Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31814
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113356-1|AAM29361.1|  347|Drosophila melanogaster GM13546p pro...    32   0.53 
AE013599-3824|AAF47170.1|  347|Drosophila melanogaster CG3260-PA...    32   0.53 
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm...    28   6.5  
AY129446-1|AAM76188.1| 1009|Drosophila melanogaster LD20608p pro...    28   6.5  
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P...    28   6.5  

>AY113356-1|AAM29361.1|  347|Drosophila melanogaster GM13546p
           protein.
          Length = 347

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 120 TSQVVAMKCRSPSQAAARLISESIDDYISRHKRTVYFFLSLHTD 251
           TSQ+   KCR+P    A+L +   D+Y     R++Y FL  ++D
Sbjct: 41  TSQLQCSKCRAPKSFLAQLYAPFEDEY--NFHRSIYVFLCRNSD 82


>AE013599-3824|AAF47170.1|  347|Drosophila melanogaster CG3260-PA
           protein.
          Length = 347

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 120 TSQVVAMKCRSPSQAAARLISESIDDYISRHKRTVYFFLSLHTD 251
           TSQ+   KCR+P    A+L +   D+Y     R++Y FL  ++D
Sbjct: 41  TSQLQCSKCRAPKSFLAQLYAPFEDEY--NFHRSIYVFLCRNSD 82


>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
            transmembrane protein protein.
          Length = 3004

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 251  RAYDPLDGEWLPSPMDFSNARGR-VKPLRLALLKLN 355
            R YDPL G+W+ SP D+     R + P RL L + N
Sbjct: 2593 RVYDPLIGQWM-SP-DWQRVAERIITPTRLHLYRFN 2626


>AY129446-1|AAM76188.1| 1009|Drosophila melanogaster LD20608p
           protein.
          Length = 1009

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 251 RAYDPLDGEWLPSPMDFSNARGR-VKPLRLALLKLN 355
           R YDPL G+W+ SP D+     R + P RL L + N
Sbjct: 598 RVYDPLIGQWM-SP-DWQRVAERIITPTRLHLYRFN 631


>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
            protein.
          Length = 3004

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 251  RAYDPLDGEWLPSPMDFSNARGR-VKPLRLALLKLN 355
            R YDPL G+W+ SP D+     R + P RL L + N
Sbjct: 2593 RVYDPLIGQWM-SP-DWQRVAERIITPTRLHLYRFN 2626


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,014,613
Number of Sequences: 53049
Number of extensions: 427736
Number of successful extensions: 1308
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)