Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31795
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.13 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   6.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +1

Query: 370 LYSAXYFLNILYITYFYSRLLL*FAFNFT*IHIEIVVSLYTLQCVLVML 516
           L++    L +    ++Y  LL   AF    +H+  ++ +Y   C L++L
Sbjct: 247 LFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIIL 295



 Score = 25.0 bits (52), Expect = 0.40
 Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +3

Query: 366 LII*CXLFFKYSLYYILLFPLITLICVQ--FHLNTY*NCSFFIYT 494
           +I+ C  +F Y+ + +    L+ L+C+   ++++    C+F I+T
Sbjct: 233 IILLCIYYFYYA-FILFTVHLLLLVCIYYFYYMHLLFCCAFIIFT 276


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 44  NILNKLYTTVK*MFFVF**IYTQKLKV 124
           +I+N  YT  K M F    IYT  L++
Sbjct: 167 SIINFGYTLAKFMIFTSTCIYTNLLRI 193


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 64  VKFIENVCNFTY 29
           + FIEN C F Y
Sbjct: 135 LSFIENYCQFLY 146


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 310 LYKYMIDSNYDIFL 351
           +Y Y  D+N+++FL
Sbjct: 158 VYVYCCDNNFNVFL 171


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 5/20 (25%), Positives = 14/20 (70%)
 Frame = +3

Query: 147 HYKIKQKKLNYWSCNVIVVV 206
           H+  ++KK ++W+  + +V+
Sbjct: 128 HHAPEEKKRSFWAVTIFLVL 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,001
Number of Sequences: 336
Number of extensions: 1834
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)