Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31814
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0413 + 17372852-17373787                                         29   2.2  
06_03_0259 - 18851809-18852561,18852659-18852895                       29   2.9  
01_07_0336 - 42833205-42834926                                         29   2.9  
03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171     28   3.9  
10_08_1043 + 22524322-22524346,22524931-22525028,22525287-225253...    27   6.8  
10_02_0085 - 5093036-5094285,5094737-5095255,5098698-5099373           27   8.9  
01_07_0010 + 40429613-40429677,40429702-40430015,40432150-40434386     27   8.9  

>09_04_0413 + 17372852-17373787
          Length = 311

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 354 ILSRSLVNRRRTSHSPRVTVPARADPAKRTPCL 452
           + S+ +V    T  S RV +PAR DP+K+ P L
Sbjct: 43  VTSKDVVVDADTGLSVRVFLPARPDPSKKLPVL 75


>06_03_0259 - 18851809-18852561,18852659-18852895
          Length = 329

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
 Frame = -1

Query: 330 SGLTLPLALLKSMGDGNHSP-----SSGSYARQYARTRKNKLSAYAAIYSHR 190
           + L+L LA+L S G+G+H P     +    A+ Y +T  N  +A   +  HR
Sbjct: 10  ASLSLLLAVLASTGEGSHQPVVMPVAMELSAKYYRKTCPNVQNAVRTVMEHR 61


>01_07_0336 - 42833205-42834926
          Length = 573

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 303 LKSMGDGNHSPSSGSYARQYARTRKNKLSA-YAAIYSH 193
           L+ M D  HS   G+Y    A  +K  L+A YA++ +H
Sbjct: 87  LRDMNDAGHSIDQGTYLAALASFKKASLTADYASLTAH 124


>03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171
          Length = 1054

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
 Frame = +3

Query: 54  YSYSELCVVNE*LN-QNKIMQELTSQVVAMKCRSPSQAAARLISESIDDYISRHKRTVYF 230
           Y   ELCVV E      K+  E TS+++ M C  PS+    +I   +         T   
Sbjct: 526 YVPMELCVVCEGQKFLGKLSDEQTSKILKMGCERPSERKG-IIKGVVKGAFHARSDTYAD 584

Query: 231 FLSLHTDEHTTHL 269
             SL   +H T L
Sbjct: 585 QFSLQVSKHMTKL 597


>10_08_1043 +
           22524322-22524346,22524931-22525028,22525287-22525384,
           22525878-22525935,22526642-22526743,22526840-22526901,
           22527441-22527519,22527669-22527788,22527869-22527982,
           22528749-22528883
          Length = 296

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 260 DPLDGEWLPSPMDFS 304
           DPL GEW P+P D S
Sbjct: 166 DPLTGEWHPAPFDAS 180


>10_02_0085 - 5093036-5094285,5094737-5095255,5098698-5099373
          Length = 814

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -2

Query: 299 SPWATVTTHHQVGRMLVSMQGQEKINCPLMPRYIVIDTLGYQPSRC 162
           S +A V+T+    R++ +MQG     C  +P Y   D   Y P  C
Sbjct: 355 STYACVSTNSSCSRVISTMQGYVGYRCTCLPGY---DGNPYIPDGC 397


>01_07_0010 + 40429613-40429677,40429702-40430015,40432150-40434386
          Length = 871

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = -1

Query: 165 LPARAICISLPPLGMLILALSYFDLTIRSQHRVHYKNILHGGLDIHISN 19
           L A+ +  SL  +  +I AL   D+ IR+Q ++  +N L+G LDI  S+
Sbjct: 159 LKAKTLFDSLEGIDNMISAL---DIHIRAQTKIEGENDLYGILDISASD 204


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,375,267
Number of Sequences: 37544
Number of extensions: 261637
Number of successful extensions: 721
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)