Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31795
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XUD4 Cluster: Putative uncharacterized protein; n=1; ...    34   2.2  
UniRef50_A0EGF3 Cluster: Chromosome undetermined scaffold_95, wh...    32   6.8  
UniRef50_Q21346 Cluster: Cullin-6; n=1; Caenorhabditis elegans|R...    32   6.8  
UniRef50_Q7RP05 Cluster: Acyl CoA binding protein, putative; n=8...    32   8.9  

>UniRef50_Q4XUD4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 59

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = +1

Query: 307 YLYKYMIDSNYDIFLHNNIS*LYSAXYFLNILYITYFYSRLLL*FAFNFT*IH-IEIVVS 483
           Y++KY++ + YD+FL   ++ +Y+  +FL I Y   F       F F F  IH +++ +S
Sbjct: 2   YIWKYLLRNFYDLFL---VACIYTCIFFLKIFYFLSFCY-----FCFGFIIIHKMQLTIS 53

Query: 484 L 486
           +
Sbjct: 54  M 54


>UniRef50_A0EGF3 Cluster: Chromosome undetermined scaffold_95, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_95,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1621

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
 Frame = +3

Query: 27  TYVKLQTFSINFTQL*NKCFLFFDKFILKS*RFI*KGTN*HYKIKQ---KKLNYWSCNVI 197
           +YV    FS+   Q+ N   L FDKF +   ++I + TN HY+I+    KK +  +  V 
Sbjct: 485 SYVDFMRFSLTTQQVINNPILQFDKFTINY-KYIKQQTNDHYQIQTFSLKKPDLQNYFVF 543

Query: 198 VVVDGET 218
              +GE+
Sbjct: 544 AAYEGES 550


>UniRef50_Q21346 Cluster: Cullin-6; n=1; Caenorhabditis elegans|Rep:
           Cullin-6 - Caenorhabditis elegans
          Length = 729

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -2

Query: 269 DGINLLLIRDHSSMKSESLTIDN-YNDITTPIIXXXXXXXXXXVSTFLYKPL 117
           DG+NLL  R+H S K   +  D  YN  TT  +           S FLYK L
Sbjct: 12  DGLNLLYRREHMSKKYYMMLYDAVYNICTTTTLANSNNNSPEFASEFLYKQL 63


>UniRef50_Q7RP05 Cluster: Acyl CoA binding protein, putative; n=8;
           Plasmodium|Rep: Acyl CoA binding protein, putative -
           Plasmodium yoelii yoelii
          Length = 160

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 384 LFFKYSLYYILLFPLI-TLICVQFHLNTY*NCSFFIY 491
           LF+ YS++ IL F  + T + V  HLNTY   S F++
Sbjct: 7   LFYMYSIFDILYFFYVYTPVLVNIHLNTYYYFSIFLH 43


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,135,262
Number of Sequences: 1657284
Number of extensions: 5791269
Number of successful extensions: 10394
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10389
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)