Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31794
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    29   0.093
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    28   0.16 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   8.1  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 29.1 bits (62), Expect = 0.093
 Identities = 26/104 (25%), Positives = 41/104 (39%)
 Frame = +3

Query: 150  QGSSIRTLEQQFNSLTKSKDAQDFSKXWKDGXESVLQQLNAXAKSLQGALGDXNGKXKEA 329
            Q + +   E Q     K KD Q      K   E  L+      K  +    +     K+ 
Sbjct: 754  QKTIVEARETQTQCSAKVKDLQAKIADGKGHRERELKSAEEDLKRSKKKSEESRKNWKKH 813

Query: 330  LEQSRQNIERTAEELRKGHPDVEKNATALREKLQAAVQNTVQES 461
             EQ  + ++   EEL+KG    ++ A  L E++ A  Q  V+ S
Sbjct: 814  -EQDFETLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEVS 856


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 24  SVSRQYIMAAKFVVLFACIALAQGSDGATRRSRLLQGHRTPHQGSSIRTLEQQFNSLTK 200
           SV   Y++   +  L  C++ A  S     RS+  +  RTP Q S  + + +Q N+  K
Sbjct: 56  SVYSSYVLPKLYAKLHYCVSCAIHSKVVRNRSKETRRIRTPPQRSFPKDMNRQQNAQRK 114


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +3

Query: 384 HPDVEKNATALREKLQAAVQNTVQESHKLXXKVXSNVQET 503
           H + E+NA   +  L  A + TV ++H L      N   T
Sbjct: 316 HVEAERNARNAQHLLLRANRLTVSDNHNLSNSGSGNTAGT 355


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,511
Number of Sequences: 2352
Number of extensions: 6335
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)