Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31803
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22177-3|CAA80148.1| 76|Caenorhabditis elegans Hypothetical pr... 78 4e-15
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC006629-10|ABC48257.1| 312|Caenorhabditis elegans Hypothetical... 29 2.6
AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical ... 28 4.6
AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical ... 28 4.6
AC087081-6|AAG37976.1| 301|Caenorhabditis elegans Hypothetical ... 28 4.6
AF022975-10|AAB70668.2| 661|Caenorhabditis elegans Hypothetical... 27 6.0
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 27 8.0
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 27 8.0
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 27 8.0
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 27 8.0
AF000298-1|AAC48257.2| 229|Caenorhabditis elegans Pcna (prolife... 27 8.0
>Z22177-3|CAA80148.1| 76|Caenorhabditis elegans Hypothetical
protein ZK512.4 protein.
Length = 76
Score = 77.8 bits (183), Expect = 4e-15
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +2
Query: 215 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 394
MT+ +W+EF KAAE L+ +P R+ KY+H+KG +K+TD+ CLQY T QDV+
Sbjct: 1 MTYFTSWDEFAKAAERLHSANPEKCRFVTKYNHTKGQLVLKLTDDVVCLQYSTNQLQDVK 60
Query: 395 KIDKFMSNLLR 427
K++K S LLR
Sbjct: 61 KLEKLSSTLLR 71
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 224 VPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFN 331
+P +E FE+ + + D +N Y H K FN
Sbjct: 151 IPKYENFERLGTEIPIADLVNLTMGELYEHLKAVFN 186
>AC006629-10|ABC48257.1| 312|Caenorhabditis elegans Hypothetical
protein F12E12.8 protein.
Length = 312
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/34 (29%), Positives = 24/34 (70%)
Frame = -2
Query: 272 VDITFPRLSQTLPNLEQKSLRPIIDYSLEMFLKI 171
++IT+ + +T+ NLE S+R +I++ + +F ++
Sbjct: 86 IEITYENVKRTIRNLEGYSVRSVIEHFMAIFDRV 119
>AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical
protein C02E11.1b protein.
Length = 1123
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 185 FLVNSQ*LAVMTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQ 364
F ++ L V T + F A LY I+ ++K S+G+ NV T N KC
Sbjct: 191 FKISGYQLEVHTRTESMNPFVDAVMTLYATSSIDLP-NIKCVGSEGSLNVPSTHNVKCSI 249
Query: 365 YKTE 376
KT+
Sbjct: 250 GKTD 253
>AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical
protein C02E11.1a protein.
Length = 1121
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 185 FLVNSQ*LAVMTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQ 364
F ++ L V T + F A LY I+ ++K S+G+ NV T N KC
Sbjct: 189 FKISGYQLEVHTRTESMNPFVDAVMTLYATSSIDLP-NIKCVGSEGSLNVPSTHNVKCSI 247
Query: 365 YKTE 376
KT+
Sbjct: 248 GKTD 251
>AC087081-6|AAG37976.1| 301|Caenorhabditis elegans Hypothetical
protein Y82E9BL.11 protein.
Length = 301
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/32 (37%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +2
Query: 245 EKAAEMLYLQDPIN-TRYSVKYSHSKGAFNVK 337
E+A ++L + DP + +RY ++YS+ +G F +K
Sbjct: 252 EEADDILKIFDPDSPSRYEIEYSNDQGKFAIK 283
>AF022975-10|AAB70668.2| 661|Caenorhabditis elegans Hypothetical
protein K09C6.1 protein.
Length = 661
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 305 YSHSKGAFNVKITDNKKCLQYKTEVQ-QDVRKIDKF 409
+S ++ FN+KITD +C+ K E++ D + D F
Sbjct: 179 FSVNQHPFNIKITDYSRCMTRKPEMKVPDDARPDSF 214
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 37 INKKSTYIST*LKFPDYNLSVYPICN*CVRRAYIAYCSVPTYS 165
IN + IST F Y + N C R ++ C+V YS
Sbjct: 400 INFQVEEISTQPNFDHYTIKPAKSANACARFCFVGLCTVAVYS 442
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 37 INKKSTYIST*LKFPDYNLSVYPICN*CVRRAYIAYCSVPTYS 165
IN + IST F Y + N C R ++ C+V YS
Sbjct: 400 INFQVEEISTQPNFDHYTIKPAKSANACARFCFVGLCTVAVYS 442
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 37 INKKSTYIST*LKFPDYNLSVYPICN*CVRRAYIAYCSVPTYS 165
IN + IST F Y + N C R ++ C+V YS
Sbjct: 400 INFQVEEISTQPNFDHYTIKPAKSANACARFCFVGLCTVAVYS 442
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 37 INKKSTYIST*LKFPDYNLSVYPICN*CVRRAYIAYCSVPTYS 165
IN + IST F Y + N C R ++ C+V YS
Sbjct: 400 INFQVEEISTQPNFDHYTIKPAKSANACARFCFVGLCTVAVYS 442
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 37 INKKSTYIST*LKFPDYNLSVYPICN*CVRRAYIAYCSVPTYS 165
IN + IST F Y + N C R ++ C+V YS
Sbjct: 400 INFQVEEISTQPNFDHYTIKPAKSANACARFCFVGLCTVAVYS 442
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 37 INKKSTYIST*LKFPDYNLSVYPICN*CVRRAYIAYCSVPTYS 165
IN + IST F Y + N C R ++ C+V YS
Sbjct: 400 INFQVEEISTQPNFDHYTIKPAKSANACARFCFVGLCTVAVYS 442
>AF000298-1|AAC48257.2| 229|Caenorhabditis elegans Pcna
(proliferating cell nuclearantigen) homolog protein 1
protein.
Length = 229
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 209 AVMTFVPNWE-EFEKAAEMLYLQDPINTRYSVKY 307
+V+T+ P+ + E A L ++DP+N +S+KY
Sbjct: 145 SVVTYSPSSNTDDETEAVTLEVKDPVNVNFSIKY 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,787,657
Number of Sequences: 27780
Number of extensions: 215040
Number of successful extensions: 586
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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