMa protein.
Length = 436
Score = 29.1 bits (62), Expect = 9.7
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Frame = -1
Query: 429 SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLP 250
S + R L Y +PF L + + P+ SEPF +P P P+ P
Sbjct: 298 SKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWP 357
Query: 249 Q-----YFKQPNMFFKKVL---VYHEGELFPYLF 172
Y ++ ++ F + YH + P+LF
Sbjct: 358 NPAGNLYEEKVHVDFNSYVQSPAYHSPQEDPFLF 391
>AB041714-1|BAA94757.1| 436|Homo sapiens chorion-specific
transcription factor GCMa protein.
Length = 436
Score = 29.1 bits (62), Expect = 9.7
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Frame = -1
Query: 429 SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLP 250
S + R L Y +PF L + + P+ SEPF +P P P+ P
Sbjct: 298 SKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWP 357
Query: 249 Q-----YFKQPNMFFKKVL---VYHEGELFPYLF 172
Y ++ ++ F + YH + P+LF
Sbjct: 358 NPAGNLYEEKVHVDFNSYVQSPAYHSPQEDPFLF 391
>AB026493-1|BAA77250.2| 436|Homo sapiens GCM motif protein protein.
Length = 436
Score = 29.1 bits (62), Expect = 9.7
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Frame = -1
Query: 429 SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLP 250
S + R L Y +PF L + + P+ SEPF +P P P+ P
Sbjct: 298 SKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWP 357
Query: 249 Q-----YFKQPNMFFKKVL---VYHEGELFPYLF 172
Y ++ ++ F + YH + P+LF
Sbjct: 358 NPAGNLYEEKVHVDFNSYVQSPAYHSPQEDPFLF 391
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,113,247
Number of Sequences: 237096
Number of extensions: 1478309
Number of successful extensions: 3293
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3293
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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