Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31794
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    24   0.70 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.1  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   6.5  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   8.6  

>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +3

Query: 234 KDGXESVLQQLNAXAKSLQGALGDXNGKXKEALEQSRQNIERTAEELRKGHPDVEKNATA 413
           KD  E++LQ++       +  LGD + K   +  Q+ + +ER  +E  + +P V   + A
Sbjct: 16  KDVQETILQEM-------RDVLGDIHAKPTYSDLQNLKYLERCIKESLRLYPSVHLISRA 68

Query: 414 LREKLQ 431
           L E ++
Sbjct: 69  LGEDVR 74


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 430 CSFSRRAVAFFSTSGWPLRSSSAVRSMFCLDCSKA 326
           C    ++ A  ST    LR+ S  +   C+DC+K+
Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKS 286


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 397 STSGWPLRSSSAVRSMFCLDCSKA 326
           ST    LR+ S  +   C+DC+K+
Sbjct: 7   STLKTHLRTHSGEKPYRCIDCNKS 30


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 360 TAEELRKGHPDVEKNATA 413
           + EEL+K  PD  KN  A
Sbjct: 54  SGEELKKDIPDALKNECA 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,652
Number of Sequences: 336
Number of extensions: 1458
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)