Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31807
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   1.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.8  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 125 DFGLFGXLRLLETLFFIIRHCCCVGLGC 42
           D  L   LR  E +F  +  CC V  GC
Sbjct: 81  DSDLQQKLRYFEEVFSSLLSCCSVIFGC 108


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 125 DFGLFGXLRLLETLFFIIRHCCCVGLGC 42
           D  L   LR  E +F  +  CC V  GC
Sbjct: 81  DSDLQQKLRYFEEVFSSLLSCCSVIFGC 108


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 375 DYHERIARLEDEKFDLEYIVKR 440
           DYH    R     F +EY+V R
Sbjct: 835 DYHGAWERQTGHNFTMEYLVSR 856


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,043
Number of Sequences: 336
Number of extensions: 1254
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)