Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31804
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q11R28 Cluster: A-glycosyltransferase-related protein, ...    33   5.1  
UniRef50_A5K8R5 Cluster: Putative uncharacterized protein; n=3; ...    32   6.8  

>UniRef50_Q11R28 Cluster: A-glycosyltransferase-related protein,
           glycosyltransferase family 4 protein; n=1; Cytophaga
           hutchinsonii ATCC 33406|Rep:
           A-glycosyltransferase-related protein,
           glycosyltransferase family 4 protein - Cytophaga
           hutchinsonii (strain ATCC 33406 / NCIMB 9469)
          Length = 399

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +1

Query: 43  LHKLNIRDKXRGTGITSFGGFMFLFVKLFINNKIITNLHLFI*NALKFNWKMQQ-NYIIT 219
           +H L   D     G++  GG M  F+K F N KII N+           WK  + NY I 
Sbjct: 80  IHALFYADALIVLGVS--GGIMIPFIKFFTNKKIIVNID-------GLEWKRDKWNYFIR 130

Query: 220 KHSKL 234
           K+ KL
Sbjct: 131 KYLKL 135


>UniRef50_A5K8R5 Cluster: Putative uncharacterized protein; n=3;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 2235

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 103  FMFLFVKLFINNKIITNLHLFI*NALKFNWKMQQ---NYIITKHSKLRTNCT*IIISRRH 273
            F  +  KL +N K I N+H  + NALK   K ++   +Y+  K  KL   C  I   +R+
Sbjct: 1157 FQNIVDKLHLNLKFIENIHFTLNNALKSKKKKKKKFLHYLCVKDQKLEDICNSIENLKRN 1216

Query: 274  I 276
            I
Sbjct: 1217 I 1217


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,487,608
Number of Sequences: 1657284
Number of extensions: 5852085
Number of successful extensions: 8683
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8681
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)