Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31811
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 237 5e-64
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 126 1e-30
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 121 7e-29
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 110 1e-25
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 87 1e-18
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 79 3e-16
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 46 3e-06
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 45 6e-06
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 37 0.002
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 36 0.005
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.10
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.31
SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces pom... 29 0.55
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 28 0.72
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 28 0.72
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 27 1.7
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 27 1.7
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 2.2
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 2.2
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 27 2.2
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 26 2.9
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 26 2.9
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 26 3.8
SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr 1... 25 6.7
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 25 6.7
SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|ch... 25 8.9
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 8.9
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 237 bits (581), Expect = 5e-64
Identities = 110/144 (76%), Positives = 129/144 (89%)
Frame = +3
Query: 84 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 263
LT+EQIAEF+EAFSLFD+D DG IT+ ELG VMRSLGQ+PT AELQDMINEVDADGNGTI
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTI 65
Query: 264 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 443
DF EFLTMMARKMKDTD+EEE+REAF+VFDKDGNG+I+ EL HV+T+LGE+L+ EEV +
Sbjct: 66 DFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVAD 125
Query: 444 MIREADIDGDGQVNYEEFVTMMTS 515
MIREAD DGDG +NYEEF +++S
Sbjct: 126 MIREADTDGDGVINYEEFSRVISS 149
Score = 70.1 bits (164), Expect = 2e-13
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +3
Query: 72 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 251
M D EE++ +EAF +FDKDG+G IT +EL V+ SLG+ ++ E+ DMI E D DG
Sbjct: 78 MKDTDNEEEV---REAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDG 134
Query: 252 NGTIDFPEFLTMMARK 299
+G I++ EF +++ K
Sbjct: 135 DGVINYEEFSRVISSK 150
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 126 bits (305), Expect = 1e-30
Identities = 64/138 (46%), Positives = 91/138 (65%)
Frame = +3
Query: 87 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 266
++EQ E KEAF L+D D DG I T +G+V+RSLG N T+AEL + NE+ ID
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL----GDAID 59
Query: 267 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 446
+F++ ++ K+++T+SEEE +AFRVFDKD +G+I A+ M LGEKL+D EV M
Sbjct: 60 EKKFMSFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLM 119
Query: 447 IREADIDGDGQVNYEEFV 500
++EAD G +Y +FV
Sbjct: 120 VQEADPTNSGSFDYYDFV 137
Score = 52.4 bits (120), Expect = 4e-08
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +3
Query: 66 STMADQLTE-EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 242
S ++++L E E E+ +AF +FDKD G I T + M++LG+ ++ E+Q M+ E D
Sbjct: 65 SFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEAD 124
Query: 243 ADGNGTIDFPEFLTMMARK 299
+G+ D+ +F+ + K
Sbjct: 125 PTNSGSFDYYDFVQRIMAK 143
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 121 bits (291), Expect = 7e-29
Identities = 57/143 (39%), Positives = 85/143 (59%)
Frame = +3
Query: 81 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 260
++TEEQ + EAF LFD D D I EL MR+LG N ++E+ ++ + D G G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGY 89
Query: 261 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 440
+ +F+ +M K+ + D EEI+ AF +FD D G IS LR V L E + D+E++
Sbjct: 90 LQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELE 149
Query: 441 EMIREADIDGDGQVNYEEFVTMM 509
MI E D+D DG++N +EF+ +M
Sbjct: 150 AMIEEFDLDQDGEINEQEFIAIM 172
Score = 50.0 bits (114), Expect = 2e-07
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +3
Query: 312 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 491
+ ++I EAF++FD D + I ELR M LG EV +++R+ D G G + E
Sbjct: 34 EQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQME 93
Query: 492 EFVTMMT 512
+FV +MT
Sbjct: 94 DFVRVMT 100
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 110 bits (264), Expect = 1e-25
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 2/136 (1%)
Frame = +3
Query: 108 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 287
+K+AFSLFD+ G G I +G ++R+ GQNPT AE+ ++ + + A+ +D +FL +
Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE----VDMEQFLQV 63
Query: 288 MARKMK-DTDSE-EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 461
+ R D + EE + F+VFDKD G I ELR+V+T+LGEKL++EE+DE+++
Sbjct: 64 LNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP 123
Query: 462 IDGDGQVNYEEFVTMM 509
+ DG VNY +FV M+
Sbjct: 124 VK-DGMVNYHDFVQMI 138
Score = 41.9 bits (94), Expect = 5e-05
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +3
Query: 105 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 284
EF + F +FDKD G I EL V+ SLG+ + E+ +++ V +G +++ +F+
Sbjct: 78 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQ 136
Query: 285 MM 290
M+
Sbjct: 137 MI 138
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 87.0 bits (206), Expect = 1e-18
Identities = 49/140 (35%), Positives = 77/140 (55%)
Frame = +3
Query: 81 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 260
QLT QI E KEAF+L DKDGDG I +++ T++ SL Q+ +E D IN + N
Sbjct: 41 QLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASE----DSINHMFESINPP 96
Query: 261 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 440
I+ FLT M + ++ EAF FD +G I + +R ++++G+++ +EV+
Sbjct: 97 INLAAFLTAMGSMLCRISPRNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVE 156
Query: 441 EMIREADIDGDGQVNYEEFV 500
++R G YE+FV
Sbjct: 157 SILR--SYTSHGVFYYEKFV 174
Score = 28.3 bits (60), Expect = 0.72
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +3
Query: 372 ISAAELRHVMTNLGEKLTDEEVDEMIREA----DIDGDGQVNYEEFVTMMTS 515
++A + + +LT ++ E+ +EA D DGDG + E+ TM+TS
Sbjct: 26 VAAQAAKRASSGAFAQLTSSQIQEL-KEAFALLDKDGDGNIGREDVKTMLTS 76
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 79.4 bits (187), Expect = 3e-16
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Frame = +3
Query: 87 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 266
+ E+I ++ F D + G+I E ++ S+ NP + L + VD DG G +D
Sbjct: 19 SNEEIERIRKRFIKIDANQSGSIDRNEFLSIP-SVASNPLASRL---FSVVDEDGGGDVD 74
Query: 267 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDE 431
F EF+ ++ + EE+++ AF+++D D +G+IS EL V+ TNL E +
Sbjct: 75 FQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQ 134
Query: 432 EVDEMIREADIDGDGQVNYEEF 497
VD+ I E D D DG++++EEF
Sbjct: 135 IVDKTIMEVDKDRDGKISFEEF 156
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 46.0 bits (104), Expect = 3e-06
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 288 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 467
M+ K + +EE EAF +FD G+I +LR LGE LT E++ M+ D+
Sbjct: 1 MSVSTKRLEMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLML---DLA 57
Query: 468 G-DGQVNYEEFVTM 506
G +G+V+ EEF +
Sbjct: 58 GTNGKVSREEFAEL 71
Score = 34.7 bits (76), Expect = 0.008
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +3
Query: 93 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 272
E E +EAF LFD G I ++L LG+N T+ +LQ M++ A NG +
Sbjct: 9 EMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDL--AGTNGKVSRE 66
Query: 273 EF 278
EF
Sbjct: 67 EF 68
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 45.2 bits (102), Expect = 6e-06
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Frame = +3
Query: 225 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV-- 398
+ N DAD NG IDF EF+ ++ + + +++ AF+++D D NG IS E+ +
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRG-ELNDKLIWAFQLYDLDNNGLISYDEMLRIVD 126
Query: 399 ----MTNLGEKLTDEE------VDEMIREADIDGDGQVNYEEF 497
M KL ++E V+++ D + DGQ+ EEF
Sbjct: 127 AIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
Score = 31.1 bits (67), Expect = 0.10
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +3
Query: 252 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 431
+G ++ EF + + D F VFD D NG+I E ++ ++
Sbjct: 40 SGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELND 99
Query: 432 EVDEMIREADIDGDGQVNYEEFVTMM 509
++ + D+D +G ++Y+E + ++
Sbjct: 100 KLIWAFQLYDLDNNGLISYDEMLRIV 125
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 36.7 bits (81), Expect = 0.002
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +3
Query: 216 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 395
L D N++D DG G +D P T+ A + S +E+REA R + D +G + +
Sbjct: 21 LTDQFNKLDVDGKGYLDQP--TTIKAFEDSKKGSYDEVREAIREVNVDSSGRVEPEDFVG 78
Query: 396 VMTNLGEKLTDEEV 437
+ L + + EV
Sbjct: 79 IFNVLKKGVEGTEV 92
Score = 35.9 bits (79), Expect = 0.004
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 288 MARKMKDTDSEE--EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 461
+ +K + +EE + + F D DG G++ + +K + +EV E IRE +
Sbjct: 6 LQKKYPELTNEEILTLTDQFNKLDVDGKGYLDQPTTIKAFED-SKKGSYDEVREAIREVN 64
Query: 462 IDGDGQVNYEEFV 500
+D G+V E+FV
Sbjct: 65 VDSSGRVEPEDFV 77
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 35.5 bits (78), Expect = 0.005
Identities = 19/68 (27%), Positives = 39/68 (57%)
Frame = +3
Query: 306 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 485
D + + E FR + + NG++S ++ V+ + KL+ ++++++ ADID DG +
Sbjct: 2 DPQEKNKYWEIFRGLNPE-NGYLSGSKAAGVLRS--SKLSSDKLEKIWDLADIDDDGMFD 58
Query: 486 YEEFVTMM 509
++EF M
Sbjct: 59 FDEFAIAM 66
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.1 bits (67), Expect = 0.10
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -2
Query: 473 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAE 339
V++ I L ++ L+ FLSE + +G+ DEA+ V+ ++AE
Sbjct: 180 VSIGINLLWGIITLVGVSFLSESPRYLVSIGKDDEAIQVMCKNAE 224
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.5 bits (63), Expect = 0.31
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -2
Query: 473 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAEGLAD 327
V++ I L ++ ++ FL E + Q+G+ +EAV VL E AE D
Sbjct: 184 VSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAELFPD 232
>SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 409
Score = 28.7 bits (61), Expect = 0.55
Identities = 18/81 (22%), Positives = 35/81 (43%)
Frame = +3
Query: 210 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 389
A +++ V + N ID E + K+ + ++ E V +DG+ I+ E
Sbjct: 318 ARYNELVQAVSSSSNSEIDEVEDAETIDSKILEKRNDLNNEEPNSVVAEDGSEIITLDEN 377
Query: 390 RHVMTNLGEKLTDEEVDEMIR 452
EKL D +++E ++
Sbjct: 378 DQSPNEATEKLRDNDLEESLK 398
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 28.3 bits (60), Expect = 0.72
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 78 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEV 239
D+ E A + +S+FD+D +G IT +E+ +G + A L+D+ + +
Sbjct: 538 DETGEVDNATLEACYSIFDRDLNGDITCEEIELACVEIGKERKSISASLRDLNDSI 593
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 28.3 bits (60), Expect = 0.72
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 228 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 356
I+E D + NG + F + + +KD+ EE+ ++F + D+
Sbjct: 545 ISESDDESNGDMIRDSFDRLSSESIKDSQKTEELHDSFGINDE 587
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 396 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 494
V + E+ +EE DEM E D +G+G EE
Sbjct: 170 VQPDADEEEEEEEADEMEEEFDEEGEGDEEEEE 202
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 291 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 467
AR++K I + ++ D+ + +A EL V LG+ +TD VDE +A+++
Sbjct: 113 ARQLKSQSKNVSIEKIEKLQDEIQDYMDAAGELNEV---LGQNMTDINVDEEELDAELE 168
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +3
Query: 348 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 461
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAE 521
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 2.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 222 LEVRLLWGSVLATSSRCPALWS*WCHR 142
LE++ WGS+ A + +W+ W R
Sbjct: 850 LEMKNYWGSISALCDKMSEIWADWVQR 876
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +3
Query: 348 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 461
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAE 521
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 26.2 bits (55), Expect = 2.9
Identities = 19/85 (22%), Positives = 31/85 (36%)
Frame = +3
Query: 114 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 293
+ F FD+D DG + +EL + R P N + +G + + +L +
Sbjct: 311 DLFYQFDRDNDGALNNEELSALFRHTPGLPEIWVSSQFPNSTVLNEHGYVTYNGWLAQWS 370
Query: 294 RKMKDTDSEEEIREAFRVFDKDGNG 368
A+ FD DG G
Sbjct: 371 MITLFDYKTTLAYLAYLGFDTDGRG 395
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 26.2 bits (55), Expect = 2.9
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 150 TITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 326
T + GT+ S+G + E + ++++ T DFPE L+ +++ EE
Sbjct: 545 TTSLHPFGTLYESIGTIGDPKVEYKAILHDFSCH---TYDFPESLSHCVKRLPTPIPAEE 601
Query: 327 IREAFRVFDK 356
+++ + + DK
Sbjct: 602 LQKRYNLRDK 611
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 485 IDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 384
+D++V +D+ +H L S LS HDV Q+
Sbjct: 28 VDVSVDIDVIFPDHTQTLSFSLLLSNTIHDVRQV 61
>SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 484
Score = 25.0 bits (52), Expect = 6.7
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 237 VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 416
V DG+ +P F +A+ KD EE + + +DG+G A L + G+
Sbjct: 414 VGTDGSVYNLYPRFKDRLAQAFKDILGEEIGSKVVTIPAEDGSGV--GAALVSALEAKGK 471
Query: 417 KLTDEEVDEMIR 452
LT + + E ++
Sbjct: 472 ALTSDILAEHLK 483
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 6.7
Identities = 9/38 (23%), Positives = 19/38 (50%)
Frame = +3
Query: 222 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIRE 335
D + + + T + PE + ++ K+KD + E + E
Sbjct: 479 DCLEVLQISVDDTSNIPEIIARLSEKLKDREESEAVTE 516
>SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 783
Score = 24.6 bits (51), Expect = 8.9
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +3
Query: 207 EAELQDMINEVDADGNGTIDFPEFLT--MMARKMKDTDSEEEIREAFRVFDKDGNGFISA 380
E L+ +N + + N ++D P FL MM + + EIR A FD G F
Sbjct: 281 ETLLRYRLNLIMSFQNPSVD-PGFLCLLMMIFALGSMFAHMEIRSASNPFDNPGKQFFDT 339
Query: 381 AEL 389
A L
Sbjct: 340 ARL 342
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = -2
Query: 137 FVEQ*ECLLKLGDLFFRQLIRHCRLTWIIWSYTKKSQ 27
F E EC+ L ++ + C+ W I+S+ S+
Sbjct: 1113 FCEPLECVETLVQIYLENNVECCQCIWDIFSFLSDSE 1149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,665,115
Number of Sequences: 5004
Number of extensions: 30014
Number of successful extensions: 158
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -