Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31814
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.1  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   2.8  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   2.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   4.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   4.9  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.5  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 255 HTTHLMVSGYRRPWTSAMPGAESS 326
           +T H+   G+  P+T  M G E S
Sbjct: 486 YTIHMGYHGFHNPFTCNMCGVECS 509


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -2

Query: 398 AMTCSPSINEASGEYLTSAMPGAAA 324
           +M CSP         L S MPG  A
Sbjct: 39  SMNCSPQGASFGSSMLNSGMPGGMA 63


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 264 GSYARQYARTRKNKLSAYAAIY 199
           GSY R +A       S YAA Y
Sbjct: 263 GSYGRGFALADPTNTSLYAATY 284


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 264 GSYARQYARTRKNKLSAYAAIY 199
           GSY R +A       S YAA Y
Sbjct: 263 GSYGRGFALADPTNTSLYAATY 284


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 276 SGYRRPWTSAMPGAESS 326
           +G+R P+ SA+P + SS
Sbjct: 200 AGFRSPYPSALPISTSS 216


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 276 SGYRRPWTSAMPGAESS 326
           +G+R P+ SA+P + SS
Sbjct: 92  AGFRSPYPSALPISTSS 108


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 138 MKCRSPSQAAARLISESIDDYISRH 212
           +K   P     RL   S ++Y++RH
Sbjct: 232 VKVFRPEPLCERLFEASREEYVTRH 256


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 285 GNHSPSSGSYARQYARTRKNKLSAY 211
           G  +  +G Y R+Y    KN  S Y
Sbjct: 432 GRKADPNGDYIRKYLPVLKNMPSQY 456


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,009
Number of Sequences: 336
Number of extensions: 2126
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)