Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31805
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.6  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   6.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   6.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.5  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   6.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 278 WHGNRTRYFPQVTSYAPKLTRN 213
           WH   ++ FP V+   P+L +N
Sbjct: 274 WHLTDSQSFPLVSQRVPQLAKN 295


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 320 YHHH*SMHNVVACPWHGNRTRYFPQVTSY 234
           YH+H + ++ V    +G    Y PQ+ S+
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 320 YHHH*SMHNVVACPWHGNRTRYFPQVTSY 234
           YH+H + ++ V    +G    Y PQ+ S+
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory
          receptor candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 17 PXKFTYLQTLSCIA*IFFLYEI*GIF 94
          P KF    T +C+  +  L +I G+F
Sbjct: 16 PPKFELPTTHNCLKKVLLLSQIVGVF 41


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 320 YHHH*SMHNVVACPWHGNRTRYFPQVTSY 234
           YH+H + ++ V    +G    Y PQ+ S+
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 320 YHHH*SMHNVVACPWHGNRTRYFPQVTSY 234
           YH+H + ++ V    +G    Y PQ+ S+
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNYYHPQLHSH 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,298
Number of Sequences: 336
Number of extensions: 1605
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)