Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31826
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g02190.2 68414.m00150 CER1 protein, putative similar to CER1 ... 31 0.46
At1g02190.1 68414.m00149 CER1 protein, putative similar to CER1 ... 31 0.46
At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical ... 31 0.61
At3g03480.1 68416.m00346 transferase family protein similar to h... 31 0.61
At1g10760.1 68414.m01231 starch excess protein (SEX1) identical ... 29 1.9
At4g13390.1 68417.m02092 proline-rich extensin-like family prote... 29 2.5
At5g14580.1 68418.m01710 polyribonucleotide nucleotidyltransfera... 28 3.2
At5g06630.1 68418.m00749 proline-rich extensin-like family prote... 28 3.2
At4g18030.1 68417.m02684 dehydration-responsive family protein s... 28 4.3
At3g28550.1 68416.m03565 proline-rich extensin-like family prote... 28 4.3
At3g07980.1 68416.m00975 protein kinase, putative similar to MAP... 28 4.3
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 28 4.3
At3g47770.1 68416.m05204 ABC transporter family protein AbcA, Di... 27 7.5
At5g54350.1 68418.m06768 expressed protein ; expression support... 27 9.9
At5g10350.1 68418.m01200 polyadenylate-binding protein family pr... 27 9.9
At5g09410.1 68418.m01090 calmodulin-binding protein similar to a... 27 9.9
At3g54590.1 68416.m06040 proline-rich extensin-like family prote... 27 9.9
At3g54580.1 68416.m06039 proline-rich extensin-like family prote... 27 9.9
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 27 9.9
At2g24980.1 68415.m02987 proline-rich extensin-like family prote... 27 9.9
>At1g02190.2 68414.m00150 CER1 protein, putative similar to CER1
GI:1199467 and maize gl1 homolog (glossy1 locus)
GI:1209703 from [Arabidopsis thaliana]
Length = 623
Score = 31.1 bits (67), Expect = 0.46
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2
Query: 290 TNHSVIHSIAPFFLSTSNNLTCS-SRRSWSTMKENYSPIYLTFLTIH 153
TN+S+ I F T++NLT S RS +E+ I+LT LT H
Sbjct: 257 TNYSLFMPIYDFIYGTTDNLTDSLYERSLEIEEESPDVIHLTHLTTH 303
>At1g02190.1 68414.m00149 CER1 protein, putative similar to CER1
GI:1199467 and maize gl1 homolog (glossy1 locus)
GI:1209703 from [Arabidopsis thaliana]
Length = 627
Score = 31.1 bits (67), Expect = 0.46
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2
Query: 290 TNHSVIHSIAPFFLSTSNNLTCS-SRRSWSTMKENYSPIYLTFLTIH 153
TN+S+ I F T++NLT S RS +E+ I+LT LT H
Sbjct: 257 TNYSLFMPIYDFIYGTTDNLTDSLYERSLEIEEESPDVIHLTHLTTH 303
>At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical to
MAP3K epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1368
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 320 DSLGVGSYG*TNTNSWKGNPSYVPLGSISLEGIVSEELN 436
D +G G+YG N +V + +SLE IV E+LN
Sbjct: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIVQEDLN 62
>At3g03480.1 68416.m00346 transferase family protein similar to
hypersensitivity-related gene GB:CAA64636 [Nicotiana
tabacum]; contains Pfam transferase family domain
PF00248
Length = 454
Score = 30.7 bits (66), Expect = 0.61
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = -1
Query: 417 MPSRLMLPKGTYDGFPFQLF----VFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLP 250
M ++ LP+ T G F++ V P +PTP+E +P S + D + G F PV+
Sbjct: 1 MDHQVSLPQSTTTGLSFKVHRQQRELVTPAKPTPRELKPL-SDIDDQQ--GLRFQIPVI- 56
Query: 249 QYFKQPNM 226
+F +PN+
Sbjct: 57 -FFYRPNL 63
>At1g10760.1 68414.m01231 starch excess protein (SEX1) identical to
SEX1 [Arabidopsis thaliana] GI:12044358; supporting cDNA
gi|12044357|gb|AF312027.1|AF312027
Length = 1399
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 299 TTDLNGSDSLGVGSYG*TNTNSWKGNPSYVPLGSISLEGIVSEELNMSV 445
T+DL G+ S +G Y SW G P+ V L E ++SE+ N +V
Sbjct: 1089 TSDLVGAKSRNIG-YLKGKVPSWVGIPTSVALPFGVFEKVISEKANQAV 1136
>At4g13390.1 68417.m02092 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 429
Score = 28.7 bits (61), Expect = 2.5
Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Frame = -1
Query: 447 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 268
P ++NS P P Y P +VY P P PF V + P Y +
Sbjct: 342 PPYVYNSPPPPPYYSPSPTVNYKSPPPP---YVYNSPPPPPYYSPFPKVEYKSPPPPYIY 398
Query: 267 DRPVLPQYFK-QPNMFFKKVLVYHEGELFPYLFNIPHY 157
+ P P Y+ P + +K PY++ P+Y
Sbjct: 399 NSPPPPPYYSPSPKITYKSPPP-------PYIYKTPYY 429
>At5g14580.1 68418.m01710 polyribonucleotide nucleotidyltransferase,
putative similar to Swiss-Prot:P05055 polyribonucleotide
nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide
phosphorylase) (PNPase) [Escherichia coli]
Length = 991
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 275 IHSIAPFFLSTSNNLTCSSRRSWSTMKENYS 183
+ S++P ST++NL S+ STMKEN S
Sbjct: 877 LKSVSPKNNSTASNLVSFSKAKKSTMKENLS 907
>At5g06630.1 68418.m00749 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 440
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -1
Query: 354 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 217
+VY P P S P V + P Y + P P Y PN+++K
Sbjct: 308 YVYSSPPPPYYS-PSPKVYYKSPPPPYVYSSPPPPYYSPSPNVYYK 352
>At4g18030.1 68417.m02684 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 621
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = -1
Query: 351 VYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGE 190
+Y P ++E + +VP K + PF P Y N FK + V G+
Sbjct: 113 IYRERHCPPDNEKLRCLVPAPKGYMTPFPWPKSRDYVHYANAPFKSLTVEKAGQ 166
>At3g28550.1 68416.m03565 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1018
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -1
Query: 354 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 217
+VY P P S P VV + P Y + P P Y P +++K
Sbjct: 567 YVYSSPPPPYYS-PSPKVVYKSPPPPYVYSSPPPPYYSPSPKVYYK 611
>At3g07980.1 68416.m00975 protein kinase, putative similar to MAP3K
epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1367
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 320 DSLGVGSYG*TNTNSWKGNPSYVPLGSISLEGIVSEELN 436
D +G G+YG N +V + +SLE I E+LN
Sbjct: 24 DEIGKGAYGRVYIGLDLENGDFVAIKQVSLENIGQEDLN 62
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/77 (28%), Positives = 27/77 (35%)
Frame = -1
Query: 447 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 268
P SS P PK TY P +VY P P P V + P Y +
Sbjct: 710 PPPYVYSSPPPPYYSPSPKPTYKSPPPP---YVYSSPPPPPYYSPSPKVEYKSPPPPYVY 766
Query: 267 DRPVLPQYFKQPNMFFK 217
P P Y P + +K
Sbjct: 767 SSPPPPYYSPSPKVEYK 783
Score = 27.5 bits (58), Expect = 5.7
Identities = 30/102 (29%), Positives = 38/102 (37%), Gaps = 3/102 (2%)
Frame = -1
Query: 447 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 268
P SS P PK TY P +VY P P S P VV + P Y +
Sbjct: 433 PPPYVYSSPPPPYYSPSPKLTYKSSPPP---YVYSSPPPPYYS-PSPKVVYKSPPPPYVY 488
Query: 267 DRPVLPQYFKQPNMFFKKVLVYHEGELFPYLFNI---PHYTP 151
P P Y P +K PY++N P+Y+P
Sbjct: 489 SSPPPPYYSPSPKPSYKSPPP-------PYVYNSPPPPYYSP 523
>At3g47770.1 68416.m05204 ABC transporter family protein AbcA,
Dictyostelium discoideum, U66526
Length = 900
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = -2
Query: 266 IAPFFLSTSN-----NLTCSSRRSWSTMKENYSPIYLTFLTIHQIKRNYNALISKSKRTQ 102
+A FL+ +N NLT R WS ++ P+YL + + I+ +++L++ S Q
Sbjct: 5 VAASFLTQANALFKKNLTYQKRNIWSNVRLIVIPLYLCVVLV-CIQAVFDSLVNNSVDNQ 63
Query: 101 TIC 93
C
Sbjct: 64 CGC 66
>At5g54350.1 68418.m06768 expressed protein ; expression supported
by MPSS
Length = 279
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 293 SGTTDLNGSDSLGVGSYG*TNTNSWKG-NPSY 385
S T D+N +LG S+ TN +SW +PS+
Sbjct: 114 SSTNDINLDLTLGPSSWSNTNPSSWSNTDPSF 145
>At5g10350.1 68418.m01200 polyadenylate-binding protein family
protein / PABP family protein contains weak similarity
to poly(A) binding protein II from [Mus musculus]
GI:2351846, [Xenopus laevis] GI:11527140; contains
InterPro entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 217
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = -1
Query: 291 NKPFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGELFPY 178
N GY F RP +P YF P + K PY
Sbjct: 179 NPSMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPY 216
>At5g09410.1 68418.m01090 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from [Nicotiana tabacum]
Length = 1007
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -2
Query: 260 PFFLSTSNNLTCSSRR-----SWSTMKENYSPIYLTFLTIHQIKRNYNALIS 120
PF+++ SN CS R S ST K N + +Y T+ ++ + +++
Sbjct: 479 PFYVTCSNRFACSEVREFDFLSGSTQKINATDVYGTYTNEASLQLRFEKMLA 530
>At3g54590.1 68416.m06040 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 743
Score = 26.6 bits (56), Expect = 9.9
Identities = 23/83 (27%), Positives = 31/83 (37%)
Frame = -1
Query: 465 LDQGKIPTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNK 286
+D P SS P+ PK Y P +VY P P S P V +
Sbjct: 341 VDYKSPPPPYVYSSPPPPTYSPSPKVDYKSPPPP---YVYSSPPPPYYS-PSPKVEYKSP 396
Query: 285 PFGYPFDRPVLPQYFKQPNMFFK 217
P Y + P P Y P +++K
Sbjct: 397 PPPYVYSSPPPPTYSPSPKVYYK 419
>At3g54580.1 68416.m06039 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 951
Score = 26.6 bits (56), Expect = 9.9
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = -1
Query: 447 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 268
P SS P+ PK Y P +VY P P S P V + P Y +
Sbjct: 447 PPPYVYSSPPPPTYSPSPKVDYKSPPPP---YVYSSPPPPYYS-PSPKVYYKSPPPPYVY 502
Query: 267 DRPVLPQYFKQPNMFFK 217
P P Y P +++K
Sbjct: 503 SSPPPPYYSPSPKVYYK 519
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -1
Query: 351 VYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 217
VY P P P V + P Y + P P Y P +++K
Sbjct: 541 VYYKSPPPPYYSPSPKVYYKSPPPPYVYSSPPPPYYSPSPKVYYK 585
Score = 26.6 bits (56), Expect = 9.9
Identities = 23/77 (29%), Positives = 28/77 (36%)
Frame = -1
Query: 447 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 268
P SS P PK Y P V V P P P P VV + P Y +
Sbjct: 663 PPPYVYSSPPPPYYSPSPKVYYKSPPHP-HVCVCP--PPPPCYSPSPKVVYKSPPPPYVY 719
Query: 267 DRPVLPQYFKQPNMFFK 217
P P Y P +++K
Sbjct: 720 SSPPPPHYSPSPKVYYK 736
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -1
Query: 354 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQP 232
+VYP P P S P P P+ YP P P Y P
Sbjct: 408 YVYPSPPPPPPSPPPYVYPPPPPPYVYP--PPPSPPYVYPP 446
>At2g24980.1 68415.m02987 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 559
Score = 26.6 bits (56), Expect = 9.9
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = -1
Query: 354 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGELFPYL 175
+VY P P S P V + P Y + P P Y P VY++ PY+
Sbjct: 352 YVYSSPPPPYYS-PSPKVYYKSPPPPYVYSSPPPPYYSPSPK-------VYYKSPPPPYV 403
Query: 174 FNI---PHYTP 151
+N P+Y+P
Sbjct: 404 YNSPPPPYYSP 414
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -1
Query: 354 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 217
+VY P P S P V + P Y + P P Y P +++K
Sbjct: 452 YVYSSPPPPYYS-PSPKVYYKSPPPSYVYSSPPPPYYSPSPKVYYK 496
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -1
Query: 354 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 217
+VY P P S P V + P Y + P P Y P +++K
Sbjct: 477 YVYSSPPPPYYS-PSPKVYYKSPPPSYVYSSPPPPYYSPSPKVYYK 521
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,182,621
Number of Sequences: 28952
Number of extensions: 217217
Number of successful extensions: 820
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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