Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31805
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4BVV5 Cluster: Putative uncharacterized protein; n=2; ...    32   8.9  
UniRef50_Q0K3W0 Cluster: Zn-dependent alcohol dehydrogenase; n=1...    32   8.9  

>UniRef50_Q4BVV5 Cluster: Putative uncharacterized protein; n=2;
           Chroococcales|Rep: Putative uncharacterized protein -
           Crocosphaera watsonii
          Length = 263

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = -2

Query: 275 HGNRTRYFPQVTSYAPKLTRNEKKKTSQSTNTRL---NTMWHCKVILKII*DCFF 120
           H  RT+   +V  Y PKL+  +K +  Q  N  L   N M   +   K+I DC +
Sbjct: 151 HSKRTKSSAKVVQYFPKLSEAQKLEIEQKKNIMLLLENLMEREEATFKMIIDCLY 205


>UniRef50_Q0K3W0 Cluster: Zn-dependent alcohol dehydrogenase; n=1;
           Ralstonia eutropha H16|Rep: Zn-dependent alcohol
           dehydrogenase - Ralstonia eutropha (strain ATCC 17699 /
           H16 / DSM 428 / Stanier 337)(Cupriavidus necator (strain
           ATCC 17699 / H16 / DSM 428 / Stanier337))
          Length = 357

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 243 NLRKVPGSIPVPGAGDDIMHTSMMMVNYKFL 335
           NLR+V   IPVPG G+ ++    + +NY+ L
Sbjct: 37  NLRRVDAPIPVPGPGEVLVRVHAVALNYRDL 67


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 363,245,777
Number of Sequences: 1657284
Number of extensions: 5393842
Number of successful extensions: 12818
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12815
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)