Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31794
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0180 + 2034021-2034023,2034741-2035088 33 0.10
02_04_0315 - 21969416-21970756 29 1.7
11_01_0727 - 6010537-6010548,6011029-6011606,6011709-6011774,601... 29 2.2
01_06_0568 + 30305008-30305170,30305277-30305341,30306599-303067... 29 2.9
09_04_0532 + 18386593-18386722,18386826-18386900,18387098-183875... 28 3.9
05_04_0288 + 19839597-19839821,19841882-19842107,19842494-198425... 28 3.9
12_01_0090 + 717524-719080 28 5.1
11_01_0089 + 670597-672210 28 5.1
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 27 6.8
04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756... 27 6.8
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 27 6.8
02_04_0639 + 24662786-24663451 27 8.9
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 27 8.9
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 33.5 bits (73), Expect = 0.10
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 237 DGXESVLQQLNAXAKSLQGALGDXNGKXKEALEQSRQNIERTAEELRKGHPDVEKNATAL 416
D + ++ LN L + + N EALE+ QN+ R EE +K H +++K L
Sbjct: 24 DAHKDQVKGLNGRISKLNDTIKELNDTI-EALERQVQNLTRYKEEKQKQHANLQKEFAEL 82
Query: 417 REK---LQAAVQN 446
K L AA +N
Sbjct: 83 ERKYRDLDAAHRN 95
>02_04_0315 - 21969416-21970756
Length = 446
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 261 QLNAXAKSLQGALGDXNGKXKEALEQSRQNIERTAEELRKGHPDVEKNATALREKLQAAV 440
Q N L + D NG + ALE++ + + E L + K A+ EK ++A+
Sbjct: 232 QENVELAELHRVVDDENGSLRRALERAVEEVNAANESLELATGENSKLQDAVAEK-ESAM 290
Query: 441 QNTVQESHKL 470
+ QE+ L
Sbjct: 291 EALRQENESL 300
>11_01_0727 -
6010537-6010548,6011029-6011606,6011709-6011774,
6011867-6011964,6013238-6013608
Length = 374
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 15 PPHSVSRQYIMAAKFVVLFACIALAQGSDGATR 113
PPH VSR ++ AA F A A A+G D R
Sbjct: 41 PPHQVSRPWLPAAGFRSSAAASAAARGDDYGRR 73
>01_06_0568 +
30305008-30305170,30305277-30305341,30306599-30306769,
30307409-30307978,30308085-30308444,30308496-30308774
Length = 535
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 47 GRQVRSSLRLHRSGPRERWCDATLP 121
G Q++ S LH SGPR+ W + P
Sbjct: 487 GEQLQRSAVLHFSGPRKPWLEVAFP 511
>09_04_0532 +
18386593-18386722,18386826-18386900,18387098-18387510,
18387682-18387688,18387944-18388005,18388046-18388341,
18388456-18388813,18388916-18389491,18389956-18390231
Length = 730
Score = 28.3 bits (60), Expect = 3.9
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +3
Query: 132 GHRTPHQGSSIRTLEQQFNSLTKSKDAQDFSKXWKDGXESVLQQLNAXAKSLQGALGDXN 311
GH T ++IRT++ Q T S G ++L A + +Q LGD
Sbjct: 266 GHSTTSPDATIRTIKDQLTRATTY-----LSLVASRGNHGFARELRARMRDIQRVLGDAT 320
Query: 312 GKXKEALEQSRQNIERTAEELRKGHPDVEKNATALREKLQAAVQNTVQ--ESHK 467
+ + I + L KG ++ + AL +L+A + +T + +SHK
Sbjct: 321 -SGGQLPQNVLSKIRAMEQTLGKGKRILDSCSGAL-NRLRATLHSTEERLQSHK 372
>05_04_0288 +
19839597-19839821,19841882-19842107,19842494-19842582,
19845184-19845387,19845463-19845717,19845796-19846011,
19846611-19846766,19846880-19847039,19847702-19847788,
19847789-19847940,19848006-19848143,19848714-19848788,
19849166-19849444
Length = 753
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 321 KEALEQSRQNIERTAEELRKGHPDVEKNATALREK 425
++ +EQ+R+ E EEL G D+EK +AL E+
Sbjct: 209 RKKVEQTRKQKEDLIEELSFGELDIEKILSALGER 243
>12_01_0090 + 717524-719080
Length = 518
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 304 SPSAPWRLLAKALSCCSTDSXPSFQXLLKSCA 209
+PS+ L A SC P+F LLKSCA
Sbjct: 81 APSSALLLFNHASSCSLPTPLPTFPALLKSCA 112
>11_01_0089 + 670597-672210
Length = 537
Score = 27.9 bits (59), Expect = 5.1
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = -3
Query: 379 LRSSSAVRSMFCLDCSKASLXXPFXSPSAPWRLLAKALSCCSTDSXPSFQXLLKSCA 209
L +S AV S L C +PS+ L A SC P+F LLKSCA
Sbjct: 129 LEASPAVLSP-SLVCPVIVAFSSSPAPSSALILFNHASSCSLPTPLPTFPALLKSCA 184
>05_07_0116 - 27785083-27786123,27786201-27786278,27786364-27786976,
27787128-27787213,27787316-27787438,27787600-27787734,
27787930-27788019,27788796-27788981,27789560-27789661,
27789787-27789900,27790010-27790153,27790260-27790325,
27790895-27791056,27791668-27791916
Length = 1062
Score = 27.5 bits (58), Expect = 6.8
Identities = 22/92 (23%), Positives = 43/92 (46%)
Frame = +3
Query: 162 IRTLEQQFNSLTKSKDAQDFSKXWKDGXESVLQQLNAXAKSLQGALGDXNGKXKEALEQS 341
+ +LEQ+ + + K+ + + S +Q L + ++ + A + N + EAL
Sbjct: 862 VSSLEQRVDE--REKEIDEMMQRSNQQRSSTVQVLESLLETEREACAEAN-RRAEALSLQ 918
Query: 342 RQNIERTAEELRKGHPDVEKNATALREKLQAA 437
Q + + L++ V N TAL KL+A+
Sbjct: 919 LQATQSKLDMLQQELTSVRFNETALDSKLKAS 950
>04_04_1509 - 34074206-34074398,34074506-34074777,34075411-34075608,
34076092-34076187,34076318-34076500,34076597-34076799,
34076887-34077013,34077098-34077292,34077400-34077540,
34077669-34077812,34077876-34078040,34078776-34078976,
34079049-34079195,34079275-34079427,34079731-34079833,
34079954-34080069,34080168-34080349,34080442-34080541,
34081200-34081527,34081605-34081834,34081979-34082110,
34082787-34082859,34083274-34083338
Length = 1248
Score = 27.5 bits (58), Expect = 6.8
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +3
Query: 156 SSIRTLEQQFNSLTKSKDAQDFSKXWKDGXESVLQQLNAXAKSLQGALGDXNGKXKEALE 335
S I LEQ+ S T+S + ES L NA +LQ +L + + + +
Sbjct: 777 SRIAELEQKLESRTRSLNVT----------ESTLALRNAEVDTLQNSLKELDELREFKAD 826
Query: 336 QSRQNIERTAEEL-RKGHPDVE-KNATALREKLQAAVQNTVQESHKLXXKVXSNVQETNE 509
R+N ++TAE L R+G +E +N + L+ NT+ E K +V ++ N+
Sbjct: 827 VDRKN-QQTAEILKRQGAQLIELENLYKQEQVLRKRYYNTI-EDMKGKIRVFCRLRPLND 884
Query: 510 K 512
K
Sbjct: 885 K 885
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 27.5 bits (58), Expect = 6.8
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +3
Query: 324 EALEQSRQNIERTAEELRKGHPDV-EKNATALRE--KLQAAVQNTVQESHKLXXKVXSNV 494
+ + + QN+E EL K H D+ E+ + L E KLQ ++ +E + L S +
Sbjct: 558 DRISDTLQNLEAHYAELEKRHSDLQEEKGSVLDEVIKLQEQIRFERKEHNDLEHSRKSQL 617
Query: 495 QETNEKL 515
+EK+
Sbjct: 618 DALHEKI 624
>02_04_0639 + 24662786-24663451
Length = 221
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 354 ERTAEELRKGHPDVEKNATALREKLQAAVQNTVQESHKL 470
ER AEELR+G V+ T ++ +Q ++ H++
Sbjct: 142 ERLAEELRRGDAAVDVTLTTPARYCRSCMQTVIECKHRV 180
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +3
Query: 321 KEALEQSRQNIERTAEELR-KGHPDVEKNATALREKLQAAVQNTVQESHKLXXKVXSNVQ 497
K+ +QS ERT E + K H ++ K E +QAA +QE VQ
Sbjct: 416 KQDAKQSDPKKERTVSEAKEKAHDEMNKGRAYGNETVQAASVKQMQEEQFPMSLADQKVQ 475
Query: 498 ET 503
T
Sbjct: 476 AT 477
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,208,479
Number of Sequences: 37544
Number of extensions: 202062
Number of successful extensions: 986
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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